Nucleotide Global Alignment
Description
- Query:
- TRCN0000480736
- Subject:
- XR_001737345.1
- Aligned Length:
- 4888
- Identities:
- 468
- Gaps:
- 4420
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTCAGGCCCCTCCCAGGCTCTGAGTCTCCCGGCTGCAGGCGGATGGATGGGGCTTCTTCAGGCGGTGGCGGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGCGAAGGTGGCGGCGGCAGCAGCGGCAGCGGCTATGGTGTGGTCGCTCGATTCTCCCAGTGCCTGGCTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTCGGACGTGGTTAAGAACCAACTGGTTGAGGTTCAATGCAGACAAGACGGATGTGATGCTGAAAATGTGCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGATGTTTATGTTTAATTGGTTTACAGACTGTCTGTGGACTCTTTTCCTGTCAAATTACCAGCCATCTGTTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCTTCAAGTCCAGAAATGGATGAAAGGTTTGACTGCCCATGAAAGTACAGGAGGTTCAGCAACATCAGATGAC 370
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 371 CATGAATTTGATCCATCAGCTGACATGCTGGTTCATGATTTTGATGATGAACGAACATTAGAAGAGGAAGAAAT 444
Query 3 GATGGAAGGAGAAACAAACTTCAGCTCTGAAATAGAAGATCTTGCAAGGGAAGGCGACATGCCAATTCATGAAC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATGGAAGGAGAAACAAACTTCAGCTCTGAAATAGAAGATCTTGCAAGGGAAGGCGACATGCCAATTCATGAAC 518
Query 77 TTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACCTGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACCTGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAA 592
Query 151 GAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACAGTGGCTGTAGTGGGGAAAATAAAGAGGAGAATAT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACAGTGGCTGTAGTGGGGAAAATAAAGAGGAGAATAT 666
Query 225 AAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCCAATGATGATCCATCACAATCTGTTGCTTCTCAAG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCCAATGATGATCCATCACAATCTGTTGCTTCTCAAG 740
Query 299 ATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTTTGATACAAATAGTGAAGTAGAAGAAGAATCTGAA 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTTTGATACAAATAGTGAAGTAGAAGAAGAATCTGAA 814
Query 373 GAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGGAGATTATGGTGGGCTCCATGTTTCAAGCAGAAAT 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGGAGATTATGGTGGGCTCCATGTTTCAAGCAGAAAT 888
Query 447 TCCAGTTGGCATTTGTAGATAC---------------------------------------------------- 468
||||||||||||||||||||||
Sbjct 889 TCCAGTTGGCATTTGTAGATACAAAGAAAATGAAAAAGTATATGAAAATGATGATCAGCTCCTGTGGGACCCTG 962
Query 469 -------------------------------------------------------------------------- 468
Sbjct 963 AGTACTTACCAGAAGATAAAGTGATTATATTTCTTAAAGATGCATCTAGAAGAACAGGTGATGAGAAGGGTGTA 1036
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1037 GAAGCAATTCCTGAAGGATCTCACATAAAAGACAATGAACAGGCTTTATATGAATTGGTTAAATGCAATTTTGA 1110
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1111 TACAGAAGAAGCATTGAGAAGATTAAGATTTAATGTAAAAGCAGCTAGAGGTCCGAACAAGGTCAGTTGGTGAA 1184
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1185 TGTGTAGCATTCTATTACATGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCAAACACGATTTGGAAA 1258
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1259 GAAGAAATATAATCTTCATCCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAAGTGAAAGTGCTGCAT 1332
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1333 CTAGTCGAGCACCATCCCCTCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGCACT 1406
