Nucleotide Global Alignment
Description
- Query:
- TRCN0000480205
- Subject:
- XR_383184.1
- Aligned Length:
- 3468
- Identities:
- 1475
- Gaps:
- 1799
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGTGGCCCACAGTCCCGCCCTCTCTGCCAGGACTTCCTGTTCCCGGTAACCCTGGCCGTGGATGGGGCTGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCGGTGGCTTAAGTGACCCGGGCTGCTGTGGCGCCGCGCGCACCTGCGCCAGCCCCTGGAGGGCAGAGAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGAGCCTGTCTCCAGTCTCAGGATGCCGGGAGACGAGGAGCGAGGCTTCCTGGCGGCCCGCGAGGAGCTGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCGCCCTGAGGTGGGATTCTGCGCAGGTTTTTCCCCTGGAGCAGCTCATGCCGCTTCTGGCCACCTCTCTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCAGCCGCCCGCTACCTGCAGCTGGACGCCGGACGCTTGGTCCGCTGCAACGCTCATGGGGAGCCTCGAAACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACCTCAACACCCTATCCACGGCCCTGAACATCCTGGAAAAATATGGTCGCAACCTCCTCAGCCCGCAGCGGCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGTATTGGCGCTCAGTGAAGTTTAATAACCCCGTCTTTCGCAGCACGGTGGATGCTGTGCAGGGTGGCCGGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTACTACGGTTGTATGGCTATACTGAGGAGCGCCCAGATGGATTGAGTTTCCCCGAAGGGCAGGAGGAACCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGAATACCAGGTTGCTGTTGTCACACTAGAAGTACTGCTGCTTCGCACCGAGCTCAGTTTGCTGTTGCAGAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTCATCCCAGACAGAATGCACTGGACCAGCTGCTAAGAGAGAGCGTTGAAGATGGTGTAAGGAAGATGCTGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTTTCAGAGTTTCACCCCCTTCTGAGGGAGATTGTTCCTGGCCCCCGCCCCTCTGCCCAAGGCTCCACTCCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCCCTGTTTCCTCTGTGGTTCTGCCCCAGGCACACTGCACTGTCCAGCCTGTAACCAAGTCTCGTGCCCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTGACATTTTGTTCCATGGGCATCCGTCCCGTGCACATCACCTTCGCCAAGCCCTGCCTGGGTCCCACCAGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCAGCCTGAGCTCTAGTTTACCTGCCTCGTCCCAACCACGGCCCCCCTCCTCCTCCTTGGCCCTGGGAGATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTCTCTTTCTTCCCCTGACCCTGCAAATGCCTGTCTGCCCTGGCATTGTCTTACCTGTGCCACACTAAATGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTGGGCAGTGTTCTGTGCAGTCTGTAGTCAGCCCAAAGGCTGCAAGGTGCCGGGAATAGAGGGTTCCCATGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCGGGGGCCTAGAACCTGAGCCTGCACGGGATCAATGGGCCTGCCAGAGCTGTACCTTTGAGAATGAGGCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCTGTGCTATGCGCCATATGTGAGCGACCTCGGCTGGCCCAGCCTCCCAGCTTGGTGGTGGATTCCCATGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTGGTGTTTGCCAACAGTCCCTTAAGCAGGAGGATCCTTTGCTCACCGCTGCCCAGCCTCAGGTGTGGTACTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGACCATTGTACCTTCTGCAATTCAGGCCCTGTCTGGGTGTGTGCCATGTGCAACCGAACCCGAGACCCCATCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTACACAGCCTGCCCTCCAGTCCTATCCCAGCTCTTTGGAAAAGGGACGCCCAAAGCCAGGGTCCTCACAACAC 1554
Query 1 ---------------------------------------------------------ATGCGGGAAGAAGGCCT 17
||||||.|.|||||.||
Sbjct 1555 CTTGGTTCCTCCCTGCCTGCTTCCTGTGGAGACCCAGAGAAACAACGCCAAGATAAGATGCGGAAGGAAGGTCT 1628
Query 18 CCAGCTAGTGAGCATGATCCGGGAAGGGGAAGCCGCAGGTGCCTGTCCAGAGGAGATCTTCTCGGCTCTGCAGT 91
||||||.|||||||||||||.||||||.|||.|.||.||||||.|||||||.|||.|||||||.|||||.||.|
Sbjct 1629 CCAGCTCGTGAGCATGATCCAGGAAGGAGAAACTGCGGGTGCCAGTCCAGAAGAGGTCTTCTCAGCTCTCCAAT 1702
Query 92 ACTCGGGCACTGAGGTGCCTCTGCAGTGGTTGCGCTCAGAACTGCCCTACGTCCTGGAGATGGTGGCTGAGCTG 165
||||.|||||.||||||||.||.|||||||||||.|||||.|||.||||||||||||||||||||||||||||.
