Nucleotide Global Alignment

Description

Query:
TRCN0000479282
Subject:
XM_017320780.1
Aligned Length:
2206
Identities:
1505
Gaps:
374

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGTAGCTCTGAGGGCGCGCCGTCCTGGGCTGTGGCTTTGCCCCCGCCGCTGCGGCCGTGCGCCTATGGCGT  74

Query    1  -------------------------------------------------------ATGAACCCTCCGGCAGCCT  19
                                                                   |||||||||.||||..|||
Sbjct   75  CTCGGAGGTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCT  148

Query   20  T---CCTTGCCGGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAAGGAGCTG  90
            |   ||      ||||||||||||||||.|||||||||||||.|||||||||.|||||.||.||||||||.||.
Sbjct  149  TATACC------GGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGAGAAGCAGCGGAAGGAACTT  216

Query   91  CAGTTGCTCATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCT  164
            |||.|||||||.||.||..|.|||||.||.|||||.|||||||||||||||||.||||||||.|||...|||||
Sbjct  217  CAGCTGCTCATCGGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCT  290

Query  165  TCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACTAC  238
            |||.||.|||||||||||.||||||||||||.||||.|||||.||.||.||||||||..|.||||||||.||.|
Sbjct  291  TCTCTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGC  364

Query  239  ATAAAAGAACTGAAATAATCAGGTAGACT--CCAAGAAGGTAAAAGCTCTTGAATCACAATCAAATGGAATGCC  310
            |||||||.|||||.|||||||.|| .|||  ..||||||||.||..|.||.||.|| |||||||...||.||||
Sbjct  365  ATAAAAGGACTGACATAATCAAGT-CACTGATGAAGAAGGTCAAGACCCTGGAGTC-CAATCAAGCAGAGTGCC  436

Query  311  AAACAGCTCTCCAAAAGACCCAACTACAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTCTCTCT  384
            |.||||||||.||.|||||.||.|..|||||.|||||.||||||||.|||||.||.||.||..|.||.|||||.
Sbjct  437  AGACAGCTCTTCAGAAGACGCAGCAGCAGCTCCAGGAGATGGCTCAGAAGGCCACACACTCCACCCTCCTCTCG  510

Query  385  GAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA  458
            ||||||||||||||||||||.||||.||||||||.||||||||||||.||.|||||.|||||||||||..|.||
Sbjct  511  GAAGACCTTGAGGCTAGAAATGAAAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA  584

Query  459  AGCTCGAGAACAAGCTCTTACGACAATGATAAAGCTAAAGGACAAAGATATTATTGAGGCAGTTAATCACATTG  532
            ||||.||||.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||.||.|||||||||.
Sbjct  585  AGCTAGAGAGCAGGCTCTCACTACCATGATAAAGCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTT  658

Query  533  CAGATTGTTCGGGTAAATTTAAAATGCTAGAGCATGCCCTACGTGATGCCAAGATGGCGGAGACTTGTATTGTG  606
            ||||.||.|||||||||||||||.||.|||||||.||..|||||||||||||||||||||||||.|||.|.|||
Sbjct  659  CAGACTGCTCGGGTAAATTTAAATTGTTAGAGCACGCTTTACGTGATGCCAAGATGGCGGAGACGTGTGTGGTG  732

Query  607  AAAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGACCTCAA  680
            |.||||||||||||||||||||||||||||||||||||||.||||||||||||.|||||.||||||||.||.||
Sbjct  733  AGAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAGGATTGAAGTCAATAAACTGAAAGAGGATCTAAA  806

Query  681  TGAAAAGACGACAGAAAATAATGAGCAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCACG  754
            |||.|||||.||||||||.|||||.||||||||.|||||.|||||.|||||||||||||||||.||.||.||.|
Sbjct  807  TGAGAAGACAACAGAAAACAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATG  880

Query  755  ATGAATTGCTTTTTACTGTAGAGAGAGAAAAGAGGAAAGATGAATTGCTTAATATTGCGAAGTCAAAGCAAGAA  828
            ||||..|..||||||||||.|||||.||||||||||||||||||||.|||.|||||||.||||||||||||||.
Sbjct  881  ATGAGCTAATTTTTACTGTTGAGAGGGAAAAGAGGAAAGATGAATTACTTGATATTGCAAAGTCAAAGCAAGAT  954

Query  829  CGCACAAATTCAGAACTGCACAATCTGAGACAGATTTATGTAAAACAACAGAGTGATCTGCAGTTTCTTAATTT  902
            ||.||||||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||||||||
Sbjct  955  CGTACAAATTCCGAGCTCCAGAATCTGAGACAGATTTATGTAAAACAGCAGAGTGACCTGCAGTTTCTTAATTT  1028

Query  903  CAATGTGGAAAATTCTCAGGAATTAATACAGATGTATGACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA  976
            ||||.|.||||.||||||||||||||||||.||..|||.||.|||||||||||||.|||||||.|||||.|.||
Sbjct 1029  CAATATAGAAAGTTCTCAGGAATTAATACAAATACATGGCTTAAAGATGGAGGAACCAAAGGCCCTGGAGTGCA  1102