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1407 GTAAGCACTGCTAATCAAAATGGAGTGTCATCTAATGGACCAGGTGAAATATTAAACAAAGAGGAAGTAAAAGT 1480
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1481 TGAAGGGTTACACATTAATGGACCAACAGGTGGAAATAAGAAACCACTTCATGCAGATATGGATACTAATGGTT 1554
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1555 ATGAAACAGATAACCTTACCACTGACCCAAAACTTGCCCATATGACTGCAAGAAATGAAAATGATTTTGATGAA 1628
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1629 AAAAGTGAGAGACCTGCCAAAAGGCGAAGGGTAAACAGCAATGGAAAAGAAAGTCCAGGTTCTTCTGAATTTTT 1702
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1703 CCAAGAAGCAGTCTCACATGGGAAATTTGAAGAACTTGAAAACACAGATGACTAAATTTTAGACCTATTTTACT 1776
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1777 TTCTTTGGAGTAAATTCTGGTGTGACTAAAATTTTCAGGGTTGATGGGTTACCTTAAAAAGTTGATTTCCTTGA 1850
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1851 AGCAGTTTGAAAATTTGAATTGAGTCTTAACTTTAGGAAATGAGGTTTCATAATTCTGCCTTTTGCAGATTTTT 1924
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1925 TTACTTTAAAGCTGTCAGACTCTTTTAAGGGTATTTTAAAAATTAGTAAATTTGAATGAACTAAAGATATATCT 1998
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1999 CTACCTTCTCATTTGAATATCTTTAGTTCATTCAGATTTACTAATTTTGGTAAATCTGAATGAACTAAAGATGT 2072
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2073 ATCTGTACCTTCTCATTTGATGTATTAATCATAAAATTTCACTACAAGGTAATTTTTGCTTAGTTTGATGGATG 2146
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2147 AATGGGAAACTCAAGTCCAAATTTCTGCTTAATACCAATTTCTCTGAGTTTCTTGAAATGTCTTTAAAACAGAC 2220
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2221 ATTTTTCTCACCAAACAGTTTGAGTATCTTTATTAAGGAAACCCTTACGAATCCTGAAAATTATGCTAGCATGA 2294
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2295 TTTTTTTATATATAGAAGTTTAAAAATAAACCAGGTCAGGTTTGTATATGTAAAATTGTTGACATCAATGATGT 2368
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2369 CTTTCCATATTCTTATCTGGGCTTAAGAAATACATTCTGTATTTTTCCAGATTCTTTGTAGCCTTTGAAAGATT 2442
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2443 TTTACAGTACATATGTCTTGACTGAGCTGTCCTTTCTTAATACAAAAGCGTGTATAATTTTCTTAACTTGTACA 2516
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2517 GTTGGTAAACTTTTATGAGAGGAATTGTTATTCTGAGTCTGTCAGCTTTCATTTTATTTTGCTAAGGTTTTTCT 2590
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2591 AATGAATTTTTAAGTGTTTGTGTAGTAATTAAGTCATATTTCTTATCCAGGTGGTTAAAGCATTCATAAAGGAT 2664
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2665 TATAAAATTTTTTTTTTTTTTTTTTTTTTTAAATTTCTACTTAAGGGCAAGTAATTTGAGAATTCTGAAATTAA 2738
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2739 GCATGATGCTTAGATTGCAGTTTGTTTTGCATTTGCTATAATTTTCAAAATTATTTTTGAAGCAAGACAAAAGT 2812
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2813 TTAATGTCAGCTTAAGTGCTTAAATATATCATGCTGACCAGAATCCTGTTATTTTTATATGCATCATAAAATTT 2886
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2887 CCCATTTCTGCATTAAATAAACAGAGGAGGGGGGTCAAGTGATACTTAGATATTGGCACACACAAGGAACAACT 2960
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2961 GTTGGCAGGCAGTATCGATTTTATGAAGAGAAAGTGAAGTTTGAAAACTTTTCAAACTTTTCTAGTTACAATCC 3034
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3035 AATTTTTCAGATTTGATAATGCTTTTCCAAAGTGAAAATAAGATACACAATAATCATTGCTCTGTGTGATTACA 3108
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3109 GATAGGATTATCCATCTGCATAGCCTTGTAAAAGTGCCATTTTATTTTTAGTGCTAAATTCTTGTTAAATAATG 3182
