Nucleotide Global Alignment
Description
- Query:
- TRCN0000488616
- Subject:
- XR_001745494.1
- Aligned Length:
- 2517
- Identities:
- 959
- Gaps:
- 1548
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGTGCGTCCGCGCGCCGAGGGGCGCGGCAGATCTGCGGAGAGAGGACCTGCGGGGCGCGGCCGGTCCCCTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCTGTTCCGTCACACACTGGCGTCCTGCCTCCTCCGTAGGCGGGAGAGGTGGTCTGGAGCCCCTTCGTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGTTTCCTCATGGGGTAACACGATCCTGACTCCCAGGAACCTGGCTCCTGGAGGCAGGTGACAGCCAGGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCAGAGGCCTCAGGCAGAGGGATCCTGGCGCCCCACTCCCCACGCGTCCACAGTCGCCCGCTTCCCGGGTGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACGACGCTCTGGGGAGGCTGGGCCCGCGCCCGGGTCACTGAGAGGAAGGGCGGACCCCAGGCTCAGGAGCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGGCGAGGCCCGAGAAGGGCCTGAGCGGTTATGGGGTGGGCGCAGAGTGAAGGGCAGAGCCTTGTGTATCTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGTGTGTGTGAGCATGTAAGCCTGTGTGTGTGTGCGTGGGTGTGTGGGGGGGTGTTCGAGGGTGCCATGGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGGGAGGAAGAGCCTTCCAGGCAGTGCAGACGGTAAGTGCGTAGGCCCAGTGCAGGGTTGTGTATGTGCAACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGATAGGAGATGGAGAGAGACAGGTGAGTGGTGAGGGTCCGATCGTGTGGGAGCTTTGGGGAACTTCCAAGACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGTTTTTACTGTTGCTGAGGCTGGGAGCTGTAGCAGCTGCTGGTGTCACTTTACAAGGCCCACCCCTGTGCT 740
Query 1 ---------------ATGTGCACCG-----------------------------TAGTGGACCCTCGCATTGTC 30
.|||||||.| |||.|.|.||.|||| .
Sbjct 741 GAGGACCTACCGTGGGTGTGCACGGGAGCGGCAGACGGAGATGAGTTAAGGGGTTAGCGTAGCCACGCA----G 810
Query 31 CG-GAGATACC---------TACTCA----GGCGGCAG------CTCG-GGCAGGG------------------ 65
|| |||||.|| .|| || ||.||||| | || |||||||
Sbjct 811 CGAGAGATGCCAGAGGCTGGGAC-CAGGGTGGGGGCAGAAGAGAC-CGTGGCAGGGGCTAGATTCTGGAGGAAT 882
Query 66 -----GGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATCAAGAAAATCTT 134
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CTGAAGGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATCAAGAAAATCTT 956
Query 135 TGATGCTTTTAGGGATAAGACAGATGCC---------------------------------------------- 162
||||||||||||||||||||||||||||
Sbjct 957 TGATGCTTTTAGGGATAAGACAGATGCCCAGGACATGGGCTTCCTTCTTGCTCCACCCACCCACACACCTGTGT 1030
Query 163 -----------CAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCAACATCATCAGC 225
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TTCTGTCTCTTCAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCAACATCATCAGC 1104
Query 226 CTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATGGACACTGACCTGAA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 CTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATGGACACTGACCTGAA 1178
Query 300 CGCAGTCATCCGGAAGGGCGGCCTGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCTCCTGCGGGCCA 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 CGCAGTCATCCGGAAGGGCGGCCTGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCTCCTGCGGGCCA 1252
Query 374 CCCGGTTCCTCCACTCGGGGCACGTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGGATGCCAACTGC 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 CCCGGTTCCTCCACTCGGGGCACGTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGGATGCCAACTGC 1326
