Nucleotide Global Alignment
Description
- Query:
- TRCN0000481213
- Subject:
- XR_001780033.1
- Aligned Length:
- 2220
- Identities:
- 1329
- Gaps:
- 768
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTAGCTCTTCATGCCTTTCCAGGGAGGAAGCTGTGGACACACTGCAAAGTCAGGAAGGAACCGTCCCTGGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGCCCCAGCGCGGAGACCACCGTGGACCTCCAGGGATGGAAGGCCGCTCTGGCCCCAAGCGGAGCCTCTCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTAGACGGGCTCGAGGGAGTCCCTCTGGGCGCGGCGCCGCCGAGCGGCTCGATGCTCCGACCGGAAGTGCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACACCGTCTGCCTCCCACCCGGCTCTCTGGTCCCGGCGGTAAGATGGCGGCTACCGCGGAGTGCGATGTGGTA 296
Query 1 ATGGCGGCGACCGAGCCGGAGCTGCTCGACGACCAAGAGGCGAAGAGGGAAGCAGAGACTTTCAAGGAACAAGG 74
|||||||||||||||||.||.|||||.||.|||.||||.||.||||||||||||||..|.||||||||||||||
Sbjct 297 ATGGCGGCGACCGAGCCTGAACTGCTGGAGGACGAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAACAAGG 370
Query 75 AAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTATACAAAAGCCATAGATATGTGTCCTA 148
.||||||||.|||||.|||||.||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||
Sbjct 371 GAATGCATATTATGCTAAGAAGGACTACAACGAAGCTTATAACTATTACACAAAAGCCATAGATATGTGTCCTA 444
Query 149 AAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAAGCTCTTGGAGAT 222
|.|||||.||||||||.|||||||||||.|||||..||||||||||||||.|||||||||||||||||||||||
Sbjct 445 ACAATGCCAGCTATTACGGTAATCGAGCGGCCACACTGATGATGCTTGGACGGTTCCGGGAAGCTCTTGGAGAT 518
Query 223 GCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCACCTCTCTCT 296
||.||.|||||.||||||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.||
Sbjct 519 GCGCAGCAGTCTGTGAGGTTGGATGACAGTTTTGTCCGGGGACACCTCCGAGAAGGCAAGTGCCACCTCTCACT 592
Query 297 GGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC 370
.||||||||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.||||||||.|
Sbjct 593 TGGGAATGCAATGGCGGCATGTCGTAGTTTCCAAAGAGCCCTAGAACTGGATCATAAAAATGCCCAGGCACAGC 666
Query 371 AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTT 444
|.|||||||||||.||.|||||.||||||||.||||||||||||||||||...||||||||.|||||||||||.
Sbjct 667 AGGAGTTCAAGAACGCCAATGCCGTCATGGAGTATGAGAAAATAGCAGAAGTGGATTTTGAAAAGCGAGATTTC 740
Query 445 CGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.||
Sbjct 741 CGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGATTCAAAATTCTCAAAGC 814
Query 519 AGAATGTTTAGCAATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCA 592
||||||||||||||||||.|||||.||.|||||||||||||.||||||.|||||||||.|||||||||||||||
Sbjct 815 AGAATGTTTAGCAATGCTTGGTCGATACCCAGAAGCACAGTTTGTGGCCAGTGACATTTTACGAATGGATTCCA 888
Query 593 CCAATGCAGATGCTCTGTATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTTCAGTTT 666
|||||||.||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 889 CCAATGCTGATGCTCTGTATGTCCGGGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTGCAGTTT 962
Query 667 TTCGTACAGGCTCTCAGGATGGCTCCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAA 740
||.||||||||||||||||||||||||||||||||||||||.||..|.||.||.||||||||||||||.||.||
Sbjct 963 TTTGTACAGGCTCTCAGGATGGCTCCTGACCACGAGAAGGCTTGTGTCGCTTGTAGAAATGCCAAAGCCCTTAA 1036
Query 741 AGCAAAGAAAGAAGATGGGAATAAAGCATTTAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAG 814
|||.|||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1037 AGCCAAGAAGGAAGATGGGAATAAAGCCTTTAAGGAAGGAAATTACAAGCTAGCATATGAACTGTACACAGAAG 1110