Query  977  GCAGAGACATGTGTTTATCAGACCTTGAAAATAACCACCCAAAAGTCGATATTAAGAGGGAAAAAAATCAGAAG  1050
            |||..|||||||||||||||||||||||.||||||.||||||||.||||||||||.||.||.|.||||||||||
Sbjct 1103  GCAAGGACATGTGTTTATCAGACCTTGACAATAACTACCCAAAAATCGATATTAAAAGAGAGAGAAATCAGAAG  1176

Query 1051  TCACTGTTTAAGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGCGATGA  1124
            |||.||.||||.||.||.|..|||||.|.||||||||.||||||.|||.|||||||||||||||||||.||||.
Sbjct 1177  TCATTGGTTAAAGATCAAACGTTTGAGGTCATGTTGGCTCAGCACAATGGGTCAGACAAGAGCTCTTGTGATGC  1250

Query 1125  ATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGAGAAAAGTGTAATTAAGCTGTCATCCATATTCA  1198
            .||||.|||||||||.|.||||.|..|.||||...|.|||||.||||||||||||...||.|||||..||||.|
Sbjct 1251  TTGCAGAGAGAAGAAGCTACAGGTTAACACTGCACTCGGGGAAAAAAGTGTAATTGCTCTCTCATCTCTATTTA  1324

Query 1199  CCAAAGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAACAAA  1272
            |||||||||||.|.||.|||||.||   ..|||||||||||||.||.||||.|||||.||||||.|||||||||
Sbjct 1325  CCAAAGACTTACTGGACAAACAAAA---GTCTTGGTCTCTGGGTGGGAAAATCCAGACTGAACCGGAAAACAAA  1395

Query 1273  ATTACATTGTGCAAGATCCACACAAAATCACCAAAATGTCATGGCACTGGGG-TTCAGAAC-GAAGGAAAACAA  1344
            .||||..|.||||||.||||..||||.|||||||||||..|||| |.||||| ||| .||| ||||..||.||.
Sbjct 1396  GTTACCCTATGCAAGGTCCATGCAAAGTCACCAAAATGCGATGG-AGTGGGGCTTC-CAACGGAAGAGAAGCAG  1467

Query 1345  CCCTCAGAAACACC---CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCCTGACCAA  1415
            |.|||.|||||..|   |.|..|.|||||.|||||||||||||||||..|||..||.|||||||||||..|||.
Sbjct 1468  CTCTCGGAAACCTCCGTCTCGCTGTCTGACGAGAAGCAGTGGCATGACATCAACGTCTACCTGGGCCTTTCCAG  1541

Query 1416  CTGTCCAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGG----TCCGAAATC  1485
            ||      |.||||||||.|||||.|.||||||.|..||..|.||.||.|    |.|.|||    ||.||..||
Sbjct 1542  CT------GCTCAAAACAGCCAGACAGGCTGGACGGGGATGGCCACGACC----GCACAGGAACATCTGAGGTC  1605

Query 1486  TCATGCTGCCAGAA----AAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA  1555
            ||.||||||    |    |||||.||.||||.|.||.||.|.||.|.|||..||.|||||||||||||||||.|
Sbjct 1606  TCCTGCTGC----ACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAA  1675

Query 1556  GTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATG  1629
            |||||.||||.||.|||||||||||.||.|||.||||....||||||||||.|||||||||||||||||.|...
Sbjct 1676  GTAACATCATCATCGAAGCCCCAGGACATATGACTGATACAGAGTGGATGAATATTTTCAAGCCTTCCAGAGCA  1749

Query 1630  CAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTGTTCAGAAAGCATCTGT-GGCACA---CAACATGACTCCC  1699
            ||.||.|||||.||||.||||.|...||||||.||||||..|||    ||| .||.||   .||.||.|.|||.
Sbjct 1750  CAAAGGATTGTTCGCCACAAAACCATGTGCACTTGTTCAAGAAG----TGTCAGCGCAATGAAATATAATTCCT  1819

Query 1700  CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTG--AGAGAAGATG  1771
            |.|||||||||||.||||.|||.||...||||||.|.|.|||||||.|.|||.|||||  ||  ||||||||  
Sbjct 1820  CAGCAAGTGAGCTCATTGGCATGCAGCCTTCCCAGTGTGTGGGTTCCTTAAAGTCTGC--TGAAAGAGAAGA--  1889

Query 1772  AGACGGAGTCCTCTTCCAATAAAAAGAACTCACCTACGAGTTTGTTAATCTACAAAGATGCACCAGCATTCAAT  1845
                |||||                                                      ||||       
Sbjct 1890  ----GGAGT------------------------------------------------------CAGC-------  1898

Query 1846  GAAAAGGCTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA  1919
                                                    .||||                  ||.|||.|.||
Sbjct 1899  ----------------------------------------GGCCC------------------TTCCTGACAGA  1914

Query 1920  ATCTCGTCAGATGGTGACGGACCTGGAGCTGAGCACACTGCTGCCCATCAGCC-ATGAGAATCTCACTGGCAGT  1992
            |                 |.|||                        |||||| ||||                
Sbjct 1915  A-----------------GAACC------------------------TCAGCCAATGA----------------  1931

Query 1993  GCCACAAATAAGTCAGAGGTCCCAGAAGAGTCAGCTCAAAAAAATACCTTTGTCAGTTAT  2052
                 |||.||.|.|||.|||.||||||||.|||.|.||||||..|||.||||||||.||
Sbjct 1932  -----AAAGAAATTAGAAGTCTCAGAAGAGCCAGATGAAAAAACCACCCTTGTCAGTCAT  1986

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