Nucleotide Global Alignment
Description
- Query:
- TRCN0000480205
- Subject:
- XM_006519062.2
- Aligned Length:
- 3208
- Identities:
- 1559
- Gaps:
- 1442
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGGGAGACGAGGAGCGAGGCTTCCTGGCGGCCCGCGAGGAGCTGGCGAGCGCCCTGAGGTGGGATTCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGGTTTTTCCCCTGGAGCAGCTCATGCCGCTTCTGGCCACCTCTCTGCCACCAGCCGCCCGCTACCTGCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGACGCCGGACGCTTGGTCCGCTGCAACGCTCATGGGGAGCCTCGAAACTACCTCAACACCCTATCCACGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGAACATCCTGGAAAAATATGGTCGCAACCTCCTCAGCCCGCAGCGGCCCCGGTATTGGCGCTCAGTGAAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATAACCCCGTCTTTCGCAGCACGGTGGATGCTGTGCAGGGTGGCCGGGATGTACTACGGTTGTATGGCTATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGAGGAGCGCCCAGATGGATTGAGTTTCCCCGAAGGGCAGGAGGAACCAGATGAATACCAGGTTGCTGTTGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACACTAGAAGTACTGCTGCTTCGCACCGAGCTCAGTTTGCTGTTGCAGAATACTCATCCCAGACAGAATGCACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGACCAGCTGCTAAGAGAGAGCGTTGAAGATGGTGTAAGGAAGATGCTGCAGCTTTCAGAGTTTCACCCCCTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAGGGAGATTGTTCCTGGCCCCCGCCCCTCTGCCCAAGGCTCCACTCCTGGTCCCTGTTTCCTCTGTGGTTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCCAGGCACACTGCACTGTCCAGCCTGTAACCAAGTCTCGTGCCCAGCTTGTGACATTTTGTTCCATGGGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCGTCCCGTGCACATCACCTTCGCCAAGCCCTGCCTGGGTCCCACCAGACTGCCAGCCTGAGCTCTAGTTTAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCCTCGTCCCAACCACGGCCCCCCTCCTCCTCCTTGGCCCTGGGAGATAGCTCTCTTTCTTCCCCTGACCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAAATGCCTGTCTGCCCTGGCATTGTCTTACCTGTGCCACACTAAATGAGCCTTGGGCAGTGTTCTGTGCAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGTAGTCAGCCCAAAGGCTGCAAGGTGCCGGGAATAGAGGGTTCCCATGGAACCGGGGGCCTAGAACCTGAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCACGGGATCAATGGGCCTGCCAGAGCTGTACCTTTGAGAATGAGGCAGCAGCTGTGCTATGCGCCATATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCGACCTCGGCTGGCCCAGCCTCCCAGCTTGGTGGTGGATTCCCATGATGCTGGTGTTTGCCAACAGTCCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAAGCAGGAGGATCCTTTGCTCACCGCTGCCCAGCCTCAGGTGTGGTACTGTGACCATTGTACCTTCTGCAATT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGGCCCTGTCTGGGTGTGTGCCATGTGCAACCGAACCCGAGACCCCATCCCTACACAGCCTGCCCTCCAGTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATCCCAGCTCTTTGGAAAAGGGACGCCCAAAGCCAGGGTCCTCACAACACCTTGGTTCCTCCCTGCCTGCTTC 1406
Query 1 ----------------------------------ATGCGGGAAGAAGGCCTCCAGCTAGTGAGCATGATCCGGG 40
||||||.|.|||||.||||||||.|||||||||||||.||
Sbjct 1407 CTGTGGAGACCCAGAGAAACAACGCCAAGATAAGATGCGGAAGGAAGGTCTCCAGCTCGTGAGCATGATCCAGG 1480
Query 41 AAGGGGAAGCCGCAGGTGCCTGTCCAGAGGAGATCTTCTCGGCTCTGCAGTACTCGGGCACTGAGGTGCCTCTG 114
||||.|||.|.||.||||||.|||||||.|||.|||||||.|||||.||.|||||.|||||.||||||||.||.
Sbjct 1481 AAGGAGAAACTGCGGGTGCCAGTCCAGAAGAGGTCTTCTCAGCTCTCCAATACTCAGGCACAGAGGTGCCCCTC 1554
Query 115 CAGTGGTTGCGCTCAGAACTGCCCTACGTCCTGGAGATGGTGGCTGAGCTGGCTGGACAGCAGGACCCTGGGCT 188
|||||||||||.|||||.|||.||||||||||||||||||||||||||||.||||||||.|||||.||.|.|||
Sbjct 1555 CAGTGGTTGCGTTCAGAGCTGTCCTACGTCCTGGAGATGGTGGCTGAGCTTGCTGGACAACAGGATCCAGAGCT 1628
Query 189 GGGTGCCTTTTCCTGTCAGGAGGCCCGGAGAGCCTGGCTGGATCGTCATGGCAACCTTGATGAAGCTGTGGAGG 262
|||.|||||||||||||||||.|||||||.|||||||||.|||||.|||||||||||.|||||||||||.||||
Sbjct 1629 GGGGGCCTTTTCCTGTCAGGAAGCCCGGAAAGCCTGGCTTGATCGCCATGGCAACCTGGATGAAGCTGTAGAGG 1702
Query 263 AGTGTGTGAGGACCAGGCGAAGGAAGGTGCAGGAGCTCCAGTCTCTAGGCTTTGGGCCTGAGGAGGGGTCTCTC 336
|||||||||||.|||||.|.|||||||||||.|||||.|||||.||.||||||||||||.||||.|||||.||.
