Nucleotide Global Alignment
Description
- Query:
- TRCN0000481178
- Subject:
- NR_161455.1
- Aligned Length:
- 5428
- Identities:
- 1202
- Gaps:
- 4223
Alignment
Query 1 ----------------------------------------------------------------ATGAGGCGAC 10
||||||||||
Sbjct 1 GCACTGAGCCTAAGCAGCCGGTGATGGCGGCAGCGGCTGTGGTGGCTGCGGCGGGTCCGGGCCCATGAGGCGAC 74
Query 11 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 148
Query 85 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 222
Query 159 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 296
Query 233 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 370
Query 307 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 444
Query 381 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 454
Sbjct 445 -------------------------------------------------------------------------- 444
Query 455 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 528
Sbjct 445 -------------------------------------------------------------------------- 444
Query 529 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 518
Query 603 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 592
Query 677 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 666
Query 751 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 740
Query 825 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGA 814
Query 899 AAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTT 888
Query 973 AAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCA 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCA 962
Query 1047 TCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGC 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGC 1036
Query 1121 AATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCA 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCA 1110
Query 1195 ACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAA 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAA 1184
Query 1269 AGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAG-- 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCC 1258
Query 1341 ----------TACTGCT-----------------ATGTGC---------------------------------- 1353
|.||.|| |.||||
Sbjct 1259 CAGTCAAATTTTCTCCTGGGGATTTCTGGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTG 1332
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1333 GAATACCCAATGGAAACAAGTGGCATAGAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCACTTCC 1406
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1407 AATACGACAGCCGAACTCTGGGCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGC 1480
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1481 GTATGAATCTATGACAGAGCAATGCTTTTAATGAATTTAAGGCAAAAAAGGTGGAGAGGGAGATGTGTGAGCAT 1554
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1555 CCTGCAAGGTGAAACGACTCAAAATGACAGTTTCAGAGAGTCAATGTCATTACATAGAACACTTCAGACACAGG 1628
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1629 AAAAATAAACGTGGATTTTAAAAAATCAATCAATGGTGCAAAAAAAAACTTAAAGCAAAATAGTATTGCTGAAC 1702
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1703 TCTTAGGCACATCAATTAATTGATTCCTCGCGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATGACTC 1776
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1777 GAAACTGACAGTATTAAGGGTAGGATGTTGCTTCTGAATCACTGTTGAGTTCTGATTGTGTTGAAGAAGGGTTA 1850
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1851 TCCTTTCATTAGGCAAAGTACAAAATTGCCTATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTTGGTC 1924
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1925 AAACTTTTTCCAGCAAAATGGAAGCAAAGACAAAAGAAACTTACCAATTGATGTTTTACGTGCAAACAACCTGA 1998
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1999 ATCTTTTTTTTATATAAATATATATTTTTCAAATAGATTTTTGATTCAGCTCATTATGAAAAACATCCCAAACT 2072
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2073 TTAAAATGCGAAATTATTGGTTGGTGTGAAGAAAGCCAGACAACTTCTGTTTCTTCTCTTGGTGAAATAATAAA 2146
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2147 ATGCAAATGAATCATTGTTAACCACAGCTGTGGCTCGTTTGAGGGATTGGGGTGGACCTGGGGTTTATTTTCAG 2220
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2221 TAACCCAGCTGCAATACCTGTCTGTAATATGAGAAAAAAAAAATGAATCTATTTAATCATTTCTACTTGCAGTA 2294
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2295 CTGCTATGTGCTAAGCTTAACTGGAAGCCTTGGAATGGGCATAAGTTGTATGTCCTACATTTCATCATTGTCCC 2368
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2369 GGGCCTGCATTGCACTGGAAAAAAAAATCGCCACCTGTTCTTACACCAGTATTTGGTTCAAGACACCAAATGTC 2442
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2443 TTCAGCCCATGGCTGAAGAACAACAGAAGAGAGTCAGGATAAAAAATACATACTGTGGTCGGCAAGGTGAGGGA 2516
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2517 GATAGGGATATCCAGGGGAAGAGGGTGTTGCTGTGGCCCACTCTCTGTCTAATCTCTTTACAGCAAATTGGTAA 2590
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2591 GATTTTCAGTTTTACTTCTTTCTACTGTTTCTGCTGTCTACCTTCCTTATATTTTTTTCCTCAACAGTTTTAAA 2664
