Nucleotide Global Alignment
Description
- Query:
- TRCN0000481178
- Subject:
- NR_161457.1
- Aligned Length:
- 5428
- Identities:
- 1249
- Gaps:
- 4176
Alignment
Query 1 ----------------------------------------------------------------ATGAGGCGAC 10
||||||||||
Sbjct 1 GCACTGAGCCTAAGCAGCCGGTGATGGCGGCAGCGGCTGTGGTGGCTGCGGCGGGTCCGGGCCCATGAGGCGAC 74
Query 11 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 148
Query 85 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 222
Query 159 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 296
Query 233 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 370
Query 307 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 444
Query 381 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 518
Query 455 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 592
Query 529 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCT---------------- 650
Query 603 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 676
Sbjct 651 -------------------------------------------------------------------------- 650
Query 677 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 -----------GGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 713
Query 751 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 787
Query 825 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGA 861
Query 899 AAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 AAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTT 935
Query 973 AAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCA 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 936 AAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCA 1009
Query 1047 TCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGC 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 TCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGC 1083
Query 1121 AATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCA 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 AATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCA 1157
Query 1195 ACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAA 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1158 ACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAA 1231
Query 1269 AGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAG-- 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 AGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCC 1305
Query 1341 ----------TACTGCT-----------------ATGTGC---------------------------------- 1353
|.||.|| |.||||
Sbjct 1306 CAGTCAAATTTTCTCCTGGGGATTTCTGGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTG 1379
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1380 GAATACCCAATGGAAACAAGTGGCATAGAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCACTTCC 1453
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1454 AATACGACAGCCGAACTCTGGGCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGC 1527
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1528 GTATGAATCTATGACAGAGCAATGCTTTTAATGAATTTAAGGCAAAAAAGGTGGAGAGGGAGATGTGTGAGCAT 1601
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1602 CCTGCAAGGTGAAACGACTCAAAATGACAGTTTCAGAGAGTCAATGTCATTACATAGAACACTTCAGACACAGG 1675
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1676 AAAAATAAACGTGGATTTTAAAAAATCAATCAATGGTGCAAAAAAAAACTTAAAGCAAAATAGTATTGCTGAAC 1749
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1750 TCTTAGGCACATCAATTAATTGATTCCTCGCGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATGACTC 1823
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1824 GAAACTGACAGTATTAAGGGTAGGATGTTGCTTCTGAATCACTGTTGAGTTCTGATTGTGTTGAAGAAGGGTTA 1897
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1898 TCCTTTCATTAGGCAAAGTACAAAATTGCCTATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTTGGTC 1971
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1972 AAACTTTTTCCAGCAAAATGGAAGCAAAGACAAAAGAAACTTACCAATTGATGTTTTACGTGCAAACAACCTGA 2045
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2046 ATCTTTTTTTTATATAAATATATATTTTTCAAATAGATTTTTGATTCAGCTCATTATGAAAAACATCCCAAACT 2119
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2120 TTAAAATGCGAAATTATTGGTTGGTGTGAAGAAAGCCAGACAACTTCTGTTTCTTCTCTTGGTGAAATAATAAA 2193
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2194 ATGCAAATGAATCATTGTTAACCACAGCTGTGGCTCGTTTGAGGGATTGGGGTGGACCTGGGGTTTATTTTCAG 2267
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2268 TAACCCAGCTGCAATACCTGTCTGTAATATGAGAAAAAAAAAATGAATCTATTTAATCATTTCTACTTGCAGTA 2341
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2342 CTGCTATGTGCTAAGCTTAACTGGAAGCCTTGGAATGGGCATAAGTTGTATGTCCTACATTTCATCATTGTCCC 2415
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2416 GGGCCTGCATTGCACTGGAAAAAAAAATCGCCACCTGTTCTTACACCAGTATTTGGTTCAAGACACCAAATGTC 2489
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2490 TTCAGCCCATGGCTGAAGAACAACAGAAGAGAGTCAGGATAAAAAATACATACTGTGGTCGGCAAGGTGAGGGA 2563
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2564 GATAGGGATATCCAGGGGAAGAGGGTGTTGCTGTGGCCCACTCTCTGTCTAATCTCTTTACAGCAAATTGGTAA 2637