Sbjct 1703 AGTGTGTGAGGGCCAGGAGGAGGAAGGTGCACGAGCTGCAGTCCCTGGGCTTTGGGCCTAAGGAAGGGTCACTA 1776
Query 337 CAGGCATTGTTCCAGCACGGAGGTGATGTGTCACGGGCCCTGACTGAGCTACAGCGCCAACGCCTAGAGCCCTT 410
|||||||||||||||||.||.|||||.|||.|.|||||||||||||||.||||||||||.|||||.||||||||
Sbjct 1777 CAGGCATTGTTCCAGCATGGGGGTGACGTGGCTCGGGCCCTGACTGAGTTACAGCGCCAGCGCCTGGAGCCCTT 1850
Query 411 CCGCCAGCGCCTCTGGGACAGTGGCCCTGAGCCCACCCCTTCCTGGGATGGGCCAGACAAGCAGAGCCTGGTCA 484
||..||||||||.||||||||.|.||||||.|||||.||.|.|||||||||||..||||..||||||.||||||
Sbjct 1851 CCATCAGCGCCTATGGGACAGAGACCCTGAACCCACTCCCTGCTGGGATGGGCTGGACAGACAGAGCTTGGTCA 1924
Query 485 GGCGGCTTTTGGCAGTCTACGCACTCCCCAGCTGGGGCCGGGCAGAGCTGGCACTGTCACTGCTGCAGGAGACA 558
|.||.|||.||||.||||||.|||||||||||||||||||.|||||||||||.|||.|.|||||||||||||||
Sbjct 1925 GACGCCTTCTGGCCGTCTACACACTCCCCAGCTGGGGCCGAGCAGAGCTGGCGCTGGCGCTGCTGCAGGAGACA 1998
Query 559 CCCAGGAACTATGAGTTGGGGGATGTGGTAGAAGCTGTGAGGCACAGCCAGGACCGGGCCTTCCTGCGCCGCTT 632
||||||||||||||||||..|||.|||||.||.|||||||||||||||||||||||||||||.|||||.||..|
Sbjct 1999 CCCAGGAACTATGAGTTGTTGGACGTGGTGGAGGCTGTGAGGCACAGCCAGGACCGGGCCTTTCTGCGTCGACT 2072
Query 633 GCTTGCCCAGGAGTGTGCCGTGTGTGGCTGGGCCCTGCCCCACAACCGGATGCAGGCCCTGACTTCCTGTGAGT 706
||||||||||||.|||||.|||||.||.||||||||.||||.||||||||||||||||||||..||||||||||
Sbjct 2073 GCTTGCCCAGGAATGTGCTGTGTGCGGGTGGGCCCTTCCCCGCAACCGGATGCAGGCCCTGATCTCCTGTGAGT 2146
Query 707 GCACCATCTGTCCTGACTGCTTCCGCCAGCACTTCACCATCGCCTTGAAGGAGAAGCACATCACAGACATGGTG 780
|||||||.|||||.||.|||||||||||.|||||||||||.|||.|||||||||||||||||||||||||||||
Sbjct 2147 GCACCATATGTCCCGAATGCTTCCGCCAACACTTCACCATTGCCCTGAAGGAGAAGCACATCACAGACATGGTG 2220
Query 781 TGCCCTGCCTGTGGCCGCCCCGACCTCACCGATGACACACAGTTGCTCAGCTACTTCTCTACCCTTGACATCCA 854
||||||||||||||||||||.||||||||.||||||.|.|||||.||||||||||||||.||||||||||||||
Sbjct 2221 TGCCCTGCCTGTGGCCGCCCTGACCTCACTGATGACGCTCAGTTACTCAGCTACTTCTCCACCCTTGACATCCA 2294
Query 855 GCTTCGCGAGAGCCTAGAGCCAGATGCCTATGCGTTGTTCCATAAGAAGCTGACCGAGGGTGTGCTGATGCGGG 928
|||..|.|||||||||||.||.|||||.|||||..||||.||.||||||||||||||||.||||||.|||||.|
Sbjct 2295 GCTCAGAGAGAGCCTAGACCCCGATGCATATGCCCTGTTTCACAAGAAGCTGACCGAGGCTGTGCTTATGCGAG 2368
Query 929 ACCCCAAGTTCTTGTGGTGTGCCCAGTGCTCCTTTGGCTTCATATATGAGCGTGAGCAGCTGGAGGCAACTTGT 1002
|||||||||||||||||||.||||||||.||||||||||||||.|||||.||.||.|||||||||||.||.|||
Sbjct 2369 ACCCCAAGTTCTTGTGGTGCGCCCAGTGTTCCTTTGGCTTCATCTATGAACGCGAACAGCTGGAGGCGACGTGT 2442
Query 1003 CCCCAGTGTCACCAGACCTTCTGTGTGCGCTGCAAGCGCCAGTGGGAGGAGCAGCACCGAGGTCGGAGCTGTGA 1076
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.|||||.|||||
Sbjct 2443 CCCCAGTGTCACCAGACCTTCTGTGTGCGCTGCAAGCGCCAGTGGGAGGAGCAGCACAGAGGACGGAGTTGTGA 2516
Query 1077 GGACTTCCAGAACTGGAAACGCATGAACGACCCAGAATACCAGGCCCAGGGCCTAGCAATGTATCTTCAGGAAA 1150
|||.|||||||||||||||||||..||.||||||||.||||||||.||.|||.|.||.|||||.||||||||||
Sbjct 2517 GGATTTCCAGAACTGGAAACGCACCAATGACCCAGAGTACCAGGCTCAAGGCTTGGCCATGTACCTTCAGGAAA 2590
Query 1151 ACGGCATTGACTGCCCCAAATGCAAGTTCTCGTACGCCCTGGCCCGAGGAGGCTGCATGCACTTTCACTGTACC 1224
|||||||||||||.||.||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||.