Query 448 ACAGTGAAGCTGTGTGACTTTGGCCTGGCCCGCTCCCTGGGCGACCTCCCCGAGGGGCCTGAGGACCAGGCCGT 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 ACAGTGAAGCTGTGTGACTTTGGCCTGGCCCGCTCCCTGGGCGACCTCCCCGAGGGGCCTGAGGACCAGGCCGT 1400
Query 522 GACAGAGTACGTGGCCACACGCTGGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATACACCCTTGGGG 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 GACAGAGTACGTGGCCACACGCTGGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATACACCCTTGGGG 1474
Query 596 TGGACATGTGGAGTCTGGGCTGTATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCGGCACGTCCACC 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 TGGACATGTGGAGTCTGGGCTGTATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCGGCACGTCCACC 1548
Query 670 CTCCACCAGCTGGAGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGACCTCCTGGCTCTCGGCTCAGG 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 CTCCACCAGCTGGAGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGACCTCCTGGCTCTCGGCTCAGG 1622
Query 744 CTGCCGTGCCTCTGTGCTGCACCAGCTGGGGTCCCGGCCACGACAGACGCTGGATGCCCTCCTACCGCCAGACA 817
||||||||||||||||||||||||||||||||||| ||||
Sbjct 1623 CTGCCGTGCCTCTGTGCTGCACCAGCTGGGGTCCC-----------------------------------GACA 1661
Query 818 CCTCCCCAGAGGCCTTGGACCTCCTTAGGCGACTCCTGGTGTTCGCCCCGGACAAGCGGTTAAGCGCGACCCAG 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 CCTCCCCAGAGGCCTTGGACCTCCTTAGGCGACTCCTGGTGTTCGCCCCGGACAAGCGGTTAAGCGCGACCCAG 1735
Query 892 GCACTGCAGCACCCCTACGTGCAGAGGTTCCACTGCCCCAGCGACGAGTGGGCACGAGAGGCAGATGTGCGGCC 965
||||||||||||||||||||||||
Sbjct 1736 GCACTGCAGCACCCCTACGTGCAG-------------------------------------------------- 1759
Query 966 CCGGGCACACGAAGGGGTCCAGCTCTCTGTGCCTGAGTACCGCAGCCGCGTCTATCAGATGATCCTGGAGTGTG 1039
||||||||||||||||||
Sbjct 1760 --------------------------------------------------------AGATGATCCTGGAGTGTG 1777
Query 1040 GAGGCAGCAGCGGCACCTCGAGAGAGAAGGGCCCGGAGGGTGTCTCCCCAAGCCAGGCACACCTGCACAAACCC 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1778 GAGGCAGCAGCGGCACCTCGAGAGAGAAGGGCCCGGAGGGTGTCTCCCCAAGCCAGGCACACCTGCACAAACCC 1851
Query 1114 AGAGCCGACCCTCAGCTGCCTTCTAGGACACCTGTGCAGGGTCCCAGACCCAGGCCCCAGAGCAGCCCAGGCCA 1187
|||
Sbjct 1852 AGA----------------------------------------------------------------------- 1854
Query 1188 TGACCCTGCCGAGCACGAGTCCCCCCGTGCAGCCAAGAACGTTCCCAGGCAGAACTCCGCTCCCCTGCTCCAAA 1261
Sbjct 1855 -------------------------------------------------------------------------- 1854
Query 1262 CTGCTCTCCTAGGGAATGGGGAAAGGCCCCCTGGGGCGAAGGAAGCGCCCCCCTTGACACTCTCGCTGGTGAAG 1335
Sbjct 1855 -------------------------------------------------------------------------- 1854
Query 1336 CCAAGCGGGAGGGGAGCTGCGCCCTCCCTGACCTCCCAGGCTGCGGCTCAGGTGGCCAACCAGGCCCTGATCCG 1409
Sbjct 1855 -------------------------------------------------------------------------- 1854
Query 1410 GGGTGACTGGAACCGGGGCGGTGGGGTGAGGGTGGCCAGCGTACAACAGGTCCCTCCCCGGCTTCCTCCGGAGG 1483
Sbjct 1855 -------------------------------------------------------------------------- 1854
Query 1484 CCCGGCCCGGCCGGAGGATGTTCAGCACCTCTGCCTTGCAGGGTGCCCAGGGGGGTGCCAGGGCTTTGCTTGGA 1557
Sbjct 1855 -------------------------------------------------------------------------- 1854
Query 1558 GGCTACTCCCAAGCCTACGGGACTGTCTGCCACTCGGCACTGGGCCACCTGCCCCTGCTGGAGGGGCACCATGT 1631
Sbjct 1855 -------------------------------------------------------------------------- 1854
Query 1632 G 1632
Sbjct 1855 - 1854
