Nucleotide Global Alignment
Description
- Query:
- TRCN0000481595
- Subject:
- XM_024451155.1
- Aligned Length:
- 4809
- Identities:
- 668
- Gaps:
- 4104
Alignment
Query 1 ATGGAGTCCAGGGAAACCTTAAGCAGCTCCCGGCAAAGAGGGGGCGAGTCAGACTTCCTGCCGGTCTCCTCAGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGTCCAGGGAAACCTTAAGCAGCTCCCGGCAAAGAGGGGGCGAGTCAGACTTCCTGCCGGTCTCCTCAGC 74
Query 75 CAAGCCCCCAGCTGCTCCTGGCTGTGCAGGAGAACCTTTGCTCTCCACTCCAGGACCTGGGAAGGGGATCCCGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAAGCCCCCAGCTGCTCCTGGCTGTGCAGGAGAACCTTTGCTCTCCACTCCAGGACCTGGGAAGGGGATCCCGG 148
Query 149 TGGGCGGAGAGCGCATGGAGCCAGAGGAGGAGGATGAACTAGGCTCAGGGCGGGATGTGGATTCCAACTCCAAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGGCGGAGAGCGCATGGAGCCAGAGGAGGAGGATGAACTAGGCTCAGGGCGGGATGTGGATTCCAACTCCAAC 222
Query 223 GCGGACAGTGAGAAATGGGTGGCAGGAGATGGTTTGGAAGAGCAGGAATTTTCTATCAAGGAGGCAAACTTCAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCGGACAGTGAGAAATGGGTGGCAGGAGATGGTTTGGAAGAGCAGGAATTTTCTATCAAGGAGGCAAACTTCAC 296
Query 297 AGAGGGAAGTCTGAAGCTAAAGATTCAGACCACAAAGCGGGCTAAGAAACCCCCAAAGAATTTGGAGAACTATA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAGGGAAGTCTGAAGCTAAAGATTCAGACCACAAAGCGGGCTAAGAAACCCCCAAAGAATTTGGAGAACTATA 370
Query 371 TATGTCCACCTGAGATCAAGATCACCATCAAGCAGTCTGGGGACCAGAAGGTGTCCCGTGCTGGAAAAAATAGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TATGTCCACCTGAGATCAAGATCACCATCAAGCAGTCTGGGGACCAGAAGGTGTCCCGTGCTGGAAAAAATAGC 444
Query 445 AAAGCCACGAAGGAGGAAGAAAGAAGCCACTCCAAAAAGAAGCTCCTCACAGCCAGTGACCTTGCAGCCAGTGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAGCCACGAAGGAGGAAGAAAGAAGCCACTCCAAAAAGAAGCTCCTCACAGCCAGTGACCTTGCAGCCAGTGA 518
Query 519 CCTCAAAGGATTTCAGCCACAG----------------------ATTAAAGACTCCAGTAAG------------ 558
|||||||||||||||||||||| |||.||..|||||.||.|
Sbjct 519 CCTCAAAGGATTTCAGCCACAGGCTTACGAGAGGCCCCAGAAACATTCAACTCTCCATTATGACACGGGCCTCC 592
Query 559 --GAGGAAGTC-----TG------GAAGAGAAGAGGAGGCCAAGGCATCCCATTCAAAAAGCAATTCCTGTCCC 619
.||||..|| || .||.| ||||.||| |||...|||||||| .|.| ||
Sbjct 593 CACAGGACTTCACCGGTGACACCTTAAAA----------CCAAAGCA--CCAGCAAAAAAGCA---GCAG--CC 649
Query 620 AGGA--ACGTG-------CCA-------TG-----------------------TGCTTC-TCATGCCC-----C 648
||.| ||.|| ||| || |||||| ||| |.|| |
Sbjct 650 AGAACCACATGGACTGGTCCACCAACTCTGACAGCGGACCCGTCACTCAGAATTGCTTCATCA-GTCCAGAGTC 722
Query 649 CGG------AAC--CCATTCCCCGCAAAA--CCCGGTTCTCT----CAC---TCTTCCTTTTCA---------- 695
.|| ||| |.|...||.||||.| |||| |||| |.| .||||||||.||
Sbjct 723 TGGCAGAGAAACTGCAAGCACCAGCAAGATCCCCG---CTCTTGAGCCCGTGGCTTCCTTTGCAAAGGCCCAGG 793
Query 696 ----------CAGTG-------AACCTGCAGTC--TGGGC--ACAAGAAGTA---------------------- 726
||||| .||.||.|||| |.|.| ||||.||..|
Sbjct 794 GTAAGAAAGGCAGTGCAGGGAACACGTGGAGTCAGTTGTCTAACAATAACAAAGATCTGCTCTTGGGAGGTGTG 867
Query 727 -------------------------------------------------------------------------- 726
Sbjct 868 GCTCCATCCCCAAGCAGCCACAGCTCACCAGCCCCACCCAGCAGCTCTGCTGAGTGCAACGGGCTTCAGCCCTT 941
Query 727 -------------------------------------------------------------------------- 726
Sbjct 942 GGTGGATCAAGATGGAGGAGGTACAAAGGAGCCCCCAGAACCACCTACGGTGGGCAGCAAGAAAAAGTCCAGTA 1015
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1016 AAAAAGATGTGATAAGTCAGACCATACCAAACCCAGACCTGGATTGGGTCAAGAATGCCCAGAAAGCATTTGAC 1089
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1090 AATACAGAAGGGAAAAGGGAAGGTTATTCCGCAGATAGTGCCCAAGAGGCATCACCAGCCAGGCAGAACGTGAG 1163
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1164 TTCTGCCAGTAATCCTGAAAATGACTCAAGTCATGTCCGGATTACTATCCCCATCAAGGCACCCTCTCTGGATC 1237
