Nucleotide Global Alignment
Description
- Query:
- TRCN0000480539
- Subject:
- NM_000186.4
- Aligned Length:
- 3701
- Identities:
- 613
- Gaps:
- 3013
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGACTTCTAGCAAAGATTATTTGCCTTATGTTATGGGCTATTTGTGTAGCAGAAGATTGCAATGAACTTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCAAGAAGAAATACAGAAATTCTGACAGGTTCCTGGTCTGACCAAACATATCCAGAAGGCACCCAGGCTATCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAAATGCCGCCCTGGATATAGATCTCTTGGAAATGTAATAATGGTATGCAGGAAGGGAGAATGGGTTGCTCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATCCATTAAGGAAATGTCAGAAAAGGCCCTGTGGACATCCTGGAGATACTCCTTTTGGTACTTTTACCCTTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAGGAAATGTGTTTGAATATGGTGTAAAAGCTGTGTATACATGTAATGAGGGGTATCAATTGCTAGGTGAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAATTACCGTGAATGTGACACAGATGGATGGACCAATGATATTCCTATATGTGAAGTTGTGAAGTGTTTACCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGACAGCACCAGAGAATGGAAAAATTGTCAGTAGTGCAATGGAACCAGATCGGGAATACCATTTTGGACAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTACGGTTTGTATGTAACTCAGGCTACAAGATTGAAGGAGATGAAGAAATGCATTGTTCAGACGATGGTTTTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAGTAAAGAGAAACCAAAGTGTGTGGAAATTTCATGCAAATCCCCAGATGTTATAAATGGATCTCCTATATCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGAAGATTATTTATAAGGAGAATGAACGATTTCAATATAAATGTAACATGGGTTATGAATACAGTGAAAGAGG 740
Query 1 ------------------------------------------ATGT------------TGTTACTAATC----- 15
|||| |||.| |||||
Sbjct 741 AGATGCTGTATGCACTGAATCTGGATGGCGTCCGTTGCCTTCATGTGAAGAAAAATCATGTGA-TAATCCTTAT 813
Query 16 ------AAT-GTCA-TTCTGACCTT----------------------------------------GTG------ 35
||| ||.| |.||.||||| |||
Sbjct 814 ATTCCAAATGGTGACTACTCACCTTTAAGGATTAAACACAGAACTGGAGATGAAATCACGTACCAGTGTAGAAA 887
Query 36 -GGTT----TCCTG-------------TGC----TAATGGACAAG----------------------------- 58
|||| ||||| |.| .||||.|||||
Sbjct 888 TGGTTTTTATCCTGCAACCCGGGGAAATACAGCAAAATGCACAAGTACTGGCTGGATACCTGCTCCGAGATGTA 961
Query 59 ---TGAAACCTTGTGATTTTCCAGACATTAAACATGGAGGTCTATTTCATGAGAATATGCGTAGACCATACTTT 129
|||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 962 CCTTGAAACCTTGTGATTATCCAGACATTAAACATGGAGGTCTATATCATGAGAATATGCGTAGACCATACTTT 1035
Query 130 CCAGTAGCTGTAGGAAAATATTACTCCTATTACTGTGATGAACATTTTGAGACTCCTTCAGGAAGTTACTGGGA 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1036 CCAGTAGCTGTAGGAAAATATTACTCCTATTACTGTGATGAACATTTTGAGACTCCGTCAGGAAGTTACTGGGA 1109
Query 204 TTACATTCATTGCACACAAAATGGGTGGTCACCAGCAGTACCATGTCTCAGAAAATGTTATTTTCCTTATTTGG 277
|.|||||||||||||||||.||||.|||||.||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1110 TCACATTCATTGCACACAAGATGGATGGTCGCCAGCAGTACCATGCCTCAGAAAATGTTATTTTCCTTATTTGG 1183