Query 815 CCCTGGGGATAGACCCCAACAATATAAAAACAAATGCTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAG 888
||.||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCTTGGGGATAGATCCCAACAACATAAAAACAAATGCTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAG 1184
Query 889 CTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCAGTGAAGCTTGATGACACTTACATAAAAGCCTA 962
||||||.||||.||.|||||.|||||||||||.||||||||.||||||||.||||||||||||||.||||||||
Sbjct 1185 CTTAGGCAACTGGAAGATGCCATAGAAGACTGTACAAATGCGGTGAAGCTCGATGACACTTACATCAAAGCCTA 1258
Query 963 CTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGCAGTACGAGACTATGAAAAAGTATACC 1036
|.|||||||||||||||||||||||||||||||.||||.|||||||||.||.||.||||||||||||||.||.|
Sbjct 1259 CCTGAGAAGAGCTCAGTGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGGACTATGAAAAAGTGTATC 1332
Query 1037 AGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAACTGAAGAAGAGTAAGAGGAAA 1110
||||.|||||||||||||||||||||||||||||.||.|||||.||||||||||||||||||||.|||||||||
Sbjct 1333 AGACGGAGAAAACAAAAGAACACAAACAGCTCCTTAAGAATGCACAGCTGGAACTGAAGAAGAGCAAGAGGAAA 1406
Query 1111 GATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCTTATCGGAAACGGGC 1184
||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1407 GATTACTACAAGATCCTGGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCTTACCGGAAACGGGC 1480
Query 1185 CTTGATGCACCATCC----------------------------------------------------------- 1199
|||||||||||||||
Sbjct 1481 CTTGATGCACCATCCAGGTGAGCGCTGGAGGAGGTGCAGCAGAGCCCACAGCGCAGATGCAGTGGGCACCCAGG 1554
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1555 AGATCGCTCTTCAGTGGGAAGGAGGGGGTGCTGGACTCCCTGTCCTACAGGCTGTGGGAGGTGCCACATTCCAA 1628
Query 1200 -------------------------------------------------------AGATCGGCATAGTGGAGCC 1218
|||||||||.|||||.|||
Sbjct 1629 ACTTGGACAATAATAGACTTTGTTTTCCTGTGTCCCTGGTTTCACTGAATCCTCTAGATCGGCACAGTGGGGCC 1702
Query 1219 AGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAAGTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCC 1292
|||||.||.||||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||
Sbjct 1703 AGTGCCGAAGTTCAGAAGGAGGAGGAGAAGAAGTTTAAGGAAGTGGGAGAGGCCTTTACCATCCTCTCTGATCC 1776
Query 1293 CAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAGATGAGGAGGGCATGAATATGGGTGATTTTGATCCAA 1366
|||||||||||||||.||||||||||||||||||.|.|||||||||||||||||||||||.|||||||||.|||
Sbjct 1777 CAAGAAAAAGACTCGTTATGACAGTGGACAGGACTTGGATGAGGAGGGCATGAATATGGGCGATTTTGATGCAA 1850
Query 1367 ACAATATCTTCAAGGCATTCTTTGGCGGTCCTGGCGGCTTCAGCTTTGAAGCATCTGGTCCAGGGAATTTCTTT 1440
||||.|||||||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||||||||||..
Sbjct 1851 ACAACATCTTCAAGGCATTCTTCGGTGGTCCTGGGGGCTTCAGCTTTGAAGCATCTGGCCCAGGGAATTTCTAC 1924
Query 1441 TTTCAATTTGGC-------------------------------------------------------------- 1452
|||||.||||||
Sbjct 1925 TTTCAGTTTGGCTAATGAAGGCCAACTACTTAAAACCCAGAAAATGCAGACTTGCTTGGTTTAACCATGAGTGT 1998
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1999 GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTCTCAGTCGGGTGCCCTGTGTC 2072
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2073 TGTATGAGGGGTGAAGGAAAGGGGGCCAGTGCTGAGGACTAGGGAGGGAGGGAAGCCAGGGGTAGACAGGGAAG 2146
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2147 CAGGCAGCTTGTGAATTTTTGTTGTATTGTTTAACTTTATTAAAAAAGAAAAAGAATAAAATGTTTTGACCGTT 2220
