Nucleotide Global Alignment

Description

Query:
TRCN0000480205
Subject:
XM_006519062.2
Aligned Length:
3208
Identities:
1559
Gaps:
1442

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCGGGAGACGAGGAGCGAGGCTTCCTGGCGGCCCGCGAGGAGCTGGCGAGCGCCCTGAGGTGGGATTCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCAGGTTTTTCCCCTGGAGCAGCTCATGCCGCTTCTGGCCACCTCTCTGCCACCAGCCGCCCGCTACCTGCAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGACGCCGGACGCTTGGTCCGCTGCAACGCTCATGGGGAGCCTCGAAACTACCTCAACACCCTATCCACGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGAACATCCTGGAAAAATATGGTCGCAACCTCCTCAGCCCGCAGCGGCCCCGGTATTGGCGCTCAGTGAAGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAATAACCCCGTCTTTCGCAGCACGGTGGATGCTGTGCAGGGTGGCCGGGATGTACTACGGTTGTATGGCTATA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGAGGAGCGCCCAGATGGATTGAGTTTCCCCGAAGGGCAGGAGGAACCAGATGAATACCAGGTTGCTGTTGTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACACTAGAAGTACTGCTGCTTCGCACCGAGCTCAGTTTGCTGTTGCAGAATACTCATCCCAGACAGAATGCACT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGACCAGCTGCTAAGAGAGAGCGTTGAAGATGGTGTAAGGAAGATGCTGCAGCTTTCAGAGTTTCACCCCCTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGAGGGAGATTGTTCCTGGCCCCCGCCCCTCTGCCCAAGGCTCCACTCCTGGTCCCTGTTTCCTCTGTGGTTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCCCCAGGCACACTGCACTGTCCAGCCTGTAACCAAGTCTCGTGCCCAGCTTGTGACATTTTGTTCCATGGGCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCCGTCCCGTGCACATCACCTTCGCCAAGCCCTGCCTGGGTCCCACCAGACTGCCAGCCTGAGCTCTAGTTTAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTGCCTCGTCCCAACCACGGCCCCCCTCCTCCTCCTTGGCCCTGGGAGATAGCTCTCTTTCTTCCCCTGACCCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCAAATGCCTGTCTGCCCTGGCATTGTCTTACCTGTGCCACACTAAATGAGCCTTGGGCAGTGTTCTGTGCAGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTGTAGTCAGCCCAAAGGCTGCAAGGTGCCGGGAATAGAGGGTTCCCATGGAACCGGGGGCCTAGAACCTGAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTGCACGGGATCAATGGGCCTGCCAGAGCTGTACCTTTGAGAATGAGGCAGCAGCTGTGCTATGCGCCATATGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCGACCTCGGCTGGCCCAGCCTCCCAGCTTGGTGGTGGATTCCCATGATGCTGGTGTTTGCCAACAGTCCCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TAAGCAGGAGGATCCTTTGCTCACCGCTGCCCAGCCTCAGGTGTGGTACTGTGACCATTGTACCTTCTGCAATT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAGGCCCTGTCTGGGTGTGTGCCATGTGCAACCGAACCCGAGACCCCATCCCTACACAGCCTGCCCTCCAGTCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TATCCCAGCTCTTTGGAAAAGGGACGCCCAAAGCCAGGGTCCTCACAACACCTTGGTTCCTCCCTGCCTGCTTC  1406

Query    1  ----------------------------------ATGCGGGAAGAAGGCCTCCAGCTAGTGAGCATGATCCGGG  40
                                              ||||||.|.|||||.||||||||.|||||||||||||.||
Sbjct 1407  CTGTGGAGACCCAGAGAAACAACGCCAAGATAAGATGCGGAAGGAAGGTCTCCAGCTCGTGAGCATGATCCAGG  1480

Query   41  AAGGGGAAGCCGCAGGTGCCTGTCCAGAGGAGATCTTCTCGGCTCTGCAGTACTCGGGCACTGAGGTGCCTCTG  114
            ||||.|||.|.||.||||||.|||||||.|||.|||||||.|||||.||.|||||.|||||.||||||||.||.
Sbjct 1481  AAGGAGAAACTGCGGGTGCCAGTCCAGAAGAGGTCTTCTCAGCTCTCCAATACTCAGGCACAGAGGTGCCCCTC  1554

Query  115  CAGTGGTTGCGCTCAGAACTGCCCTACGTCCTGGAGATGGTGGCTGAGCTGGCTGGACAGCAGGACCCTGGGCT  188
            |||||||||||.|||||.|||.||||||||||||||||||||||||||||.||||||||.|||||.||.|.|||
Sbjct 1555  CAGTGGTTGCGTTCAGAGCTGTCCTACGTCCTGGAGATGGTGGCTGAGCTTGCTGGACAACAGGATCCAGAGCT  1628

Query  189  GGGTGCCTTTTCCTGTCAGGAGGCCCGGAGAGCCTGGCTGGATCGTCATGGCAACCTTGATGAAGCTGTGGAGG  262
            |||.|||||||||||||||||.|||||||.|||||||||.|||||.|||||||||||.|||||||||||.||||
Sbjct 1629  GGGGGCCTTTTCCTGTCAGGAAGCCCGGAAAGCCTGGCTTGATCGCCATGGCAACCTGGATGAAGCTGTAGAGG  1702