Query 278 AAAATGGATATAATCAAAATTATGGAAGAAAGTTTGTACAGGGTAACTCTACAGAAGTTGCCTGCCATCCTGGC 351
||||||||||||||||||||.|||||||||||||||||||||||||.||||.|||.||||||||||||||||||
Sbjct 1184 AAAATGGATATAATCAAAATCATGGAAGAAAGTTTGTACAGGGTAAATCTATAGACGTTGCCTGCCATCCTGGC 1257
Query 352 TACGGTCTTCCAAAAGCGCAGACCACAGTTACATGTACGGAGAAAGGCTGGTCTCCTACTCCCAGATGCATCCG 425
||||.||||||||||||||||||||||||||||||||.||||||.|||||||||||||||||||||||||||||
Sbjct 1258 TACGCTCTTCCAAAAGCGCAGACCACAGTTACATGTATGGAGAATGGCTGGTCTCCTACTCCCAGATGCATCCG 1331
Query 426 TGTCAGAACATGCTCAAAATCAGATATAGAAATTGAAAATGGATTCATTTCCGAATCTTCCTCTATTTATAT-- 497
|||||.||||||.||.||||||..||||||.|||||.|||||.||.|||||.|||||| |..|||..||||
Sbjct 1332 TGTCAAAACATGTTCCAAATCAAGTATAGATATTGAGAATGGGTTTATTTCTGAATCT--CAGTATACATATGC 1403
Query 498 TTTAAATAAAGAAATA---CAATATAAATGTAAACCAGGATATGCAACAGCAGATG--GAAATTCTTCAGGATC 566
.||| |||||||.| .|||||.||||.||||.||||||||.||||||||||| |||| |.||||||||
Sbjct 1404 CTTA---AAAGAAAAAGCGAAATATCAATGCAAACTAGGATATGTAACAGCAGATGGTGAAA--CATCAGGATC 1472
Query 567 AATTACATGTTTGCAAAATGGATGGTCAGCACAACCAATTTGCATTACTGCTTGT-AT-------------TGC 626
||||||||||..|.||.|||||||||||||.|||||.|..|||||||...||||| || ||.
Sbjct 1473 AATTACATGTGGGAAAGATGGATGGTCAGCTCAACCCACGTGCATTAAATCTTGTGATATCCCAGTATTTATGA 1546
Query 627 ATTCC------------GTGCTCAC---------GCTCA--GAAAAGTTGTA----------CATGTCGGGGGA 667
||.|| |...|||| |||.| ||.|..|||.| ||||..||....
Sbjct 1547 ATGCCAGAACTAAAAATGACTTCACATGGTTTAAGCTGAATGACACATTGGACTATGAATGCCATGATGGTTAT 1620
Query 668 GAAA------------------------------TGAGTGCTT--AAT------TCTGAATTTC---------- 693
|||| ||.|||.|| ||| |||||.||.|
Sbjct 1621 GAAAGCAATACTGGAAGCACCACTGGTTCCATAGTGTGTGGTTACAATGGTTGGTCTGATTTACCCATATGTTA 1694
Query 694 ----------TGC------------------------------------------------------------- 696
|||
Sbjct 1695 TGAAAGAGAATGCGAACTTCCTAAAATAGATGTACACTTAGTTCCTGATCGCAAGAAAGACCAGTATAAAGTTG 1768
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1769 GAGAGGTGTTGAAATTCTCCTGCAAACCAGGATTTACAATAGTTGGACCTAATTCCGTTCAGTGCTACCACTTT 1842
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1843 GGATTGTCTCCTGACCTCCCAATATGTAAAGAGCAAGTACAATCATGTGGTCCACCTCCTGAACTCCTCAATGG 1916
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1917 GAATGTTAAGGAAAAAACGAAAGAAGAATATGGACACAGTGAAGTGGTGGAATATTATTGCAATCCTAGATTTC 1990
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1991 TAATGAAGGGACCTAATAAAATTCAATGTGTTGATGGAGAGTGGACAACTTTACCAGTGTGTATTGTGGAGGAG 2064
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2065 AGTACCTGTGGAGATATACCTGAACTTGAACATGGCTGGGCCCAGCTTTCTTCCCCTCCTTATTACTATGGAGA 2138
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2139 TTCAGTGGAATTCAATTGCTCAGAATCATTTACAATGATTGGACACAGATCAATTACGTGTATTCATGGAGTAT 2212
