Nucleotide Global Alignment
Description
- Query:
- TRCN0000481544
- Subject:
- XM_011249306.2
- Aligned Length:
- 3297
- Identities:
- 1329
- Gaps:
- 1848
Alignment
Query 1 ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC 74
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1 ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCACATCCGGTTCAAACTGGCTCCCCC 74
Query 75 ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA 148
||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||
Sbjct 75 ATCCTCCACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAATATTCTTATTTCTGCCAACGGAACCA 148
Query 149 AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG 222
|||||||||||||||||||.|||||||||||.|||||.|||||.|||||||||||.||||||||||||||||||
Sbjct 149 AAAGAAAAGCCATTGCTGCGGAGGATCCCAGTCTAGACTTCCGCAATAATCCTACTAAGGAAGACTTGGGAAAG 222
Query 223 CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA 296
|||||.|||.|||||||||||||||||||||||||||||||||||||||||.||||.|||||||||||.|||||
Sbjct 223 CTGCAGCCATTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCGCAAAAGAGTCTTTGAAATTGCA 296
Query 297 AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC 370
|||.||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||
Sbjct 297 AGGCGTTTTCAGCAAGCAGACAGTCCTTAAGTCTCATCCTCTTTTATCTCAGTCCTATGAACTCCGAGCTGAGC 370
Query 371 TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT 444
||.|||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||
Sbjct 371 TGCTGGGGAGGCAGCCAGTTTTGGAGTTTTCCTTAGAAAACCTTAGAACCATGAATACAAGTGGTCAGACAGCT 444
Query 445 CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC 518
|||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 445 CTGCCACAAGCGCCTGTAAATGGATTGGCTAAGAAATTGACTAAAAGTTCAACACATTCGGATCATGACAATTC 518
Query 519 CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT 592
||.||||||||||||||||||||||.||||||||||.||..||||.||.||.|||||..||||.|||.||||.|
Sbjct 519 CAGTTCCCTCAATGGGGGAAAACGGTCTCTCACTTCGTCATCTCTACAAGGTGGTGAGGTGGGGGGACCTGACT 592
Query 593 CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG 666
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.|.
Sbjct 593 CTGGGAACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATATACAACACACAACTCTA 666
Query 667 TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG 740
|||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 667 TATAGCAATAATAGCACTGCAAACAAATCTTCTGTTAATTCCATGGACCAGCCGGCACTTCAAGGAAGCAGCAG 740
Query 741 ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT 814
.|||||||||.|||||||||||||||||||||||.....|||.||.||.||.|..|||||||||||.|||||||
Sbjct 741 GTTATCACCTAGTACAGACTCCAGCTCTAACTTGACAAATGTGAAGTTAGAAGTCAAAAAGTCTCCTCTGTCTT 814
Query 815 CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC 888
||||||||||||||||||||||.|||||.|||||||||||||||||||||.||||.||||||||.|||||||.|
Sbjct 815 CCATTCTTTTCAGTGCTTTAGACTCTGATACAAGGATAACAGCTTTACTGAGGCGGCAGGCTGATATTGAGATC 888
Query 889 CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT 962
||||||||.||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||.||||.||.||.||
Sbjct 889 CGTGCCCGAAGGTTACAGAAGCGATTACAGGTTGTGCAAGCCAAGCAGGTGGAGAGACATTTACAGCACCAACT 962
Query 963 GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC 1036
|||||||||||||||||.|||.|||||.|||||||||||||||||||||||.||..|.|||||||||||||||.
Sbjct 963 GGGTGGATTTTTGGAGACGACATTGAGTAAACTGCCAAACTTGGAATCCTTAAGGTCCCGGAGCCAGTTGATGT 1036
Query 1037 TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT 1110
||||.|||||||||||||||||||||||||||||||||||||||.|..||||||||||||||||||||||||||
Sbjct 1037 TGACCCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGTCTGCCACTTCAGAGGGACTTAGCAACTTT 1110
Query 1111 CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA 1184
.|||||||..||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1111 TTGAAAAGTGATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACCTGAGGTGCAGTGA 1184
Query 1185 ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA 1258
.||.||.||||||||.||||||||.|||||||||||.||||||||||||||.||||||||||||||||||||..
Sbjct 1185 GCAAGCGTTTGATTCGGATGTCACAGACAGTAGTTCCGGAGGGGAGTCTGACATTGAAGAGGAAGAACTGACTC 1258
Query 1259 GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT 1332
||||||||||.|||||..|.|||||.|||||||.|||.|||||.|||||||.|||||||||||||||.||||||
Sbjct 1259 GAGCTGATCCTGAGCAATGCCATGTGCCCCTGAAACGTAGGTCTGAATGGAGATGGGCTGCAGACCGAGCAGCT 1332
Query 1333 ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT 1406
|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1333 ATTGTCAGCCGCTGGAACTGGCTTCAGGCCCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGATAT 1406
Query 1407 TTACAAACAGATACGTGCTAATAA--GGTT-----TCTGTGTGGAGACAG------------------------ 1449
|||||||||||||||||||||||| |||| ||..||.||||.||.
