Nucleotide Global Alignment
Description
- Query:
- TRCN0000488263
- Subject:
- XM_006532410.3
- Aligned Length:
- 2335
- Identities:
- 1070
- Gaps:
- 1109
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||.||.|||||||||||.||....||||||||.||.||||| |||
Sbjct 1 ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA 50
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA 148
| |||||..|||.||||||||||||.||.||||.||||..||||.|.|||||.|||||||..|||.
Sbjct 51 T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC 115
Query 149 CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGAT 222
|||||.|.||.||.|||.|.||||||||.||.||.||.|||||.||||||||||||||||||||.||.|||||.
Sbjct 116 CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGAC 189
Query 223 GTGACAGCACCCTTAGTGGATGAGGGAGCTCCCGGCAAGCAGGCTGCCGCGCAGCCCCACACGGAGATCCCAGA 296
|||||.||.|||.|||||||||||.|||||||||.|||||||||.||.||.|||||||||||||||||||||||
Sbjct 190 GTGACTGCGCCCCTAGTGGATGAGAGAGCTCCCGACAAGCAGGCCGCTGCCCAGCCCCACACGGAGATCCCAGA 263
Query 297 AGGAACCACAGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC 370
|||||..|||||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct 264 AGGAATTACAGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC 337
Query 371 AAG----------------------------------------------------------------------- 373
|||
Sbjct 338 AAGAACCGGAGAAGGTCGAGATTTTCTCACAAAGTTTGCTTGTCGAACCAGGGCGTCGTGAAGGCCAGGCCCCA 411
Query 374 -------------------------------------CTCGCATG----------------------------- 381
||.|||||
Sbjct 412 GATTTGGGGACCTCAGACTGGACCCGCCAACAGGTGTCTAGCATGTCTGGGGCTCCCCTCCTGCCACAAGGCCT 485
Query 382 -------------------------------------------------------------------------- 381
Sbjct 486 CAGAGAGGCTACATGTCAACCTTCGGGAACAAGACCTGAGGACATAGAGAAAAGCCACCCGGCCTCTGAGCTGC 559
Query 382 -------------------------------------------------------------------------- 381
Sbjct 560 TGCGGCGAGGGCCACCTCAGAAGGAAGGCTGGGGCCAAGACAGGCTGGGGAGTGAGGAAGAGGTGGATGAAGAT 633
Query 382 -------------------------------------------------------------------------- 381
Sbjct 634 CTCACCGTGGATGAATCATCCCAGGATTCCCCTCCCTCCCAGGCCTCCCTGACCCCTGGCAGGGCAGCCCCTCA 707
Query 382 -------------------------------------------------------------------------- 381
Sbjct 708 GGCCGGCTCCGGCTCTGTCTGCGGGGAGACCGCCAGCGTGCCTGGGCTCCCAACTGAGGGTTCCGTCCCACTTC 781
Query 382 -------------------------------------------------------------------------- 381
Sbjct 782 CTGCTGATTTCTTCTCCAAAGTCTCCGCAGAGACCCAGGCCTCACAGCCCGAAGGGCCTGGCACGGGGCCCATG 855
Query 382 -------------------------------------------------------------------------- 381
Sbjct 856 GAGGAAGGGCACGAGGCTGCCCCTGAGTTCACGTTCCACGTGGAAATCAAAGCCAGCACGCCGAAGGAACAGGA 929
Query 382 -------------------------------------------------------------------------- 381
Sbjct 930 TTTGGAAGGGGCTACAGTGGTGGGGGTCCCCGGAGAGGAGCAAAAGGCCCAGACCCAGGGCCCCTCTGTGGGAA 1003
Query 382 -----------------------------------------------------------------------GTC 384
|||
Sbjct 1004 AGGGCACCAAAGAGGCTAGCCTTCAGGAACCTCCTGGCAAGCAACCTGCAGCCGGCCTGCCCGGGAGGCCAGTC 1077
Query 385 AG---------------TAAA------------AGCAAAGACGGGACTGGAAGCGATGACAAAAAAGC------ 425
|| |||| |||||||||.||||.||||..||.||.||.|||||
Sbjct 1078 AGTCGGGTTCCTCAACTTAAAGCTCGTGTGGCCAGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGAC 1151
Query 426 -------------------------------------------------------------------------- 425
Sbjct 1152 ATCCACACCTTCCTGTGCTAAAGCCCCGAGCCATAGGCCCTGCCTTAGCCCCACACGCCCCACTCTTGGTAGCT 1225
Query 426 -------------------------------------------------------------------------- 425
Sbjct 1226 CAGACCCTTTGATCAAACCCTCCAGCCCTGCCGTGTGCCCTGAACCAGCCACCTCTCCTAAACACGTCTCTTCT 1299
Query 426 --------------------------------------------CAAGGGGGCTGATGGTAAAA------CGAA 449
||||||.||||||||.|||| ||||
Sbjct 1300 GTCACACCCCGAAATGGCAGTCCTGGAACAAAGCAGATGAAACTCAAGGGCGCTGATGGCAAAACCGGGGCGAA 1373
Query 450 GATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAA 523
||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.|
Sbjct 1374 GATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGA 1447
Query 524 CCCCGCCC-GCTCCAAAGACACCACC-----CAGCT---------------------CT--------------- 555
||.||||| || ||.|||||.||.|| ||||| ||
Sbjct 1448 CCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGCTTCCAAGCAACCGCAGAGAAAACTACCCCCTGCAGGGGC 1520
Query 556 -------------GGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGGCACTC 616
||||||||.||||||||.||.||.||.|||||||||||||||||||||||.||.||.||.|
Sbjct 1521 AAAATCTGAGAGAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGCCCCGGCTCTCCCGGAACGC 1594
Query 617 CCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGGTCCGT 690
|.|||||.|||||.||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1595 CTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAAGAAGGTGGCAGTGGTCCGC 1668
Query 691 ACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTGAAGAA 764
|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.|||||||||||||||||.|||||
Sbjct 1669 ACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGCCCATGCCAGACCTAAAGAA 1742
Query 765 TGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCAGATAATTAATA 838
|||||.|||.|||||.|||||.|||||||||||||||||||||||.|||||.||.|||||||||||||||||||
Sbjct 1743 TGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAGCCAGGAGGTGGCAAGGTGCAGATAATTAATA 1816
Query 839 AGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGGCGGC 912
||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.|||
Sbjct 1817 AGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCGAAGGATAATATCAAACACGTCCCGGGTGGAGGC 1890
Query 913 AGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACATCCA 986
||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||.||||||||
Sbjct 1891 AGTGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGGCTCGTTAGGGAACATCCA 1964
Query 987 TCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTCGAAGA 1060
|||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||
Sbjct 1965 TCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGGACAGAGTCCAGTCGAAGA 2038
Query 1061 TTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGACCTTC 1134
||||.|||.||||.||||||||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||
Sbjct 2039 TTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAAACCCACAAGCTGACCTTC 2112
Query 1135 CGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGGGACAC 1208
.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||.|||||||||||||||||
Sbjct 2113 AGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACCCGTGGTGTCTGGGGACAC 2186
Query 1209 GTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTA---------------------- 1260
.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.
Sbjct 2187 ATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACTCACCACAGCTTGCCACAC 2260
Query 1261 ----------------------------------------- 1260
Sbjct 2261 TAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG 2301
