Nucleotide Global Alignment
Description
- Query:
- TRCN0000479282
- Subject:
- XM_006530271.3
- Aligned Length:
- 2186
- Identities:
- 733
- Gaps:
- 1315
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGTAGCTCTGAGGGCGCGCCGTCCTGGGCTGTGGCTTTGCCCCCGCCGCTGCGGCCGTGCGCCTATGGCGT 74
Query 1 -------------------------------------------------------ATGAACCCTCCGGCAGCCT 19
|||||||||.||||..|||
Sbjct 75 CTCGGAGGTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCT 148
Query 20 T---CCTTGCCGGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAAGGAGCTG 90
| || ||||||||||||||||.|||||||||||||.|||||||||.|||||.||.||||||||.||.
Sbjct 149 TATACC------GGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGAGAAGCAGCGGAAGGAACTT 216
Query 91 CAGTTGCTCATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCT 164
|||.|||||||.||.||..|.|||||.||.|||||.|||||||||||||||||.||||||||.|||...|||||
Sbjct 217 CAGCTGCTCATCGGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCT 290
Query 165 TCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACTAC 238
|||.||.|||||||||||.||||||||||||.||||.|||||.||.||.||||||||..|.||||||||.||.|
Sbjct 291 TCTCTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGC 364
Query 239 ATAAAAGAACTGAAATAATCAGGTAGACT--CCAAGAAGGTAAAAGCTCTTGAATCACAATCAAATGGAATGCC 310
|||||||.|||||.|||||||.|| .||| ..||||||||.||..|.||.||.|| |||||||...||.||||
Sbjct 365 ATAAAAGGACTGACATAATCAAGT-CACTGATGAAGAAGGTCAAGACCCTGGAGTC-CAATCAAGCAGAGTGCC 436
Query 311 AAACAGCTCTCCAAAAGACCCAACTACAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTCTCTCT 384
|.||||||||.||.|||||.||.|..|||||.|||||.||||||||.|||||.||.||.||..|.||.|||||.
Sbjct 437 AGACAGCTCTTCAGAAGACGCAGCAGCAGCTCCAGGAGATGGCTCAGAAGGCCACACACTCCACCCTCCTCTCG 510
Query 385 GAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA 458
||||||||||||||||||||.||||.||||||||.||||||||||||.||.|||||.|||||||||||..|.||
Sbjct 511 GAAGACCTTGAGGCTAGAAATGAAAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA 584
Query 459 AGCTCGAGAACAAGCTCTTACGACAATGATAAAGCTAAAGGACAAAGATATTATTGAGGCAGTTAATCACATTG 532
||||.||||.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||.||.|||||||||.
Sbjct 585 AGCTAGAGAGCAGGCTCTCACTACCATGATAAAGCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTT 658
Query 533 CAGATTGTTCGGGTAAATTTAAAATGCTAGAGCATGCCCTACGTGATGCCAAGATGGCGGAGACTTGTATTGTG 606
||||.||.|||||||||||||||.||.|||||||.||..|||||||||||||||||||||||||.|||.|.|||
Sbjct 659 CAGACTGCTCGGGTAAATTTAAATTGTTAGAGCACGCTTTACGTGATGCCAAGATGGCGGAGACGTGTGTGGTG 732
Query 607 AAAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGACCTCAA 680
|.||||||||||||||||||||||||||||||||||||||.||||||||||||.|||||.||||||||.||.||
Sbjct 733 AGAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAGGATTGAAGTCAATAAACTGAAAGAGGATCTAAA 806
Query 681 TGAAAAGACGACAGAAAATAATGAGCAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCACG 754
|||.|||||.||||||||.|||||.||||||||.|||||.|||||.|||||||||||||||||.||.||.||.|
Sbjct 807 TGAGAAGACAACAGAAAACAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATG 880
Query 755 ATGAATTGCTTTTTACTGTAGAGAGAGAAAAGAGGAAAGATGAATTGCTTAATATTGCGAAGTCAAAGCAAGAA 828
||||..|..||||||||||.|||||.||||||||||||||||||||.|||.|||||||.||||||||||||||.
Sbjct 881 ATGAGCTAATTTTTACTGTTGAGAGGGAAAAGAGGAAAGATGAATTACTTGATATTGCAAAGTCAAAGCAAGAT 954
Query 829 CGCACAAATTCAGAACTGCACAATCTGAGACAGATTTATGTAAAACAACAGAGTGATCTGCAGTTTCTTAATTT 902
||.||||||||.||.||.||.|||||||||||||...|.| ||.|.|||| ||
Sbjct 955 CGTACAAATTCCGAGCTCCAGAATCTGAGACAGAGAGAAG--AAGCTACAG-GT-------------------- 1005
Query 903 CAATGTGGAAAATTCTCAGGAATTAATACAGATGTATGACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA 976
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 977 GCAGAGACATGTGTTTATCAGACCTTGAAAATAACCACCCAAAAGTCGATATTAAGAGGGAAAAAAATCAGAAG 1050
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1051 TCACTGTTTAAGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGCGATGA 1124
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1125 ATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGAGAAAAGTGTAATTAAGCTGTCATCCATATTCA 1198
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1199 CCAAAGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAACAAA 1272
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1273 ATTACATTGTGCAAGATCCACACAAAATCACCAAAATGTCATGGCACTGGGGTTCAGAACGAAGGAAAACAACC 1346
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1347 CTCAGAAACACCCACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCCTGACCAACTGTC 1420
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1421 CAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGGTCCGAAATCTCATGCTGC 1494
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1495 CAGAAAAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAAT 1568
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1569 TGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATGCAGAGAATTGTCC 1642
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1643 GCCTCAAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGCACACAACATGACTCCCCGGCAAGTGAGCTAATT 1716
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1717 GCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGATGAGACGGAGTCCTCTTCCAA 1790
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1791 TAAAAAGAACTCACCTACGAGTTTGTTAATCTACAAAGATGCACCAGCATTCAATGAAAAGGCTTCAATTGTGT 1864
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1865 TACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGGTGACG 1938
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 1939 GACCTGGAGCTGAGCACACTGCTGCCCATCAGCCATGAGAATCTCACTGGCAGTGCCACAAATAAGTCAGAGGT 2012
Sbjct 1006 -------------------------------------------------------------------------- 1005
Query 2013 CCCAGAAGAGTCAGCTCAAAAAAATACCTTTGTCAGTTAT 2052
Sbjct 1006 ---------------------------------------- 1005
