Nucleotide Global Alignment
Description
- Query:
- TRCN0000480317
- Subject:
- XM_017315094.1
- Aligned Length:
- 3767
- Identities:
- 2029
- Gaps:
- 1462
Alignment
Query 1 ATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCA 74
|||||||||||||||||||||||.|||||||.|||||||||.|||.||||||||||||||||||||||||||||
Sbjct 1 ATGCAGCTTAAAATAATGCCGAAGAAGAAGCACTTATCTGCAGGCGGAGTGCCCCTGATTCTCTTCCTGTGCCA 74
Query 75 GATGATTAGTGCACTGGAAGTACCTCTTGATC------------------TGGTACAGCCTCCAACCATCACCC 130
||||||.||.||.|||||.||.|||||.|||| |||||||.||||||||||||||.|
Sbjct 75 GATGATCAGCGCGCTGGATGTTCCTCTCGATCCAAAGCTCCTTCATGACTTGGTACAACCTCCAACCATCACTC 148
Query 131 AACAGTCTCCAAAAGATTACATTATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGGGAAACCG 204
|||||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.
Sbjct 149 AACAGTCACCAAAAGACTACATCATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAGGCCAAAGGGAAACCT 222
Query 205 CCCCCAAGCTTTTCCTGGACCCGTAATGGGACTCATTTTGACATCGATAAAGACCCTCTGGTCACCATGAAGCC 278
||||||||||||||||||||.||||||||.|||||.||||||||.||.||.|||||||||||||||||||||||
Sbjct 223 CCCCCAAGCTTTTCCTGGACTCGTAATGGAACTCACTTTGACATAGACAAGGACCCTCTGGTCACCATGAAGCC 296
Query 279 TGGCACAGGAACGCTCATAATTAACATCATGAGCGAAGGGAAAGCTGAGACCTATGAAGGAGTCTATCAGTGTA 352
||||.|||||||.||..|.||.|||||||||||.||.|||||.||.||||||||||||||||||||.|||||.|
Sbjct 297 TGGCTCAGGAACCCTTGTCATCAACATCATGAGTGAGGGGAAGGCAGAGACCTATGAAGGAGTCTACCAGTGCA 370
Query 353 CAGCAAGGAACGAACGCGGAGCTGCAGTTTCTAATAACATTGTTGTCCGCCCATCCAGATCACCATTGTGGACC 426
|.|||||||||||.||.||||||||.||.||.|||||||||||||||||||||||.||.|||||.|||||||||
Sbjct 371 CTGCAAGGAACGAGCGTGGAGCTGCCGTCTCCAATAACATTGTTGTCCGCCCATCTAGGTCACCCTTGTGGACC 444
Query 427 AAAGAAAAACTTGAACCAATCACACTTCAAAGTGGTCAGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGATT 500
||.||||.|||||||||.||...|||.||.|.|||.|||||.|||||||||||.||.||.||.||.||||||||
Sbjct 445 AAGGAAAGACTTGAACCTATAGTACTCCAGAATGGGCAGTCATTAGTACTTCCATGTAGGCCTCCGATTGGATT 518
Query 501 ACCACCACCTATAATATTTTGGATGGATAATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCTCAAGGTT 574
|||.||..|.|||||||||||||||||||||||||||||.|||||||||||.||||||.|.|||||.|||||..
Sbjct 519 ACCTCCGGCCATAATATTTTGGATGGATAATTCCTTTCAGAGACTTCCACAGAGTGAGCGGGTTTCCCAAGGCC 592
Query 575 TGAATGGGGACCTTTATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAAGACTATATCTGTTATGCTAGATTT 648
|.|||||.||||||||.||.||||||||||||||||||||||||||.||.|||||||||||.|||||.||||||
Sbjct 593 TAAATGGAGACCTTTACTTCTCCAATGTCCTCCCAGAGGACACCCGTGAGGACTATATCTGCTATGCCAGATTT 666
Query 649 AATCATACTCAAACCATACAGCAGAAGCAACCTATTTCTGTGAAGGTGATTTCAGTGGATGAATTGAATGACAC 722
|||||.|||||||||||.|||||||||||.|||||||||.||||||||||||||||||||||||||||||||||
Sbjct 667 AATCACACTCAAACCATCCAGCAGAAGCAGCCTATTTCTTTGAAGGTGATTTCAGTGGATGAATTGAATGACAC 740
Query 723 TATAGCTGCTAATTTGAGTGACACTGAGTTTTATGGTGCTAAATCAAGTAGAGAGAGGCCACCAACATTTTTAA 796
|||||||||||||||||||||||||||||||||||||||||||||.||||.|||||||||.|||||.|||.|||
Sbjct 741 TATAGCTGCTAATTTGAGTGACACTGAGTTTTATGGTGCTAAATCTAGTAAAGAGAGGCCCCCAACGTTTCTAA 814
Query 797 CTCCAGAAGGCAATGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGAAGGA 870
|||||||.|||||||.|||..||||||||||||||||||||||.||||||||.||||||||||||||.|||||.
