Nucleotide Global Alignment

Description

• Query: TRCN0000479529
• Subject: XM_017015107.1
• Aligned Length: 1194
• Identities: 670
• Gaps: 489

Alignment

Query    1  ATGGCGCTGCTGGATCTGGCCTTGGAGGGAATGGCCGTCTTCGGGTTCGTCCTCTTCTTGGTGCTGTGGCTGAT  74
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGCTGCTGGACCTGGCCTTGGAGGGAATGGCCGTCTTCGGGTTCGTCCTCTTCTTGGTGCTGTGGCTGAT  74

Query   75  GCATTTCATGGCTATCATCTACACCCGATTACACCTCAACAAGAAGGCAACTGACAAACAGCCTTATAGCAAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCATTTCATGGCTATCATCTACACCCGATTACACCTCAACAAGAAGGCAACTGACAAACAGCCTTATAGCAAGC  148

Query  149  TCCCAGGTGTCTCTCTTCTGAAACCACTGAAAGGGGTAGATCCTAACTTAATCAACAACCTGGAAACATTCTTT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCCCAGGTGTCTCTCTTCTGAAACCACTGAAAGGGGTAGATCCTAACTTAATCAACAACCTGGAAACATTCTTT  222

Query  223  GAATTGGATTATCCCAAATATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAATTGGATTATCCCAAATATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAA  296

Query  297  GAAGCTTCTTGGAAAATATCCAAATGTTGATGCTAGATTGTTTATAGGTGGCAAAAAAGTTGGCATTAATCCTA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGCTTCTTGGAAAATATCCAAATGTTGATGCTAGATTGTTTATAGGTGGCAAAAAAGTTGGCATTAATCCTA  370

Query  371  AAATTAATAATTTAATGCCAGGATATGAAGTTGCAAAGTATGATCTTATATGGATTTGTGATAGTGGAATAAGA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAATTAATAATTTAATGCCAGGATATGAAGTTGCAAAGTATGATCTTATATGGATTTGTGATAGTGGAATAAGA  444

Query  445  GTAATTCCAGATACACTTACTGACATGGTGAATCAAATGACAGAAAAAGTAGGCTTGGTTCACGGGCTGCCTTA  518
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTAATTCCAGATACGCTTACTGACATGGTGAATCAAATGACAGAAAAAGTAGGCTTGGTTCACGGGCTGCCTTA  518

Query  519  CGTAGCAGACAGACAGGGCTTTGCTGCCACCTTAGAGCAGGTATATTTTGGAACTTCACATCCAAGATACTATA  592
            ||||||||||||||||||||||||||||||||||||||||.|                                
Sbjct  519  CGTAGCAGACAGACAGGGCTTTGCTGCCACCTTAGAGCAGAT--------------------------------  560

Query  593  TCTCTGCCAATGTAACTGGTTTCAAATGTGTGACAGGAATGTCTTGTTTAATGAGAAAAGATGTGTTGGATCAA  666
                                                                                      
Sbjct  561  --------------------------------------------------------------------------  560

Query  667  GCAGGAGGACTTATAGCTTTTGCTCAGTACATTGCCGAAGATTACTTTATGGCCAAAGCGATAGCTGACCGAGG  740
               ||||          |.|.||||       ||.||                               ||.|||
Sbjct  561  ---GGAG----------TCTCGCTC-------TGTCG-------------------------------CCCAGG  583

Query  741  TTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCATATTCAATTTCTCAGTTTCAATCCA  814
            .|||||   ||||.||.|          ||.||      ||| |||||| .|.|||  .|||.|..||   ||.
Sbjct  584  CTGGAG---TGCAGTGGC----------GCGAT------CTC-GGCTCA-CTGCAA--GCTCCGCCTC---CCG  631

Query  815  GAATGATCAGGTGGACCAAACTACGAATTAACATGCTTCCTGCTACAATAATTTGTGAGCCAATTTCAGAATGC  888
            |   |.|||.|    |||..|                ||||||                     .||||..|.|
Sbjct  632  G---GTTCACG----CCATTC----------------TCCTGC---------------------CTCAGCCTCC  661

Query  889  TTTGTTGCCAGTTTAATTATTGGATGGG----CAG------CCCACCATGTGTTCAGATGGGATA--TTATGGT  950
            |..||.||                ||||    |||      .||||||||..|       ||.||  ||.|.||
Sbjct  662  TGAGTAGC----------------TGGGACTACAGGTGCCCGCCACCATGCCT-------GGCTAATTTTTTGT  712

Query  951  ATTTTTCATGTGTCATTGCCTGGCATGGTTTATATTTGACTACATTCAACTCAGGGGTGTCCAGGGTGGCACAC  1024
            |||||                                                                     
Sbjct  713  ATTTT---------------------------------------------------------------------  717

Query 1025  TGTGTTTTTCAAAACTTGATTATGCAGTCGCCTGGTTCATCCGCGAATCCATGACAATATACATTTTTTTGTCT  1098
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1099  GCATTATGGGACCCAACTATAAGCTGGAGAACTGGTCGCTACAGATTACGCTGTGGGGGTACAGCAGAGGAAAT  1172
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1173  CCTAGATGTA  1182
                      
Sbjct  718  ----------  717