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1238 CAACCAACCATAAGAGGAAAAAAAGACAGTCCATTAAAGCGGTGGTGGAAAAGATCATGCCAGAGAAAGCCTTG 1311
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1312 GCTTCTGGAATCACCATGAGCAGTGAAGTAGTTAACAGGATACTTTCCAACTCTGAGGGGAATAAGAAGGATCC 1385
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1386 CCGTGTCCCTAAGTTGAGTAAAATGATAGAGAATGAGTCCCCCTCAGTTGGCCTTGAAACTGGTGGAAATGCTG 1459
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1460 AGAAAGTTATCCCAGGAGGTGTGTCTAAGCCGCGGAAGCCACCCATGGTCATGACACCTCCAACGTGCACAGAT 1533
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1534 CACTCTCCATCCAGAAAGCTGCCAGAAATCCAGCATCCAAAATTTGCTGCAAAACGAAGGTGGACTTGCAGCAA 1607
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1608 ACCAAAACCTAGCACCATGCTTCGAGAGGCAGTTATGGCCACCTCTGATAAACTGATGCTGGAGCCCCCGTCTG 1681
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1682 CATATCCCATCACCCCATCCAGCCCTCTCTACACCAACACAGACAGTCTTACTGTGATCACTCCAGTCAAAAAG 1755
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1756 AAGCGGGGACGACCAAAGAAGCAGCCTTTGCTCACAGTCGAGACGATTCATGAGGGAACTTCCACCAGCCCCGT 1829
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1830 CAGTCCCATCAGCCGAGAGTTTCCTGGCACTAAGAAAAGAAAGCGACGACGCAATTTAGCGAAGTTGGCCCAGC 1903
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1904 TAGTGCCGGGAGAGGACAAACCCATGAGCGAGATGAAATTTCACAAGAAAGTTGGAAAGCTCGGCGTGTTGGAT 1977
Query 727 -------------------------------------------------------------------------- 726
Sbjct 1978 AAGAAGACCATCAAAACTATCAATAAGATGAAGACACTCAAGAGGAAAAACATCTTGAATCAGATCTTGTCCTG 2051
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2052 TTCCAGCAGCGTTGCTCTGAAGGCAAAAGCTCCCCCAGAGACCAGCCCTGGGGCAGCAGCCATTGAAAGCAAAC 2125
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2126 TGGGCAAGCAGATTAATGTCAGCAAGAGGGGAACCATCTACATTGGCAAGAAGCGGGGCAGGAAGCCAAGAGCA 2199
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2200 GAGCTGCCACCCCCATCCGAAGAACCCAAAACAGCCATCAAGCACCCCAGGCCTGTTTCTAGCCAGCCGGATGT 2273
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2274 TCCAGCCGTGCCTTCCAACTTTCAGTCACTTGTGGCGTCTTCACCAGCAGCTATGCACCCACTTTCAACACAGT 2347
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2348 TAGGTGGGTCCAATGGCAACCTGAGCCCTGCCAGCACTGAAACCAATTTTTCAGAGTTGAAAACTATGCCAAAT 2421
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2422 CTCCAGCCCATCAGTGCTCTTCCAACCAAAACCCAAAAGGGAATACACAGTGGAACCTGGAAGCTGTCTCCACC 2495
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2496 CAGACTGATGGCCAACTCCCCTTCACACCTGTGCGAGATTGGCTCCCTAAAGGAAATCACGCTGTCCCCTGTGA 2569
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2570 GCGAGTCCCACAGTGAGGAGACGATCCCCAGCGACAGCGGCATTGGGACAGACAACAACAGCACTTCTGACCAA 2643
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2644 GCGGAGAAGAGCTCAGAATCCCGAAGGAGGTACTCTTTTGATTTCTGCTCCCTGGACAACCCGGAGGCCATTCC 2717
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2718 GTCCGACACCAGCACAAAGAACCGGCATGGCCACCGGCAAAAGCATCTCATTGTGGACAACTTTCTGGCCCACG 2791
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2792 AAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAAAGCCTGCAAAACCGCGATGACCTCCAGTTTCTGGCA 2865
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2866 GACCTGGAGGAGCTAATCACCAAGTTCCAAGTGTTCAGAATCTCCCACCGGAGTTACACCTTCTACCACGAGAA 2939
Query 727 -------------------------------------------------------------------------- 726
Sbjct 2940 TCCATATCCCAGCATTTTTCGGATTAATTTTGATCACTATTACCCGGTGCCATATATCCAGTATGACCCGTTGC 3013