Query  263  AGTGTGTGAGGACCAGGCGAAGGAAGGTGCAGGAGCTCCAGTCTCTAGGCTTTGGGCCTGAGGAGGGGTCTCTC  336
            |||||||||||.|||||.|.|||||||||||.|||||.|||||.||.||||||||||||.||||.|||||.||.
Sbjct 1703  AGTGTGTGAGGGCCAGGAGGAGGAAGGTGCACGAGCTGCAGTCCCTGGGCTTTGGGCCTAAGGAAGGGTCACTA  1776

Query  337  CAGGCATTGTTCCAGCACGGAGGTGATGTGTCACGGGCCCTGACTGAGCTACAGCGCCAACGCCTAGAGCCCTT  410
            |||||||||||||||||.||.|||||.|||.|.|||||||||||||||.||||||||||.|||||.||||||||
Sbjct 1777  CAGGCATTGTTCCAGCATGGGGGTGACGTGGCTCGGGCCCTGACTGAGTTACAGCGCCAGCGCCTGGAGCCCTT  1850

Query  411  CCGCCAGCGCCTCTGGGACAGTGGCCCTGAGCCCACCCCTTCCTGGGATGGGCCAGACAAGCAGAGCCTGGTCA  484
            ||..||||||||.||||||||.|.||||||.|||||.||.|.|||||||||||..||||..||||||.||||||
Sbjct 1851  CCATCAGCGCCTATGGGACAGAGACCCTGAACCCACTCCCTGCTGGGATGGGCTGGACAGACAGAGCTTGGTCA  1924

Query  485  GGCGGCTTTTGGCAGTCTACGCACTCCCCAGCTGGGGCCGGGCAGAGCTGGCACTGTCACTGCTGCAGGAGACA  558
            |.||.|||.||||.||||||.|||||||||||||||||||.|||||||||||.|||.|.|||||||||||||||
Sbjct 1925  GACGCCTTCTGGCCGTCTACACACTCCCCAGCTGGGGCCGAGCAGAGCTGGCGCTGGCGCTGCTGCAGGAGACA  1998

Query  559  CCCAGGAACTATGAGTTGGGGGATGTGGTAGAAGCTGTGAGGCACAGCCAGGACCGGGCCTTCCTGCGCCGCTT  632
            ||||||||||||||||||..|||.|||||.||.|||||||||||||||||||||||||||||.|||||.||..|
Sbjct 1999  CCCAGGAACTATGAGTTGTTGGACGTGGTGGAGGCTGTGAGGCACAGCCAGGACCGGGCCTTTCTGCGTCGACT  2072

Query  633  GCTTGCCCAGGAGTGTGCCGTGTGTGGCTGGGCCCTGCCCCACAACCGGATGCAGGCCCTGACTTCCTGTGAGT  706
            ||||||||||||.|||||.|||||.||.||||||||.||||.||||||||||||||||||||..||||||||||
Sbjct 2073  GCTTGCCCAGGAATGTGCTGTGTGCGGGTGGGCCCTTCCCCGCAACCGGATGCAGGCCCTGATCTCCTGTGAGT  2146

Query  707  GCACCATCTGTCCTGACTGCTTCCGCCAGCACTTCACCATCGCCTTGAAGGAGAAGCACATCACAGACATGGTG  780
            |||||||.|||||.||.|||||||||||.|||||||||||.|||.|||||||||||||||||||||||||||||
Sbjct 2147  GCACCATATGTCCCGAATGCTTCCGCCAACACTTCACCATTGCCCTGAAGGAGAAGCACATCACAGACATGGTG  2220

Query  781  TGCCCTGCCTGTGGCCGCCCCGACCTCACCGATGACACACAGTTGCTCAGCTACTTCTCTACCCTTGACATCCA  854
            ||||||||||||||||||||.||||||||.||||||.|.|||||.||||||||||||||.||||||||||||||
Sbjct 2221  TGCCCTGCCTGTGGCCGCCCTGACCTCACTGATGACGCTCAGTTACTCAGCTACTTCTCCACCCTTGACATCCA  2294

Query  855  GCTTCGCGAGAGCCTAGAGCCAGATGCCTATGCGTTGTTCCATAAGAAGCTGACCGAGGGTGTGCTGATGCGGG  928
            |||..|.|||||||||||.||.|||||.|||||..||||.||.||||||||||||||||.||||||.|||||.|
Sbjct 2295  GCTCAGAGAGAGCCTAGACCCCGATGCATATGCCCTGTTTCACAAGAAGCTGACCGAGGCTGTGCTTATGCGAG  2368

Query  929  ACCCCAAGTTCTTGTGGTGTGCCCAGTGCTCCTTTGGCTTCATATATGAGCGTGAGCAGCTGGAGGCAACTTGT  1002
            |||||||||||||||||||.||||||||.||||||||||||||.|||||.||.||.|||||||||||.||.|||
Sbjct 2369  ACCCCAAGTTCTTGTGGTGCGCCCAGTGTTCCTTTGGCTTCATCTATGAACGCGAACAGCTGGAGGCGACGTGT  2442