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2638 GATTTTCAGTTTTACTTCTTTCTACTGTTTCTGCTGTCTACCTTCCTTATATTTTTTTCCTCAACAGTTTTAAA 2711
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2712 AAGAAAAAAAGGTCTATTTTTTTTTCTCCTATACTTGGGCTACATTTTTTGATTGTAAAAATATTTGATGGCCT 2785
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2786 TTTGATGAATGTCTTCCACAGTAAAGAAAACTTAGTGGCTTAATTTAGGAAACATGTTAACAGGACACTATGTT 2859
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2860 TTTGAAATTGTAACAAAATCTACATAAATGATTTACAGGTTAAAAGAATAAAAATAAAGGTAACTTTACCTTTC 2933
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2934 TTAAATATTTCCTGCCTTAAAGAGAGCATTTCCATGACTTTAGCTGGTGAAAGGGTTTAATATCTGCAGAGCTT 3007
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3008 TATAAAAATATATTTCAGTGCATACTGGTATAATAGATGATCATGCAGTTGCAGTTGAGTTGTATCACCTTTTT 3081
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3082 TGTTTGTCTTTTATAATGTCTTCAGTCTGAGTGTGCAAAGTCAATTTGTAATATTTTGCAACCCTAGGATTTTT 3155
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3156 TTAAATAGATGCTGCTTGCTATGTTTTCAAACCTTTTTGAGCCATAGGATCCAAGCCATAAAATTCTTTATGCA 3229
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3230 TGTTGAATTCAGTCAGAAAAGAGCAAGGCTTTGCTTTTTGAAATTGCAACTCAAATGAGATGGGATGAAATCCT 3303
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3304 ATGACAGTAAGCAAAAACAGAACCATGAAAAATGATTGGACATACACCTTTTCAATTGTGGCAATAATTGAAAG 3377
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3378 AATCGATAAAAGTTCATCTTTGGACAGAAAGCCTTTAAAAAAAAAATCACTCCCTCTTCCCCCTCCTCCCTTAT 3451
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3452 TGCAGCAGCCTACTGAGAACTTTGACTGTTGCTGGTAAATTAGAAGCTACAATAATAATTAAGGGCAGAAATTA 3525
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3526 TACTTAAAAAGTGCAGATCCTTGTTCTTTGACAATTTGTGATGTCTGAAAAAACAGAACCCGAAAAGCTATGGT 3599
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3600 GATATGTACAGGCATTATTTCAGACTGTAAATGGCTTGTGATACTCTTGATACTTGTTTTCAAATATGTTTACT 3673
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3674 AACTGTAGTGTTGACTGCCTGACCAAATTCCAGTGAAACTTATACACCAAAATATTCTTCCTAGGTCCTATTTG 3747
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3748 CTAGTAACATGAGCACTGTGATTGGCTGGCTATAACCACCCCAGTTAAACCATTTTCATAATTAGTAGTGCCAG 3821
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3822 CAATAGTGGCAAACACTGCAACTTTTCTGCATAAAAAGCATTAATTGCACAGCTACCATCCACACAAATACATA 3895
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3896 GTTTTTCTGACTTCACATTTATTAAGTGAAATTTATTTCCCATGCTGTGGAAAGTTTATTGAGAACTTGTTTCA 3969
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3970 TAAATGGATATCCCTACTATGACTGTGAAAACATGTCAAGTGTCACATTAGTGTCACAGACAGAAAGCACACAC 4043
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4044 CTATGCAATATGGCTTATCTATATTTATTTGTAAAAATCCAAGCATAGTTTAAAATATGATGTCGATATTACTA 4117
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4118 GTCTTGAGTTTCTAAGAGGGTTCTTTATGTTATACCAGGTAAGTGTATAAAAGAGATTAAGTGCTTTTTTTTCA 4191
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4192 TCACTTGATTATTTTCTTTAAAATCAGCTATTACAGGATATTTTTTTATTTTATACATGCTGTTTTTTAATTAA 4265
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4266 AATATAATCACTGAAGTTTACTAATTTGATTTTATAAGGTTTGTAGCATTACAGAATAACTAAACTGGGATTTA 4339
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4340 TAAACCAGCTGTGATTAACAATGTAAAGTATTAATTATTGAACTTTGAACCAGATTTTTAGGAAAATTATGTTC 4413
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4414 TTTTTCCCCCTTTATGGTCTTAACTAATTTGAATCCTTCAAGAAGGATTTTTCCATACTATTTTTTAAGATAGA 4487
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4488 AGATAATTTGTGGGCAGGGGTGGAGGATGCATGTATGATACTCCATAAATTCAACATTCTTTACTATAGGTAAT 4561
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4562 GAATGATTATAAACAAGATGCATCTTAGATAGTATTAATATACTGAGCCTTGGATTATATATTTAATATAGGAC 4635
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4636 CTATTTTGAATATTCAGTTAATCATATGGTTCCTAGCTTACAAGGGCTAGATCTAAGATTATTCCCATGAGAAA 4709
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4710 TGTTGAATTTATGAAGAATAGATTTTAAGGCTTTGAAAATGGTTAATTTCTCAAAAACATCAATGTCCAAACAT 4783
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4784 CTACCTTTTTTCATAGGAGTAGACACTAGCAAGCTGGACAAACTATCACAAAAGTATTTGTCACACATAACCTG 4857
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4858 TGGTCTGTTGCTGATTAATACAGTACTTTTTCTTGTGTGATTCTTAACATTATAGCACAAGTATTATCTCAGTG 4931
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4932 GATTATCCGGAATAACATCTGAAAGATGGGTTCATCTATGTTTGTGTTTGCTCTTTAAACTATTGTTTCTCCTA 5005
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5006 TCCCAAGTTCGCTTTGCATCTATCAGTAAATAAAATTCTTCAGCTGCCTTATTAGGAGTGCTATGAGGGTAACA 5079
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5080 CCTGTTCTGCTTTTCATCTTGTATTTAGTTGACTGTATTATTTGATTTCGGATTGAATGAATGTAAATAGAAAT 5153
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5154 TAAATGCAAATTTGAATGAACATAAATAGAAGTGATTTATTTTTTTATTATCTTAAAGATAGGAAGGAATTAGT 5227
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5228 ATACGTATCAGGTGTATAAATGGTTTAAATTTATTTTAACATGTCAGATGTGTTCAAGTTGTCATATAAATAAA 5301
Query 1354 -------------------------- 1353
Sbjct 5302 CTATGTATGTAAGGAATGGGTTAAAA 5327