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3183 TAGTTTTATATAGCTGATAGACCAACCTATATCCAAACTTTTATAAAATATTAATTATTCTTGTTTTTCTCACA 3256
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3257 CAGGCATACTCCAAATGCTTCTTCCAGTTCATTTTTCAGCCATCAGTTCAAGAGCCAATGCCTTTTTAAAATAA 3330
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3331 AGCTTCTGTGGTCTTGTTTTTAATGGCTCAACTGTCTGATGTAATTGAGTGAAGGTTTGCACTGAGAAATTAGC 3404
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3405 ATTCAGGCCTTACCCCCATGAAGTATTACTGTTAACATATGTTCGGACTGCTTCCCTTCACCAATGTGAACAAC 3478
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3479 TTTTTTTCCCAAACAGTGTTAAAAGCCACTTTGCAACACTTGACTTCATCTTAATGTACATTCACTGTTGTTAC 3552
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3553 ATACATATCTAAGTAAATCAAAGTTTTGGGTGGAAGTGTTGAGAAGTATGAGTTTTTTGTTGTTTTTGTTTTAC 3626
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3627 TTAAAACTTTTAATTTATCCAGAATGGCAGTAGCTTTAGCAAGCAGATGGTCACAATCTGTTTTCTAAATCATT 3700
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3701 TTTTATTAAATGAATCCAAAGTATCCTAGCTCTTTGTCAAAGATGGTCTGTAGAAATGTTTTTAAAGATTAGGG 3774
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3775 ATGCTGTACTTTTTGAATTGTTGCAGTGTTGGAGATGCCATTTTCACCTTTTTAAAAAGATGCATTTTATTTGC 3848
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3849 AGGTTTGTGAAGTTCTTGCAAACTCTTACTACAGAAATGTTTTAAATACATTCTCAGGCATGTTTGCAAAAATA 3922
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3923 TGGCACATGTATACATTTTAGGAAATGTTACTTTTGTTAATCTTTAAAAAATACACCTAATGAAAGACATTCCA 3996
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3997 CTATTATGCGTAATGCTCAGCTTTTTGTAAAGAAATATTTAATTGTATTTTGTGTTTATACAGGTATTTCACAC 4070
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4071 AATAATTTGTTCTTAATGCAGCCACTATAACTTGATAAGTCATTGCACTATTTAAAAAGTTTTAGTAATATCAT 4144
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4145 GAATTTAATTTGCTTAAGATTTAGTACATTTCAGAACTTTTGAACTTTTGACAAATTGCATTGGAAAAAGAAGT 4218
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4219 CTGTTAATAGTGATTTAGTCTCCCCGCCTCATTCCCACCCCCAACAAAGCACTATCATTTTCATTTGGAATGGG 4292
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4293 TATTTTCTGTTTCATGATGTATTTTCAAATAGAGTTCAGGATCTGCAATTCAGTTCAACACAAGTTTGTTGAGC 4366
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4367 TTTAAAATGTATTTGAAGTAATATTTAAATAGGCATTTAAAATTTCAAATTAGATGTTAAATTTATGCATAGTA 4440
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4441 ATTTTGCACTGTAAAATAATTCCCTTCTCCCATTCCTTGTCTGCCATTCTGAATATGCTTATTAAAATATTTTT 4514
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4515 TTAAACATATTTGCCTACATAATACTGTGTGAATATTTTCATTAGATTAATTCACTAAGATTTTATTAGAGATT 4588
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4589 GTTTGAATGATGCATGTTATTGACAAGGCAAATATATATATATACACAGTCTGTTTCTTCTATTCCTAGACATA 4662
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4663 TTGCACTACTTTTTCAGTGGTTCTTGGTCCCCTTTACCACATCTTGGGTGATGTATTTTTGTCTTCTTCCCCTT 4736
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4737 TGCCACAAGAGATCCTTTCAGTCCCTAGACCTCCATTCACTCTGTTTCTCTTCTGCTGGATTATATAATTTAAA 4810
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4811 AATAATGTGTTCCCGTATTTTGTAGTGGAGTTCATATCACATTATGTTTTGCAAAATAAAACTTGTTTTGTCAC 4884
Query 469 ---- 468
Sbjct 4885 AATA 4888