Query 1003  CCCCAGTGTCACCAGACCTTCTGTGTGCGCTGCAAGCGCCAGTGGGAGGAGCAGCACCGAGGTCGGAGCTGTGA  1076
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.|||||.|||||
Sbjct 2443  CCCCAGTGTCACCAGACCTTCTGTGTGCGCTGCAAGCGCCAGTGGGAGGAGCAGCACAGAGGACGGAGTTGTGA  2516

Query 1077  GGACTTCCAGAACTGGAAACGCATGAACGACCCAGAATACCAGGCCCAGGGCCTAGCAATGTATCTTCAGGAAA  1150
            |||.|||||||||||||||||||..||.||||||||.||||||||.||.|||.|.||.|||||.||||||||||
Sbjct 2517  GGATTTCCAGAACTGGAAACGCACCAATGACCCAGAGTACCAGGCTCAAGGCTTGGCCATGTACCTTCAGGAAA  2590

Query 1151  ACGGCATTGACTGCCCCAAATGCAAGTTCTCGTACGCCCTGGCCCGAGGAGGCTGCATGCACTTTCACTGTACC  1224
            |||||||||||||.||.||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||.
Sbjct 2591  ACGGCATTGACTGTCCGAAATGCAAGTTCTCGTACGCACTGGCCCGGGGAGGCTGCATGCACTTCCACTGCACG  2664

Query 1225  CAGTGCCGCCACCAGTTCTGCAGCGGCTGCTACAATGCCTTTTACGCCAAGAATAAATGTCCAGAGCCTAACTG  1298
            |||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 2665  CAGTGTCGACACCAGTTCTGCAGTGGCTGCTACAACGCCTTTTACGCCAAGAATAAATGTCCAGACCCTAACTG  2738

Query 1299  CAGGGTGAAAAAGTCCCTGCACGGCCACCACCCTCGAGACTGCCTCTTCTACCTGCGGGACTGGACTGCTCTCC  1372
            ||.||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||..||
Sbjct 2739  CAAGGTGAAAAAGTCCCTGCATGGCCACCACCCTCGAGACTGCCTCTTCTACCTACGGGACTGGACTGCTGCCC  2812

Query 1373  GGCTTCAGAAGCTGCTACAGGACAATAACGTCATGTTTAATACAGAGCCTCCAGCTGGGGCCCGGGCAGTCCCT  1446
            |.||.|||||.|||.|.|||||||||||.||||||||||||||||||||||||||||||.|.||||||||||||
Sbjct 2813  GCCTCCAGAAACTGTTGCAGGACAATAATGTCATGTTTAATACAGAGCCTCCAGCTGGGACACGGGCAGTCCCT  2886

Query 1447  GGAGGCGGCTGCCGAGTGATAGAGCAGAAGGAGGTTCCCAATGGGCTCAGGGACGAAGCTTGTGGCAAGGAAAC  1520
            |||||.||||||.|||||||.||||||||||||||.|..|.||||.|||||||.||||||||.|||||||||||
Sbjct 2887  GGAGGGGGCTGCAGAGTGATGGAGCAGAAGGAGGTCCATAGTGGGTTCAGGGATGAAGCTTGCGGCAAGGAAAC  2960

Query 1521  TCCAGCTGGCTATGCCGGCCTGTGCCAGGCACACTACAAAGAGTATCTTGTGAGCCTCATCAATGCCCACTCGC  1594
            ||||.||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||.||.|
Sbjct 2961  TCCACCTGGCTATGCCGGCCTATGTCAGGCACACTACAAAGAGTATCTCGTGAGCCTCATCAATGCCCATTCAC  3034

Query 1595  TGGACCCAGCCACCTTGTATGAGGTGGAAGAGCTGGAGACGGCCACTGAGCGCTACCTGCACGTACGC-CCCCA  1667
            ||||||||||.|||||||||||.|||||.|||||||||||.||||||...||||||||.||..|| || ||.||
Sbjct 3035  TGGACCCAGCTACCTTGTATGAAGTGGAGGAGCTGGAGACAGCCACTATTCGCTACCTACATTTA-GCTCCTCA  3107

Query 1668  GCCTTTGGCTGGAGAGGATCCCCCTGCTTACCAGGCCCGCTTGTTACAGAAGCTGACAGAAGAGGTACCCTTGG  1741
            |||...||.|||||||||||..|||||||||||||||||..|.|||||||||||||.|||||||||||||||||
Sbjct 3108  GCCCGCGGATGGAGAGGATCTGCCTGCTTACCAGGCCCGGCTATTACAGAAGCTGAGAGAAGAGGTACCCTTGG  3181

Query 1742  GACAGAGTATCCCCCGCAGGCGGAAG  1767
            ||||||||||..|||||||..|.|||
Sbjct 3182  GACAGAGTATTGCCCGCAGAAGAAAG  3207