Nucleotide Global Alignment

Description

Query:
TRCN0000479702
Subject:
XR_380425.3
Aligned Length:
2122
Identities:
775
Gaps:
1262

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGTGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTTTG  518

Query    1  --------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGA  66
                    |||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.||||||||||||
Sbjct  519  GAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATGGA  592

Query   67  AAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGAT  140
            ||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.|||||
Sbjct  593  AAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGGAT  666

Query  141  CAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCT  214
            ||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.|||||||||||||||||||
Sbjct  667  CAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGCCT  740

Query  215  TTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCC  288
            ||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||.
Sbjct  741  TTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGCCT  814

Query  289  CCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAA  362
            ||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct  815  CCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATCAA  888

Query  363  GGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGG  436
            |||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||.|
Sbjct  889  GGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGCAG  962

Query  437  TGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTAC  510
            ||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||   
Sbjct  963  TGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC---  1033

Query  511  ACAATCCAGGGACAGTATGCCA----TCCCTCACCCGGATTTGACCAAGCTCCACCAGTTGGCCATGCAGCAAA  580
                 |||..||.|| .|||||    ||||| |||                          |||      ||||
Sbjct 1034  -----CCACCGAAAG-GTGCCACCATTCCCT-ACC--------------------------GCC------CAAA  1068

Query  581  CCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAA  654
            .|||...|||.|||||  |.||           .|||..|.||.|...||  ||||..|||.|||         
Sbjct 1069  GCCCGCCTCCACCCCT--GTCA-----------TTTTTGCAGGTGGTCAG--GCCTACACAATCC---------  1118

Query  655  GCTCAAAATCTGATGGGCCAGT----CATC----------AGGTCTGGACGCCAGCCCACCGGCCAGCACTCAT  714
                         .|||.||||    ||||          |.|||||||.||||||||||||||||||||||||
Sbjct 1119  -------------AGGGACAGTACGCCATCCCCCACCCAGATGTCTGGATGCCAGCCCACCGGCCAGCACTCAT  1179

Query  715  GAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACA  788
            |||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 1180  GAGCTCACCATTCCCAATGATCTTATAGGCTGCATAATTGGACGCCAAGGCACCAAAATCAATGAAATCCGACA  1253

Query  789  GATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGA  862
            ||||||||||||||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||.||||
Sbjct 1254  GATGTCTGGAGCTCAGATCAAAATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGA  1327

Query  863  CCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGG--GCA  934
            ||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||  |||
Sbjct 1328  CCCCAGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCACCGGGATGGGTGCA  1401

Query  935  CGCTG---------------------------------------------------------------------  939
            |.||.                                                                     
Sbjct 1402  CTCTAACCTACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTG  1475

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1476  TACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGC  1549

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1550  CCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTC  1623

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1624  AACGTATTCCCAAATGTGATGTTTCAGAGATTTATTCCTCAGTATCCATGTGACTGTCTGTTTAAAAGTTGGTT  1697

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1698  TGATGCTTTAACAGCACTTCCTATGTCCTGCTGTCCCTTGTTCTCAGAGACCCTCCTCTCTCACCCAGTCTACT  1771

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1772  GACTCATTTCCGCCCTAGGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAG  1845

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1846  AGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGG  1919

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1920  GATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAA  1993

Query  940  --------------------------------------------------  939
                                                              
Sbjct 1994  GTTCATCTGCACCCATCAGAGTTTAATAAATGTCGTGTTCCTCCCCCATG  2043

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