Nucleotide Global Alignment
Description
- Query:
- TRCN0000488420
- Subject:
- XM_006532410.3
- Aligned Length:
- 2336
- Identities:
- 1048
- Gaps:
- 1134
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||.||.|||||||||||.||....||||||||.||.||||| |||
Sbjct 1 ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA 50
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA 148
| |||||..|||.||||||||||||.||.||||.||||..||||.|.|||||.|||||||..|||.
Sbjct 51 T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC 115
Query 149 CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGA---- 218
|||||.|.||.||.|||.|.||||||||.||.||.||.|||||.||||||||||||||||||||.||.||
Sbjct 116 CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGAC 189
Query 219 -------------------------------------------------------------------------- 218
Sbjct 190 GTGACTGCGCCCCTAGTGGATGAGAGAGCTCCCGACAAGCAGGCCGCTGCCCAGCCCCACACGGAGATCCCAGA 263
Query 219 ---------AGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC 283
|||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct 264 AGGAATTACAGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC 337
Query 284 AAG----------------------------------------------------------------------- 286
|||
Sbjct 338 AAGAACCGGAGAAGGTCGAGATTTTCTCACAAAGTTTGCTTGTCGAACCAGGGCGTCGTGAAGGCCAGGCCCCA 411
Query 287 -------------------------------------CTCGCATG----------------------------- 294
||.|||||
Sbjct 412 GATTTGGGGACCTCAGACTGGACCCGCCAACAGGTGTCTAGCATGTCTGGGGCTCCCCTCCTGCCACAAGGCCT 485
Query 295 -------------------------------------------------------------------------- 294
Sbjct 486 CAGAGAGGCTACATGTCAACCTTCGGGAACAAGACCTGAGGACATAGAGAAAAGCCACCCGGCCTCTGAGCTGC 559
Query 295 -------------------------------------------------------------------------- 294
Sbjct 560 TGCGGCGAGGGCCACCTCAGAAGGAAGGCTGGGGCCAAGACAGGCTGGGGAGTGAGGAAGAGGTGGATGAAGAT 633
Query 295 -------------------------------------------------------------------------- 294
Sbjct 634 CTCACCGTGGATGAATCATCCCAGGATTCCCCTCCCTCCCAGGCCTCCCTGACCCCTGGCAGGGCAGCCCCTCA 707
Query 295 -------------------------------------------------------------------------- 294
Sbjct 708 GGCCGGCTCCGGCTCTGTCTGCGGGGAGACCGCCAGCGTGCCTGGGCTCCCAACTGAGGGTTCCGTCCCACTTC 781
Query 295 -------------------------------------------------------------------------- 294
Sbjct 782 CTGCTGATTTCTTCTCCAAAGTCTCCGCAGAGACCCAGGCCTCACAGCCCGAAGGGCCTGGCACGGGGCCCATG 855
Query 295 -------------------------------------------------------------------------- 294
Sbjct 856 GAGGAAGGGCACGAGGCTGCCCCTGAGTTCACGTTCCACGTGGAAATCAAAGCCAGCACGCCGAAGGAACAGGA 929
Query 295 -------------------------------------------------------------------------- 294
Sbjct 930 TTTGGAAGGGGCTACAGTGGTGGGGGTCCCCGGAGAGGAGCAAAAGGCCCAGACCCAGGGCCCCTCTGTGGGAA 1003
Query 295 -----------------------------------------------------------------------GTC 297
|||
Sbjct 1004 AGGGCACCAAAGAGGCTAGCCTTCAGGAACCTCCTGGCAAGCAACCTGCAGCCGGCCTGCCCGGGAGGCCAGTC 1077
Query 298 AG---------------TAAA------------AGCAAAGACGGGACTGGAAGCGATGACAAAAAAGC------ 338
|| |||| |||||||||.||||.||||..||.||.||.|||||
Sbjct 1078 AGTCGGGTTCCTCAACTTAAAGCTCGTGTGGCCAGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGAC 1151
Query 339 -------------------------------------------------------------------------- 338
Sbjct 1152 ATCCACACCTTCCTGTGCTAAAGCCCCGAGCCATAGGCCCTGCCTTAGCCCCACACGCCCCACTCTTGGTAGCT 1225
Query 339 -------------------------------------------------------------------------- 338
Sbjct 1226 CAGACCCTTTGATCAAACCCTCCAGCCCTGCCGTGTGCCCTGAACCAGCCACCTCTCCTAAACACGTCTCTTCT 1299
Query 339 --------------------------------------------CAAGGGGGCTGATGGTAAAA------CGAA 362
||||||.||||||||.|||| ||||
Sbjct 1300 GTCACACCCCGAAATGGCAGTCCTGGAACAAAGCAGATGAAACTCAAGGGCGCTGATGGCAAAACCGGGGCGAA 1373
Query 363 GATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAA 436
||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.|
Sbjct 1374 GATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGA 1447
Query 437 CCCCGCCC-GCTCCAAAGACACCACC-----CAGCT---------------------CT--------------- 468
||.||||| || ||.|||||.||.|| ||||| ||
Sbjct 1448 CCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGCTTCCAAGCAACCGCAGAGAAAACTACCCCCTGCAGGGGC 1520
Query 469 -------------GGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGGCACTC 529
||||||||.||||||||.||.||.||.|||||||||||||||||||||||.||.||.||.|
Sbjct 1521 AAAATCTGAGAGAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGCCCCGGCTCTCCCGGAACGC 1594
Query 530 CCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGGTCCGT 603
|.|||||.|||||.||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1595 CTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAAGAAGGTGGCAGTGGTCCGC 1668
Query 604 ACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTGAAGAA 677
|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.|||||||||||||||||.|||||
Sbjct 1669 ACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGCCCATGCCAGACCTAAAGAA 1742
Query 678 TGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCAGATAATTAATA 751
|||||.|||.|||||.|||||.|||||||||||||||||||||||.|||||.||.|||||||||||||||||||
Sbjct 1743 TGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAGCCAGGAGGTGGCAAGGTGCAGATAATTAATA 1816
Query 752 AGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGGCGGC 825
||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.|||
Sbjct 1817 AGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCGAAGGATAATATCAAACACGTCCCGGGTGGAGGC 1890
Query 826 AGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACATCCA 899
||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||.||||||||
Sbjct 1891 AGTGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGGCTCGTTAGGGAACATCCA 1964
Query 900 TCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTCGAAGA 973
|||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||
Sbjct 1965 TCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGGACAGAGTCCAGTCGAAGA 2038
Query 974 TTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGACCTTC 1047
||||.|||.||||.||||||||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||
Sbjct 2039 TTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAAACCCACAAGCTGACCTTC 2112
Query 1048 CGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGGGACAC 1121
.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||.|||||||||||||||||
Sbjct 2113 AGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACCCGTGGTGTCTGGGGACAC 2186
Query 1122 GTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCAGCTCGCCACGC 1195
.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.|||||.||.|||||.|||||.|
Sbjct 2187 ATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACTCACCACAGCTTGCCACAC 2260
Query 1196 TAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTGG 1237
||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct 2261 TAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG- 2301