Sbjct 815 CTCCAGAGGGCAATGAAAGCCACAAAGAGGAATTAAGAGGAAACGTGCTTTCGCTGGAGTGCATTGCGGAAGGC 888
Query 871 CTGCCTACCCCAATTATTTACTGG-GCAAAGGAAGATGGAATGCTACCCAAAAACAGGACAGTTTATAAGAACT 943
||.|||||.||||||||||||||| .|||| |||||.||||||||.|||...|||.|||||.|||||..|||||
Sbjct 889 CTACCTACTCCAATTATTTACTGGATCAAA-GAAGACGGAATGCTTCCCGCCAACCGGACATTTTATCGGAACT 961
Query 944 TTGAGAAAACCTTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGAAATTACCAATGTATAGCAAAAAACGCA 1017
||.||||||||.|||||||||.|||||||||.|||||.||||||||||||||.||.||.|||||||||||||||
Sbjct 962 TTAAGAAAACCCTGCAGATCACTCATGTTTCCGAAGCCGACTCTGGAAATTATCAGTGCATAGCAAAAAACGCA 1035
Query 1018 TTAGGAGCCATCCACCATACCATTTCTGTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCCCCTCAAAATCT 1091
|||||||||.||||.||.|||||||||||.|..||||||||||||||.|||||||||...||.||||||||.||
Sbjct 1036 TTAGGAGCCGTCCATCACACCATTTCTGTCACTGTTAAAGCGGCTCCCTACTGGATCGTGGCACCTCAAAACCT 1109
Query 1092 TGTGCTGTCCCCAGGAGAGGATGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTGGT 1165
.|||||.|||||.||||||.||||||||.|.|||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1110 CGTGCTTTCCCCGGGAGAGAATGGGACCCTCATCTGCAGAGCTAATGGCAACCCGAAACCCAGAATTAGCTGGT 1183
Query 1166 TAACAAATGGAGTCCCAATAGAAATTGCCCCTGATGACCCCAGCAGAAAAATAGATGGCGATACCATTATTTTT 1239
||||||||||||||||||||||||||||.|..||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1184 TAACAAATGGAGTCCCAATAGAAATTGCTCTCGATGACCCCAGCAGAAAAATAGATGGCGATACCATTATATTT 1257
Query 1240 TCAAATGTTCAAGAAAGATCAAGTGCAGTATATCAGTGCAATGCCTCTAATGAATATGGATATTTACTGGCAAA 1313
|||||||||||||||||.||||||||.||.||||||||||||||||||||..||||||||||||||||.|||||
Sbjct 1258 TCAAATGTTCAAGAAAGCTCAAGTGCGGTTTATCAGTGCAATGCCTCTAACAAATATGGATATTTACTAGCAAA 1331
Query 1314 CGCATTTGTAAATGTGCTGGCTGAGCCACCACGAATCCTCACACCTGCAAACACACTCTACCAGGTCATTGCAA 1387
.||||||||||||||.||.|||||.|||||.||.||.||||||.|.|||||||||||.||||||||||||||||
Sbjct 1332 TGCATTTGTAAATGTTCTCGCTGAACCACCTCGGATTCTCACATCAGCAAACACACTGTACCAGGTCATTGCAA 1405
Query 1388 ACAGGCCTGCTTTACTAGACTGTGCCTTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTTAAAGGAGCTAAA 1461
|||||||||||||.|||||.||||||||||||||.||||||.|.||.|||||.||||||||||||||..|||||
Sbjct 1406 ACAGGCCTGCTTTGCTAGATTGTGCCTTCTTTGGATCTCCTATGCCTACCATTGAGTGGTTTAAAGGCACTAAA 1479
Query 1462 GGAAGTGCTCTTCATGAAGATATTTATGTTTTACATGAAAATGGAACTTTGGAAATTCCTGTGGCCCAAAAGGA 1535
|||||.||||||||||||||.|||||||||||.|||||.||||||||.||.||||||||.||||||||||||||
Sbjct 1480 GGAAGCGCTCTTCATGAAGACATTTATGTTTTGCATGATAATGGAACATTAGAAATTCCCGTGGCCCAAAAGGA 1553
Query 1536 CAGTACAGGAACTTATACGTGTGTTGCAAGGAATAAATTAGGGATGGCAAAGAATGAAGTTCACTTAGAAATCA 1609
.||||||||.||.|||||.|||||.|||.||||||||.||||||||||||||||||||||||||||.|||||||
Sbjct 1554 TAGTACAGGGACGTATACTTGTGTCGCACGGAATAAACTAGGGATGGCAAAGAATGAAGTTCACTTGGAAATCA 1627
Query 1610 AAGATGCTACATGGATCGTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAATGC 1683
|||||.|.||..|||||.|||||||.||.||.||||||||.||.||.||.|||||||.||||||||||||||||
Sbjct 1628 AAGATCCAACCAGGATCATTAAACAACCTGAGTATGCAGTCGTCCAGAGGGGGAGCAAGGTGTCCTTTGAATGC 1701
Query 1684 AAAGTGAAACATGATCACACCTT-ATCCCTCACTGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAGTGATG 1756
|.||||||||||||.|||||||| ||||| |||..|..||||||||||||||||..|.||.|||||||.|||||
Sbjct 1702 AGAGTGAAACATGACCACACCTTAATCCC-CACCATTATGTGGCTGAAGGACAATGGAGAGCTGCCCAATGATG 1774
Query 1757 AAAGGTTCACTGTTGACAAGGATCATCTAGTGGTAGCTGATGTCA---GTGACGATGACAGCGGGACCTACACG 1827
||||||||.|...|||||||||||||||.||||||.|||||||.| .|||||||| ||||.|||||||||
Sbjct 1775 AAAGGTTCTCCACTGACAAGGATCATCTGGTGGTATCTGATGTAAAGGATGACGATG---GCGGAACCTACACG 1845
Query 1828 TGTGTGGCCAACACCACTCTGGACAGCGTCTCCGCCAGCGCTGTGCTTAGCGTTGT------------------ 1883
|||..|||||||||.||.||||||||.|..||.||||||||||||||.||.|||||
Sbjct 1846 TGTACGGCCAACACAACGCTGGACAGTGCTTCGGCCAGCGCTGTGCTCAGGGTTGTCGCTCCTACTCCAACTCC 1919
Query 1884 ------------TGATGTCCCAAATCCTCCCTTTGACTTAGAACTGACAGATCAACTTGACAAAAGTGTTCAGC 1945
.||||||||.||||||||||||||.||||||.||||..||||||||||||||||||||||||
Sbjct 1920 AGCCCCCATTTACGATGTCCCGAATCCTCCCTTTGATTTAGAATTGACCAATCAACTTGACAAAAGTGTTCAGC 1993
Query 1946 TGTCATGGACCCCAGGCGATGACAACAATAGCCCCATTACAAAATTCATCATCGAATATGAAGATGCAATGCAC 2019
||.||||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||||||||.
Sbjct 1994 TGACATGGACCCCAGGCGACGACAACAATAGCCCCATTACAAAATTCATCATTGAGTATGAAGATGCAATGCAT 2067
Query 2020 AAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGCTGTCTCCTTA 2093
.|..||||||||||||.||||||..|||||||||||||||||||||||||||||||.||||||||||||||.||
Sbjct 2068 GATGCAGGGCTGTGGCGCCACCAGGCTGAAGTTTCTGGAACACAGACCACAGCCCAACTGAAGCTGTCTCCCTA 2141
Query 2094 CGTGAACTACTCCTTCCGCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGCCCAGCGAGGCCTCTGAGCAGT 2167
.|||||||||||||||||.||.|||||||.||||||||||||||..||..||||.||||||||.||.|||||||
Sbjct 2142 TGTGAACTACTCCTTCCGTGTCATGGCAGAGAACAGCATTGGGAGAAGTATGCCGAGCGAGGCATCCGAGCAGT 2215
Query 2168 ATTTGACGAAAGCCTCAGAACCAGATAAAAACCCCACAGCTGTGGAAGGACT-GGGATCAGAGCCTGATAATTT 2240
||.|.||.||||||.|||||||||||.|.||.||||..|||||||||||||| |||| |||||||.||.||.||
Sbjct 2216 ATCTTACAAAAGCCGCAGAACCAGATCAGAATCCCATGGCTGTGGAAGGACTAGGGA-CAGAGCCGGACAACTT 2288
Query 2241 GGTGATTACGTGGAAGCCCTTGAATGGTTTCGAATCTAATGGGCCAGGCCTTCAG-ACAA---GTACTGCCTCT 2310
|||||||||.|||||||||.||||||||||..||||.||||||||.|||||.||| |||| |..|||.|.|
Sbjct 2289 GGTGATTACATGGAAGCCCCTGAATGGTTTTCAATCGAATGGGCCTGGCCTCCAGTACAAAGTGAGCTGGCGC- 2361
Query 2311 TCT----------------------------------------------------------------------- 2313
|.