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2665 AAGAAAAAAAGGTCTATTTTTTTTTCTCCTATACTTGGGCTACATTTTTTGATTGTAAAAATATTTGATGGCCT 2738
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2739 TTTGATGAATGTCTTCCACAGTAAAGAAAACTTAGTGGCTTAATTTAGGAAACATGTTAACAGGACACTATGTT 2812
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2813 TTTGAAATTGTAACAAAATCTACATAAATGATTTACAGGTTAAAAGAATAAAAATAAAGGTAACTTTACCTTTC 2886
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2887 TTAAATATTTCCTGCCTTAAAGAGAGCATTTCCATGACTTTAGCTGGTGAAAGGGTTTAATATCTGCAGAGCTT 2960
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2961 TATAAAAATATATTTCAGTGCATACTGGTATAATAGATGATCATGCAGTTGCAGTTGAGTTGTATCACCTTTTT 3034
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3035 TGTTTGTCTTTTATAATGTCTTCAGTCTGAGTGTGCAAAGTCAATTTGTAATATTTTGCAACCCTAGGATTTTT 3108
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3109 TTAAATAGATGCTGCTTGCTATGTTTTCAAACCTTTTTGAGCCATAGGATCCAAGCCATAAAATTCTTTATGCA 3182
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3183 TGTTGAATTCAGTCAGAAAAGAGCAAGGCTTTGCTTTTTGAAATTGCAACTCAAATGAGATGGGATGAAATCCT 3256
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3257 ATGACAGTAAGCAAAAACAGAACCATGAAAAATGATTGGACATACACCTTTTCAATTGTGGCAATAATTGAAAG 3330
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3331 AATCGATAAAAGTTCATCTTTGGACAGAAAGCCTTTAAAAAAAAAATCACTCCCTCTTCCCCCTCCTCCCTTAT 3404
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3405 TGCAGCAGCCTACTGAGAACTTTGACTGTTGCTGGTAAATTAGAAGCTACAATAATAATTAAGGGCAGAAATTA 3478
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3479 TACTTAAAAAGTGCAGATCCTTGTTCTTTGACAATTTGTGATGTCTGAAAAAACAGAACCCGAAAAGCTATGGT 3552
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3553 GATATGTACAGGCATTATTTCAGACTGTAAATGGCTTGTGATACTCTTGATACTTGTTTTCAAATATGTTTACT 3626
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3627 AACTGTAGTGTTGACTGCCTGACCAAATTCCAGTGAAACTTATACACCAAAATATTCTTCCTAGGTCCTATTTG 3700
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3701 CTAGTAACATGAGCACTGTGATTGGCTGGCTATAACCACCCCAGTTAAACCATTTTCATAATTAGTAGTGCCAG 3774
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3775 CAATAGTGGCAAACACTGCAACTTTTCTGCATAAAAAGCATTAATTGCACAGCTACCATCCACACAAATACATA 3848
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3849 GTTTTTCTGACTTCACATTTATTAAGTGAAATTTATTTCCCATGCTGTGGAAAGTTTATTGAGAACTTGTTTCA 3922
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3923 TAAATGGATATCCCTACTATGACTGTGAAAACATGTCAAGTGTCACATTAGTGTCACAGACAGAAAGCACACAC 3996
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3997 CTATGCAATATGGCTTATCTATATTTATTTGTAAAAATCCAAGCATAGTTTAAAATATGATGTCGATATTACTA 4070
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4071 GTCTTGAGTTTCTAAGAGGGTTCTTTATGTTATACCAGGTAAGTGTATAAAAGAGATTAAGTGCTTTTTTTTCA 4144
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4145 TCACTTGATTATTTTCTTTAAAATCAGCTATTACAGGATATTTTTTTATTTTATACATGCTGTTTTTTAATTAA 4218
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4219 AATATAATCACTGAAGTTTACTAATTTGATTTTATAAGGTTTGTAGCATTACAGAATAACTAAACTGGGATTTA 4292
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4293 TAAACCAGCTGTGATTAACAATGTAAAGTATTAATTATTGAACTTTGAACCAGATTTTTAGGAAAATTATGTTC 4366
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4367 TTTTTCCCCCTTTATGGTCTTAACTAATTTGAATCCTTCAAGAAGGATTTTTCCATACTATTTTTTAAGATAGA 4440
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4441 AGATAATTTGTGGGCAGGGGTGGAGGATGCATGTATGATACTCCATAAATTCAACATTCTTTACTATAGGTAAT 4514
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4515 GAATGATTATAAACAAGATGCATCTTAGATAGTATTAATATACTGAGCCTTGGATTATATATTTAATATAGGAC 4588
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4589 CTATTTTGAATATTCAGTTAATCATATGGTTCCTAGCTTACAAGGGCTAGATCTAAGATTATTCCCATGAGAAA 4662
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4663 TGTTGAATTTATGAAGAATAGATTTTAAGGCTTTGAAAATGGTTAATTTCTCAAAAACATCAATGTCCAAACAT 4736
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4737 CTACCTTTTTTCATAGGAGTAGACACTAGCAAGCTGGACAAACTATCACAAAAGTATTTGTCACACATAACCTG 4810
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4811 TGGTCTGTTGCTGATTAATACAGTACTTTTTCTTGTGTGATTCTTAACATTATAGCACAAGTATTATCTCAGTG 4884
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4885 GATTATCCGGAATAACATCTGAAAGATGGGTTCATCTATGTTTGTGTTTGCTCTTTAAACTATTGTTTCTCCTA 4958
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4959 TCCCAAGTTCGCTTTGCATCTATCAGTAAATAAAATTCTTCAGCTGCCTTATTAGGAGTGCTATGAGGGTAACA 5032
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5033 CCTGTTCTGCTTTTCATCTTGTATTTAGTTGACTGTATTATTTGATTTCGGATTGAATGAATGTAAATAGAAAT 5106
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5107 TAAATGCAAATTTGAATGAACATAAATAGAAGTGATTTATTTTTTTATTATCTTAAAGATAGGAAGGAATTAGT 5180
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5181 ATACGTATCAGGTGTATAAATGGTTTAAATTTATTTTAACATGTCAGATGTGTTCAAGTTGTCATATAAATAAA 5254
Query 1354 -------------------------- 1353
Sbjct 5255 CTATGTATGTAAGGAATGGGTTAAAA 5280