Sbjct 1703 ACTCAGGCACAGAGGTGCCCCTCCAGTGGTTGCGTTCAGAGCTGTCCTACGTCCTGGAGATGGTGGCTGAGCTT 1776
Query 166 GCTGGACAGCAGGACCCTGGGCTGGGTGCCTTTTCCTGTCAGGAGGCCCGGAGAGCCTGGCTGGATCGTCATGG 239
||||||||.|||||.||.|.||||||.|||||||||||||||||.|||||||.|||||||||.|||||.|||||
Sbjct 1777 GCTGGACAACAGGATCCAGAGCTGGGGGCCTTTTCCTGTCAGGAAGCCCGGAAAGCCTGGCTTGATCGCCATGG 1850
Query 240 CAACCTTGATGAAGCTGTGGAGGAGTGTGTGAGGACCAGGCGAAGGAAGGTGCAGGAGCTCCAGTCTCTAGGCT 313
||||||.|||||||||||.|||||||||||||||.|||||.|.|||||||||||.|||||.|||||.||.||||
Sbjct 1851 CAACCTGGATGAAGCTGTAGAGGAGTGTGTGAGGGCCAGGAGGAGGAAGGTGCACGAGCTGCAGTCCCTGGGCT 1924
Query 314 TTGGGCCTGAGGAGGGGTCTCTCCAGGCATTGTTCCAGCACGGAGGTGATGTGTCACGGGCCCTGACTGAGCTA 387
||||||||.||||.|||||.||.|||||||||||||||||.||.|||||.|||.|.|||||||||||||||.||
Sbjct 1925 TTGGGCCTAAGGAAGGGTCACTACAGGCATTGTTCCAGCATGGGGGTGACGTGGCTCGGGCCCTGACTGAGTTA 1998
Query 388 CAGCGCCAACGCCTAGAGCCCTTCCGCCAGCGCCTCTGGGACAGTGGCCCTGAGCCCACCCCTTCCTGGGATGG 461
||||||||.|||||.||||||||||..||||||||.||||||||.|.||||||.|||||.||.|.|||||||||
Sbjct 1999 CAGCGCCAGCGCCTGGAGCCCTTCCATCAGCGCCTATGGGACAGAGACCCTGAACCCACTCCCTGCTGGGATGG 2072
Query 462 GCCAGACAAGCAGAGCCTGGTCAGGCGGCTTTTGGCAGTCTACGCACTCCCCAGCTGGGGCCGGGCAGAGCTGG 535
||..||||..||||||.|||||||.||.|||.||||.||||||.|||||||||||||||||||.||||||||||
Sbjct 2073 GCTGGACAGACAGAGCTTGGTCAGACGCCTTCTGGCCGTCTACACACTCCCCAGCTGGGGCCGAGCAGAGCTGG 2146
Query 536 CACTGTCACTGCTGCAGGAGACACCCAGGAACTATGAGTTGGGGGATGTGGTAGAAGCTGTGAGGCACAGCCAG 609
|.|||.|.|||||||||||||||||||||||||||||||||..|||.|||||.||.||||||||||||||||||
Sbjct 2147 CGCTGGCGCTGCTGCAGGAGACACCCAGGAACTATGAGTTGTTGGACGTGGTGGAGGCTGTGAGGCACAGCCAG 2220
Query 610 GACCGGGCCTTCCTGCGCCGCTTGCTTGCCCAGGAGTGTGCCGTGTGTGGCTGGGCCCTGCCCCACAACCGGAT 683
|||||||||||.|||||.||..|||||||||||||.|||||.|||||.||.||||||||.||||.|||||||||
Sbjct 2221 GACCGGGCCTTTCTGCGTCGACTGCTTGCCCAGGAATGTGCTGTGTGCGGGTGGGCCCTTCCCCGCAACCGGAT 2294