Sbjct 2591 ACGGCATTGACTGTCCGAAATGCAAGTTCTCGTACGCACTGGCCCGGGGAGGCTGCATGCACTTCCACTGCACG 2664
Query 1225 CAGTGCCGCCACCAGTTCTGCAGCGGCTGCTACAATGCCTTTTACGCCAAGAATAAATGTCCAGAGCCTAACTG 1298
|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 2665 CAGTGTCGACACCAGTTCTGCAGTGGCTGCTACAACGCCTTTTACGCCAAGAATAAATGTCCAGACCCTAACTG 2738
Query 1299 CAGGGTGAAAAAGTCCCTGCACGGCCACCACCCTCGAGACTGCCTCTTCTACCTGCGGGACTGGACTGCTCTCC 1372
||.||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||..||
Sbjct 2739 CAAGGTGAAAAAGTCCCTGCATGGCCACCACCCTCGAGACTGCCTCTTCTACCTACGGGACTGGACTGCTGCCC 2812
Query 1373 GGCTTCAGAAGCTGCTACAGGACAATAACGTCATGTTTAATACAGAGCCTCCAGCTGGGGCCCGGGCAGTCCCT 1446
|.||.|||||.|||.|.|||||||||||.||||||||||||||||||||||||||||||.|.||||||||||||
Sbjct 2813 GCCTCCAGAAACTGTTGCAGGACAATAATGTCATGTTTAATACAGAGCCTCCAGCTGGGACACGGGCAGTCCCT 2886
Query 1447 GGAGGCGGCTGCCGAGTGATAGAGCAGAAGGAGGTTCCCAATGGGCTCAGGGACGAAGCTTGTGGCAAGGAAAC 1520
|||||.||||||.|||||||.||||||||||||||.|..|.||||.|||||||.||||||||.|||||||||||
Sbjct 2887 GGAGGGGGCTGCAGAGTGATGGAGCAGAAGGAGGTCCATAGTGGGTTCAGGGATGAAGCTTGCGGCAAGGAAAC 2960
Query 1521 TCCAGCTGGCTATGCCGGCCTGTGCCAGGCACACTACAAAGAGTATCTTGTGAGCCTCATCAATGCCCACTCGC 1594
||||.||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||.||.|
Sbjct 2961 TCCACCTGGCTATGCCGGCCTATGTCAGGCACACTACAAAGAGTATCTCGTGAGCCTCATCAATGCCCATTCAC 3034
Query 1595 TGGACCCAGCCACCTTGTATGAGGTGGAAGAGCTGGAGACGGCCACTGAGCGCTACCTGCACGTACGC-CCCCA 1667
||||||||||.|||||||||||.|||||.|||||||||||.||||||...||||||||.||..|| || ||.||
Sbjct 3035 TGGACCCAGCTACCTTGTATGAAGTGGAGGAGCTGGAGACAGCCACTATTCGCTACCTACATTTA-GCTCCTCA 3107
Query 1668 GCCTTTGGCTGGAGAGGATCCCCCTGCTTACCAGGCCCGCTTGTTACAGAAGCTGACAGAAGAGGTACCCTTGG 1741
|||...||.|||||||||||..|||||||||||||||||..|.|||||||||||||.|||||||||||||||||
Sbjct 3108 GCCCGCGGATGGAGAGGATCTGCCTGCTTACCAGGCCCGGCTATTACAGAAGCTGAGAGAAGAGGTACCCTTGG 3181
Query 1742 GACAGAGTATCCCCCGCAGGCGGAAG 1767
||||||||||..|||||||..|.|||
Sbjct 3182 GACAGAGTATTGCCCGCAGAAGAAAG 3207