Nucleotide Global Alignment

Description

Query:
TRCN0000481658
Subject:
XM_011527279.3
Aligned Length:
1650
Identities:
1264
Gaps:
207

Alignment

Query    1  ------------------------------------ATGACCATGTCCAAGGAGGCAGTGACCTTCAAGGATGT  38
                                                |.||..|||   .|||||||||||||||||||||||||
Sbjct    1  ATGATAAAGAGAAGCAAAGTACTTGTATTCTGTTCAAAGATTATG---GAGGAGGCAGTGACCTTCAAGGATGT  71

Query   39  GGCAGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCTTGCCCAGAGGAAGCTGTATCGAGATGTGATGC  112
            |||.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||.|||||||||||||
Sbjct   72  GGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGC  145

Query  113  TGGAGAACTTCAGGAACCTGCTGTCAGTGGGGCATCAACCATTCCACCGAGATACTTTCCACTTTCTAAGGGAG  186
            ||||||||||||||||||||||.|||||||||||||||||.|||||||.||||||||.||||||.||||||||.
Sbjct  146  TGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATCAACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAA  219

Query  187  GAAAAGTTTTGGATGATGGATATAGCAACCCAAAGAGAAGGGAATTCAGGAGGCAAGATCCAACCTGAGATGAA  260
            |||||||||||||||||||..|.||||||||||||||||||||||||||||||||||||||||.|||||.||.|
Sbjct  220  GAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGAGAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGA  293

Query  261  GACTTTTCCAGAAGCAGGACCACATGAAGGGTGGTCCTGCCAGCAGATCTGGGAAGAAATTGCAAGTGATTTAA  334
            |.||.||||||||||||||.|||||||||.|||||||||||||||.|||||||||.|||||||||..||.||||
Sbjct  294  GTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTCCTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAA  367

Query  335  CCAGGCCTCAAGACTCTACCATAAAGAGCTCTCAGTTCTTTGAACAGGGTGATGCCCACTCCCAGGTTGAGGAA  408
            |||||.||||.|||||||.||||||.|.||||||||||||||||.|.|||||||.||.||||||||||||.|.|
Sbjct  368  CCAGGTCTCAGGACTCTATCATAAATAACTCTCAGTTCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCA  441

Query  409  GGAATATCTATAATGCACACAGGACAGAAACCTTCCAATTGTGGGAAGTGTAAACAATCCTTCAGTGATATGTC  482
            |||.||.|.|.|||.||.||||||||||||||||||.|..||||||||||||||||.|||.||||||||.|..|
Sbjct  442  GGACTACCCACAATTCATACAGGACAGAAACCTTCCCAGGGTGGGAAGTGTAAACAGTCCATCAGTGATGTTCC  515

Query  483  CATCTTTGATCTTCCTCAGCAAATACGCTCAGCAGAGAAGTCTCATTCCTGTGATGAGTGTGGAAAAAGCTTCT  556
            |||||||||||||||||||||..||..|||||.||||||||||.||.|.|||||||||||||||||||||.|||
Sbjct  516  CATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCT  589

Query  557  GTTACATCTCAGCACTTCATATTCATCAGAGAGTCCACCTGGGAGAGAAACTCTTTAAGTGTGACGTGTGTGGT  630
            |||||||||||||.||||||.|||||||||||||||||.||||||||||||||||||.||||||.||||||||.
Sbjct  590  GTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGC  663

Query  631  AAGGAATTCAGTCAGAGTTTACATCTGCAAACTCATCAGAGAGTCCATACTGGAGAGAAACCTTTCAAATGTGA  704
            ||||||||.|||||.||.|.|||||||||||||||||||||||||||.||||||||||||||.|||||||||||
Sbjct  664  AAGGAATTTAGTCAAAGCTCACATCTGCAAACTCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGA  737

Query  705  ACAATGTGGGAGAGGCTTCAGATGTAGATCAGCACTTACAGTTCATTGCAAATTACACATGGGAGAGAAACATT  778
            .||||||||||.|||.|||||..|||||||||||||||..||||||.|.||||||||||..||||||||||.||
Sbjct  738  GCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACTTAATGTTCATCGTAAATTACACACAGGAGAGAAACCTT  811