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2213 GGACCCAACTTCCCCAGTGTGTGGCAATAGATAAACTTAAGAAGTGCAAATCATCAAATTTAATTATACTTGAG 2286
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2287 GAACATTTAAAAAACAAGAAGGAATTCGATCATAATTCTAACATAAGGTACAGATGTAGAGGAAAAGAAGGATG 2360
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2361 GATACACACAGTCTGCATAAATGGAAGATGGGATCCAGAAGTGAACTGCTCAATGGCACAAATACAATTATGCC 2434
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2435 CACCTCCACCTCAGATTCCCAATTCTCACAATATGACAACCACACTGAATTATCGGGATGGAGAAAAAGTATCT 2508
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2509 GTTCTTTGCCAAGAAAATTATCTAATTCAGGAAGGAGAAGAAATTACATGCAAAGATGGAAGATGGCAGTCAAT 2582
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2583 ACCACTCTGTGTTGAAAAAATTCCATGTTCACAACCACCTCAGATAGAACACGGAACCATTAATTCATCCAGGT 2656
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2657 CTTCACAAGAAAGTTATGCACATGGGACTAAATTGAGTTATACTTGTGAGGGTGGTTTCAGGATATCTGAAGAA 2730
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2731 AATGAAACAACATGCTACATGGGAAAATGGAGTTCTCCACCTCAGTGTGAAGGCCTTCCTTGTAAATCTCCACC 2804
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2805 TGAGATTTCTCATGGTGTTGTAGCTCACATGTCAGACAGTTATCAGTATGGAGAAGAAGTTACGTACAAATGTT 2878
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2879 TTGAAGGTTTTGGAATTGATGGGCCTGCAATTGCAAAATGCTTAGGAGAAAAATGGTCTCACCCTCCATCATGC 2952
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2953 ATAAAAACAGATTGTCTCAGTTTACCTAGCTTTGAAAATGCCATACCCATGGGAGAGAAGAAGGATGTGTATAA 3026
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3027 GGCGGGTGAGCAAGTGACTTACACTTGTGCAACATATTACAAAATGGATGGAGCCAGTAATGTAACATGCATTA 3100
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3101 ATAGCAGATGGACAGGAAGGCCAACATGCAGAGACACCTCCTGTGTGAATCCGCCCACAGTACAAAATGCTTAT 3174
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3175 ATAGTGTCGAGACAGATGAGTAAATATCCATCTGGTGAGAGAGTACGTTATCAATGTAGGAGCCCTTATGAAAT 3248
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3249 GTTTGGGGATGAAGAAGTGATGTGTTTAAATGGAAACTGGACGGAACCACCTCAATGCAAAGATTCTACAGGAA 3322
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3323 AATGTGGGCCCCCTCCACCTATTGACAATGGGGACATTACTTCATTCCCGTTGTCAGTATATGCTCCAGCTTCA 3396
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3397 TCAGTTGAGTACCAATGCCAGAACTTGTATCAACTTGAGGGTAACAAGCGAATAACATGTAGAAATGGACAATG 3470
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3471 GTCAGAACCACCAAAATGCTTACATCCGTGTGTAATATCCCGAGAAATTATGGAAAATTATAACATAGCATTAA 3544
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3545 GGTGGACAGCCAAACAGAAGCTTTATTCGAGAACAGGTGAATCAGTTGAATTTGTGTGTAAACGGGGATATCGT 3618
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3619 CTTTCATCACGTTCTCACACATTGCGAACAACATGTTGGGATGGGAAACTGGAGTATCCAACTTGTGCAAAAAG 3692
Query 697 - 696
Sbjct 3693 A 3693