Sbjct 1407 TTACAAACAGATACGTGCTAATAAGGGGTTGATAGTCCTTGGGGAGGCACCTTTCCCAGATCATACAACAGACT 1480
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1481 TACTTTCACTTAGTTCTGAGGTGAAGACAGATCATGGGAGAGATAAATTGATTGAGTCTGTTTCTCAGCCATCA 1554
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1555 GAAAACCATGGTATCCTTGTTAGTAATATTACAGAGTCATTGTCTACCAAATCATGTGGAGCACCGCGACCTGT 1628
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1629 CAATGGAGTTGTTAACAGTCTTCAGCCTGTCCTGGCAGACCAAGTTCCAGGTGACAGCTCTGATGCTGAGGAAC 1702
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1703 AATTACATAAAAAGCAAAGGCTGAATTTAGTTTCTTCATCTGATGGCACGTGTGTCGCAGCCCGAACCCGGCCT 1776
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1777 GTACTGACCTGTAAGAAACGGAGGCTTGTTAGGCCCAGCAGCATCGTTCCTCTTTCTAAGAAGGTTCACCGTAA 1850
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1851 TGTCCGCTCTGGCTGTGATGTGAATCCCTCTTGTGCACTGTGTGGTTCAGGCAGTGTGAACACCATGCCTCCTG 1924
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1925 AAATACACTATGAAGCACCTCTCTTAGAGCGTCTTTCCCAGTTGGACTCCTGCGTTCACCCTGTGCTAGCATTT 1998
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1999 CCAGATGATGTTCCCACAAGCCTGCACTTCCAGAGCATGCTGAAGTCTCAGTGGCAAAACAAGCCTTTTGACAA 2072
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2073 GATCAAACCTACCAAAAAGTTTTCTCTTAAGCACAGAGCGACCATGCCATGCAGTCTGTCAGATCCAGTTCGTA 2146
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2147 AAGACAGACACAAGTTGGTCAACTCCTTCCTTACAACAGCCAAGCTGTGCCATCAGCAAACACGGCCTGACAGG 2220
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2221 ACCCACAGGCAGCACTTAGACGGCGTGGGGGCTGTGCCCATGGTGGAGCGAGTGACAGCTCCAAAAGCAGAGCG 2294
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2295 CTTGCTCCACCTGCCGCCACCTGTGCATGACCCCACCCACAGCAAAATGAGATTGCGAGATCATTCATCTGAGA 2368
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2369 GAAGTGAAGTGTTGAAGCATCACACAGACATGAGCAGTCCGAGCTACTTGACAGCTACCCACCATCCACCCCAC 2442
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2443 AGCCCCCTGGTGAGACAGCTCTCCACCTCATCAGACACCTCCACACCCACCAGCTCGGGCTCACAAGTTGCAGC 2516
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2517 CAGCACATCTCAGCCAGTGAGGAGGAGAAGGGGAGAGAGCTCATTTGATATTAACAACATTGTCATCCCAATGT 2590
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2591 CTGTTGCTGCAACAACTCGTGTTGAGAAACTACAATACAAAGAAATCCTTACTCCAAGCTGGCGAGAGGTTGAT 2664
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2665 GTTCAGTCTCTGAAGGGGAGTCCTGATGAAGAGAATGAGGAGATCGAGGACCTATCTGATGCAGCCTTTGCGGC 2738
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2739 CCTGCATGCCAAATGTGAGGAGATGGAAAGGGCAAGGTGGCTGTGGACCACAAGTGTGCCACCCCAGCGTCGGG 2812
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2813 GCAGCAGGTCTTACAGGTCATCAGACGGCCGGACCACCCCTCAGTTGGGCAGTGCCAACCCCTCCACCCCACAG 2886
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2887 CCTGCGTCCCCTGATGTCAGTAGTAGCCACTCTCTGTCAGAATTCTCCCATGGTCAATCTCCTAGGAGTCCCAT 2960
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2961 TAGCCCAGAACTACACTCAGCCCCTCTCACCCCTGTGGCTCGGGACAGTCTGCGACACCTGGCCAGTGAAGACA 3034
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 3035 CCCGATGTTCCACACCAGAGCTGGGACTAGATGAACAGTCAGTCCAGCCATGGGAACGACGGACCTTCCCTCTG 3108
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 3109 GCCTACAGTCCCCAGGCAGAATGTGAGGAGCAGCTGGATGCACAGGACACGGCAGCCCGCTGCACTCGCCGCAC 3182
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 3183 CTCAGGCAGCAAGACTGGCCGGGAGGCAGAGGTGGCACCCACCTCGCCTCCTGTTGTCCCGCTCAAGAGTCGGC 3256
Query 1450 ----------------------------------------- 1449
Sbjct 3257 ATCTGGCAGCAACAGTCACAGCTCAGCGCCCAGCTCACAGA 3297