Query  779  ATAATTGTGAGGCATGTGGGAGGGCCTTCATTCATGATTTCCAGCTTCAGAAACATCAGAGAATTCACACAGGG  852
            |.|.|||||||||||||||||.|||||||||||||||||.|||||||.||.|||||.|||||||.||.||.|||
Sbjct  812  ACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGG  885

Query  853  GAGAAGCCATTCAAATGTGAGATATGTAGTGTGAGCTTCCGTCTTAGGTCAAG---------------------  905
            |||||.||||||||||||||.||||||.||..||.||||..|.||||||||||                     
Sbjct  886  GAGAAACCATTCAAATGTGATATATGTGGTAAGACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGT  959

Query  906  ---------------------------------------------------------------TCTTAATAGGC  916
                                                                           .||||||||||
Sbjct  960  TCACACAGGAGAAAAACCATTTAGGTGTGATACATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGC  1033

Query  917  ATTGTGTGGTCCACACAGGAAAGAAACCAAACAGCACTGGGGAATATGGAAAAGGCTTCATTCGTAGGCTGGAT  990
            ||||..||||||||||||||.|||||||..||||...||.|.|.|.||||||||||||.|||.|||||||.|||
Sbjct 1034  ATTGCATGGTCCACACAGGAGAGAAACCGTACAGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGAT  1107

Query  991  TTGTGTAAGCATCAGACGATCCACACAGGAGAGAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGACG  1064
            ||.|.||||||||||..|.|||||||||||||.|||||||||||||||||||||||||||||||||||||||.|
Sbjct 1108  TTTTATAAGCATCAGGTGGTCCACACAGGAGAAAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATG  1181

Query 1065  GTCCTCCTATCTTTTGATCCATCAGCGAGTCCACACTGGA----------------------------------  1104
            ||||||.|..|||||||.|||||||||||||||||.||||                                  
Sbjct 1182  GTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGG  1255

Query 1105  --------------------------------------------------GAAAAGCCATACAAATGTGACAAG  1128
                                                              |||||||||||.||||||||..||
Sbjct 1256  GATTTTATACAAATTCACAACTGTCTTCCCATCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAG  1329

Query 1129  TGTGGGAAGAGCTACATTACTAAGTCAGGTCTTGACTTGCACCACAGAGCCCACACAGGAGAGAGACCTTATAA  1202
            |||||||||.||||..|||||||||....|||||||||||||||.||.|.||||||.|||||||||||||||||
Sbjct 1330  TGTGGGAAGGGCTATGTTACTAAGTTTAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAA  1403

Query 1203  CTGTGATGACTGTGGGAAGAGCTTTAGACAGGCCTCAAGTATTTTGAATCATAAGAGACTCCATTGCCGAAAAA  1276
            .|||.|.||.||||||||||.||||||.|.|||||||||||||||||||||||||||||||||.||||..||||
Sbjct 1404  TTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCACTGCCAGAAAA  1477

Query 1277  AACCATTCAAATGTGAGGATTGTGGAAAGAAGCTTGTATACCGGTCATACCGTAAAGACCAACAAAAAAACCAC  1350
            |||||||||||||||||||.||||||||||.|||||||.||.||.||||||||||||||||.|..|.|.||.|.
Sbjct 1478  AACCATTCAAATGTGAGGACTGTGGAAAGAGGCTTGTACACAGGACATACCGTAAAGACCAGCCGAGAGACTAT  1551

Query 1351  AGTGGAGAAAATCCATCCAAATGTGAAGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTTGATATAATTTT  1424
            |||||.|||||.||||||||||||||.||.|||||||..|||||||||||||||||||||||.||||||.||||
Sbjct 1552  AGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTT  1625

Query 1425  ATCATTATTTTTAAATGACACG  1446
            ||||||||||.||||||||||.
Sbjct 1626  ATCATTATTTCTAAATGACACA  1647

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