Query 684 GCAGGCCCTGACTTCCTGTGAGTGCACCATCTGTCCTGACTGCTTCCGCCAGCACTTCACCATCGCCTTGAAGG 757
|||||||||||..|||||||||||||||||.|||||.||.|||||||||||.|||||||||||.|||.||||||
Sbjct 2295 GCAGGCCCTGATCTCCTGTGAGTGCACCATATGTCCCGAATGCTTCCGCCAACACTTCACCATTGCCCTGAAGG 2368
Query 758 AGAAGCACATCACAGACATGGTGTGCCCTGCCTGTGGCCGCCCCGACCTCACCGATGACACACAGTTGCTCAGC 831
|||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||.|.|||||.||||||
Sbjct 2369 AGAAGCACATCACAGACATGGTGTGCCCTGCCTGTGGCCGCCCTGACCTCACTGATGACGCTCAGTTACTCAGC 2442
Query 832 TACTTCTCTACCCTTGACATCCAGCTTCGCGAGAGCCTAGAGCCAGATGCCTATGCGTTGTTCCATAAGAAGCT 905
||||||||.|||||||||||||||||..|.|||||||||||.||.|||||.|||||..||||.||.||||||||
Sbjct 2443 TACTTCTCCACCCTTGACATCCAGCTCAGAGAGAGCCTAGACCCCGATGCATATGCCCTGTTTCACAAGAAGCT 2516
Query 906 GACCGAGGGTGTGCTGATGCGGGACCCCAAGTTCTTGTGGTGTGCCCAGTGCTCCTTTGGCTTCATATATGAGC 979
||||||||.||||||.|||||.||||||||||||||||||||.||||||||.||||||||||||||.|||||.|
Sbjct 2517 GACCGAGGCTGTGCTTATGCGAGACCCCAAGTTCTTGTGGTGCGCCCAGTGTTCCTTTGGCTTCATCTATGAAC 2590
Query 980 GTGAGCAGCTGGAGGCAACTTGTCCCCAGTGTCACCAGACCTTCTGTGTGCGCTGCAAGCGCCAGTGGGAGGAG 1053
|.||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GCGAACAGCTGGAGGCGACGTGTCCCCAGTGTCACCAGACCTTCTGTGTGCGCTGCAAGCGCCAGTGGGAGGAG 2664
Query 1054 CAGCACCGAGGTCGGAGCTGTGAGGACTTCCAGAACTGGAAACGCATGAACGACCCAGAATACCAGGCCCAGGG 1127
||||||.||||.|||||.||||||||.|||||||||||||||||||..||.||||||||.||||||||.||.||
Sbjct 2665 CAGCACAGAGGACGGAGTTGTGAGGATTTCCAGAACTGGAAACGCACCAATGACCCAGAGTACCAGGCTCAAGG 2738
Query 1128 CCTAGCAATGTATCTTCAGGAAAACGGCATTGACTGCCCCAAATGCAAGTTCTCGTACGCCCTGGCCCGAGGAG 1201
|.|.||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||||.||||||||.||||
Sbjct 2739 CTTGGCCATGTACCTTCAGGAAAACGGCATTGACTGTCCGAAATGCAAGTTCTCGTACGCACTGGCCCGGGGAG 2812
Query 1202 GCTGCATGCACTTTCACTGTACCCAGTGCCGCCACCAGTTCTGCAGCGGCTGCTACAATGCCTTTTACGCCAAG 1275
|||||||||||||.|||||.||.|||||.||.||||||||||||||.|||||||||||.|||||||||||||||