Sbjct 2362 -CAGAAAGATGGTGACGATGAGTGGACGTCTGTGGTTGTGGCCAATGTATCCAAATACATTGTTTCTGGCACAC 2434
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2435 CAACCTTTGTCCCATACCTGATAAAAGTTCAAGCTCTGAATGATGTGGGGTTTGCACCAGAGCCAGCTGCAGTC 2508
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2509 ATGGGGCATTCTGGAGAAGACCTTCCAATGGTGGCTCCTGGAAATGTTCGCGTCAGCGTGGTGAACAGTACGCT 2582
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2583 GGCAGAGGTGCACTGGGACCCAGTTCCTCCCAAGAGTGTCCGAGGACACTTACAAGGCTACCGGATTTACTACT 2656
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2657 GGAAGACCCAGAGCTCCTCTAAAAGAAACAGGCGCCACATTGAGAAGAAGATCCTCACCTTCCAGGGCACCAAG 2730
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2731 ACTCACGGCATGCTGCCAGGGCTGCAGCCATACAGTCACTATGCCCTCAACGTCCGAGTGGTCAACGGGAAAGG 2804
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2805 GGAGGGCCCAGCCAGCACGGACAGAGGCTTCCATACACCGGAGGGAGTCCCTAGTGCTCCCTCATCTTTGAAAA 2878
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2879 TTGTTAATCCCACACTGGACTCCCTCACTTTGGAATGGGACCCCCCAAGCCACCCAAATGGCATCCTGACTGAG 2952
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2953 TACATCTTACAATATCAGCCAATTAACAGCACACATGAGCTAGGCCCTCTGGTAGATTTAAAAATTCCTGCCAA 3026
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3027 CAAGACCCGCTGGACTTTGAAAAATTTAAATTTCAGCACTCGGTACAAGTTCTATTTCTATGCACAGACATCAG 3100
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3101 TGGGGCCAGGCAGTCAGATCACAGAGGAAGCGATAACGACTGTGGACGAAGGTAAGAAGGGCAAAGAAGAATGG 3174
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3175 AGGAAAGAAATTGTAAATGGTTCTCGAAGCTTCTTTGGGTTAAAGGGTCTAATGCCAGGAACAGCATACAAAGT 3248
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3249 TCGAGTTGGTGCTGAGGGGGACTCTGGTTTTGTGAGTTCAGAGGATGTGTTTGAGACAGGACCAGCAATGGCAA 3322
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3323 GCCGGCAAGTGGATATCGCGACCCAAGGCTGGTTCATAGGTCTAATGTGCGCTGTTGCTCTCCTCATCTTAATT 3396
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3397 TTGCTGATTGTTTGCTTCATCAGAAGAAACAAAGGTGGTAAATACCCAGTTAAAGAAAAGGAGGATGCTCATGC 3470
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3471 AGACCCTGAAATCCAGCCCATGAAGGAAGATGATGGGACGTTTGGAGAATACAGTGATGCAGAAGATCACAAGC 3544
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3545 CTTTGAAAAAAGGAAGTCGAACACCTTCAGACAGGACTGTGAAAAAAGAAGATAGCGATGATAGTCTGGTTGAC 3618
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3619 TATGGAGAGGGGGTGAACGGCCAATTCAACGAGGATGGCTCCTTTATTGGCCAATACAGTGGTAAGAAAGAGAA 3692
Query 2314 ------------------------------------------------------------------- 2313
Sbjct 3693 AGAGCCAGCAGAGGGAAATGAAAGCTCAGAGGCCCCTTCTCCTGTCAACGCAATGAACTCCTTTGTT 3759