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3014 TCTATCTTCGTAGGACTTCAGACTTGAAGTCAAAGAAGAAGCGTGGTAGGCCTGCAAAAACCAATGACACCATG 3087
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3088 ACAAAGGTGCCTTTTTTACAAGGGTTCAGCTACCCTATTCCCAGTGGAAGTTACTATGCACCCTATGGAATGCC 3161
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3162 TTACACATCAATGCCTATGATGAACCTTGGTTATTACGGTCAGTACCCAGCTCCTTTGTACCTATCGCACACGC 3235
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3236 TTGGAGCAGCTTCCCCATTCATGAGGCCAACAGTGCCACCACCTCAGTTCCACACAAACTCCCACGTAAAGATG 3309
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3310 TCCGGTGCAGCTAAGCATAAAGCCAAGCATGGAGTACACCTGCAGGGACCTGTTAGCATGGGCCTTGGTGACAT 3383
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3384 GCAGCCTTCTCTGAACCCTCCCAAGGTAGGCAGTGCCAGTCTGTCCAGTGGTCGGCTCCATAAGAGGAAACACA 3457
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3458 AACACAAGCATAAGCACAAGGAAGACCGGATCCTAGGGACCCATGACAACCTGAGTGGTCTTTTTGCAGGCAAA 3531
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3532 GCCACAGGCTTCTCCAGCCACATCCTGAGCGAGCGGCTGAGTAGCGCAGACAAAGAGCTCCCGCTGGTGAGTGA 3605
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3606 GAAGAACAAGCATAAGGAGAAACAGAAGCACCAGCACAGCGAAGCCGGCCACAAAGCTTCTAAGAACAACTTTG 3679
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3680 AGGTGGACACCCTGTCTACACTGTCACTTTCCGACGCCCAGCATTGGACACAGGCCAAGGAAAAAGGAGACTTG 3753
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3754 AGCAGTGAGCCTGTGGACTCATGCACGAAAAGATACTCTGGCAGTGGCGGGGATGGTGGCAGCACGAGATCAGA 3827
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3828 GAACCTGGACGTGTTCAGTGAAATGAACCCTTCGAATGACAAGTGGGACAGTGACGTGAGTGGGAGTAAAAGGA 3901
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3902 GGAGCTATGAAGGCTTTGGAACGTACAGGGAAAAGGACATCCAAGCCTTCAAGATGAACCGCAAGGAGAGAAGT 3975
Query 727 -------------------------------------------------------------------------- 726
Sbjct 3976 TCTTATGACTCCTCCATGTCTCCAGGGATGCCAAGTCCCCACTTAAAAGTGGACCAGACAGCAGTGCATAGTAA 4049
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4050 GAACGAAGGCTCAGTGCCCACCATGATGACCAGGAAGAAGCCAGCCGCAGTTGACAGTGTTACAATTCCACCAG 4123
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4124 CCCCAGTGTTATCTCTCCTTGCTGCATCTGCAGCAACGTCGGATGCAGTCGGCTCCTCCCTGAAGAAGAGGTTC 4197
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4198 AAGCGGCGGGAGATCGAAGCCATCCAGTGCGAAGTGCGGAAGATGTGCAACTACACCAAGATCCTGTCCACCAA 4271
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4272 GAAGAACCTGGACCACGTGAACAAGATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAAACAGGCAACAACT 4345
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4346 TCGTGAAGAAGAGGCGCGGGCGTCCCAGGAAGCAGCCCACCCAGTTCGATGAGGACTCCAGAGACCAAATGCCG 4419
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4420 GTGCTGGAAAAATGCATCGACCTGCCCAGCAAAAGAGGCCAGAAGCCCAGCCTGAGCCCGCTGGTGCTGGAGCC 4493
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4494 CGCCGCCAGCCAAGACACCATCATGGCCACCATCGAGGCGGTCATCCACATGGCCCGGGAGGCGCCGCCCCTGC 4567
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4568 CCCCGCCACCGCCGCCGCCCCTGCCGCCACCGCCGCCACCACCCCTGCCCCCGCCACCCCCTCTACCCAAGACC 4641
Query 727 -------------------------------------------------------------------------- 726
Sbjct 4642 CCCCGAGGCGGAAAGAGGAAACACAAACCGCAGGCCCCCGCTCAGCCCCCACAGCAGTCGCCCCCGCAGCAGCC 4715
Query 727 ------------------------------------------------------------------------- 726
Sbjct 4716 CCTTCCCCAGGAAGAGGAGGTGAAAGCCAAAAGGCAGAGGAAGTCCCGAGGGAGTGAGAGCGAGGTCCTTCCC 4788