Sbjct 2813 GCTGCATGCACTTCCACTGCACGCAGTGTCGACACCAGTTCTGCAGTGGCTGCTACAACGCCTTTTACGCCAAG 2886
Query 1276 AATAAATGTCCAGAGCCTAACTGCAGGGTGAAAAAGTCCCTGCACGGCCACCACCCTCGAGACTGCCTCTTCTA 1349
||||||||||||||.||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 2887 AATAAATGTCCAGACCCTAACTGCAAGGTGAAAAAGTCCCTGCATGGCCACCACCCTCGAGACTGCCTCTTCTA 2960
Query 1350 CCTGCGGGACTGGACTGCTCTCCGGCTTCAGAAGCTGCTACAGGACAATAACGTCATGTTTAATACAGAGCCTC 1423
|||.|||||||||||||||..|||.||.|||||.|||.|.|||||||||||.||||||||||||||||||||||
Sbjct 2961 CCTACGGGACTGGACTGCTGCCCGCCTCCAGAAACTGTTGCAGGACAATAATGTCATGTTTAATACAGAGCCTC 3034
Query 1424 CAGCTGGGGCCCGGGCAGTCCCTGGAGGCGGCTGCCGAGTGATAGAGCAGAAGGAGGTTCCCAATGGGCTCAGG 1497
||||||||.|.||||||||||||||||
Sbjct 3035 CAGCTGGGACACGGGCAGTCCCTGGAG----------------------------------------------- 3061
Query 1498 GACGAAGCTTGTGGCAAGGAAACTCCAGCTGGCTATGCCGGCCTGTGCCAGGCACACTACAAAGAGTATCTTGT 1571
|||||||||||||||||||||.||
Sbjct 3062 --------------------------------------------------GGCACACTACAAAGAGTATCTCGT 3085
Query 1572 GAGCCTCATCAATGCCCACTCGCTGGACCCAGCCACCTTGTATGAGGTGGAAGAGCTGGAGACGGCCACTGAGC 1645
||||||||||||||||||.||.|||||||||||.|||||||||||.|||||.|||||||||||.||||||...|
Sbjct 3086 GAGCCTCATCAATGCCCATTCACTGGACCCAGCTACCTTGTATGAAGTGGAGGAGCTGGAGACAGCCACTATTC 3159
Query 1646 GCTACCTGCACGTACGC-CCCCAGCCTTTGGCTGGAGAGGATCCCCCTGCTTACCAGGCCCGCTTGTTACAGAA 1718
|||||||.||..|| || ||.|||||...||.|||||||||||..|||||||||||||||||..|.||||||||
Sbjct 3160 GCTACCTACATTTA-GCTCCTCAGCCCGCGGATGGAGAGGATCTGCCTGCTTACCAGGCCCGGCTATTACAGAA 3232
Query 1719 GCTGACAGAAGAGGTACCCTTGGGACAGAGTATCCCCCGCAGGCGGAAG------------------------- 1767
|||||.|||||||||||||||||||||||||||..|||||||..|.|||
Sbjct 3233 GCTGAGAGAAGAGGTACCCTTGGGACAGAGTATTGCCCGCAGAAGAAAGTAGTAGCAGAGAGCCGGGTCCTGAT 3306
Query 1768 ---------------------------------------------------------------- 1767
Sbjct 3307 GGGACTTCCTGACCCAGGCCTCAGCAGCAGTTCCAGCACCAATAAAGAGGCATCTTATGGCCTA 3370
