Nucleotide Global Alignment

Description

Query:
TRCN0000488786
Subject:
XM_006522139.3
Aligned Length:
3309
Identities:
3004
Gaps:
53

Alignment

Query    1  ATGAACCACCAGCAGCAGCAGCAGCAGCAGAAAGCGGGCGAGCAGCAG--TTGAGCGAGCCCGAGGACATGGAG  72
                                          |..||.|| ||.|..|||  |||.||.|                
Sbjct    1  ------------------------------ATGGCTGG-GAACTACAGGCTTGGGCAA----------------  27

Query   73  ATGGAAGCGGGAGATACAGATGACCCACCAAGAATTACTCAGAACCCTGTGATCAATGGGAATGTGGCCCTGAG  146
               |||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||..|||||||
Sbjct   28  ---GAAGCTGGAGATACAGATGACCCACCAAGAATTACTCAGAACCCTGTCATCAATGGGAATGTAACCCTGAG  98

Query  147  TGATGGACACAACACCGCGGAGGAGGACATGGAGGATGACACCAGTTGGCGCTCCGAGGCAACCTTTCAGTTCA  220
            ||||||.||||.||.|||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   99  TGATGGGCACAGCAACGCAGAAGAGGACATGGAGGATGACACCAGTTGGCGCTCCGAGGCAACCTTTCAGTTCA  172

Query  221  CTGTGGAGCGCTTCAGCAGACTGAGTGAGTCGGTCCTTAGCCCTCCGTGTTTTGTGCGAAATCTGCCATGGAAG  294
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  173  CTGTCGAGCGCTTCAGCAGACTGAGTGAGTCGGTCCTTAGCCCTCCGTGTTTTGTGCGAAATCTGCCATGGAAG  246

Query  295  ATTATGGTGATGCCACGCTTTTATCCAGACAGACCACACCAAAAAAGCGTAGGATTCTTTCTCCAGTGCAATGC  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  247  ATTATGGTGATGCCACGCTTTTATCCAGACAGACCACACCAAAAAAGCGTAGGATTCTTTCTCCAGTGCAATGC  320

Query  369  TGAATCTGATTCCACGTCATGGTCTTGCCATGCACAAGCAGTGCTGAAGATAATAAATTACAGAGATGATGAAA  442
            |||||||||.||||||||.|||||.|||||.||||||||||||||||||||||||||||||||.||||||||.|
Sbjct  321  TGAATCTGACTCCACGTCGTGGTCCTGCCACGCACAAGCAGTGCTGAAGATAATAAATTACAGGGATGATGACA  394

Query  443  AGTCGTTCAGTCGTCGTATTAGTCATTTGTTCTTCCATAAAGAAAATGATTGGGGATTTTCCAATTTTATGGCC  516
            |.||.|||||.||.||.||.||.||.|||||||||||.||.|||||.||.||||||||.||.|||||.||||||
Sbjct  395  AATCATTCAGCCGGCGAATCAGCCACTTGTTCTTCCACAAGGAAAACGACTGGGGATTCTCTAATTTCATGGCC  468

Query  517  TGGAGTGAAGTGACCGATCCTGAGAAAGGATTTATAGATGATGACAAAGTTACCTTTGAAGTCTTTGTACAGGC  590
            ||||||||||||||.|||||||||||||||||.||.||||||||||||||.|||||||||||.|||||||||||
Sbjct  469  TGGAGTGAAGTGACTGATCCTGAGAAAGGATTCATCGATGATGACAAAGTCACCTTTGAAGTTTTTGTACAGGC  542

Query  591  GGATGCTCCCCATGGAGTTGCGTGGGATTCAAAGAAGCACACAGGCTACGTCGGCTTAAAGAATCAGGGAGCGA  664
            .||||||||||||||||||||||||||.|||||||||||.||.|||||.|||||||||||||||||||||||.|
Sbjct  543  AGATGCTCCCCATGGAGTTGCGTGGGACTCAAAGAAGCATACTGGCTATGTCGGCTTAAAGAATCAGGGAGCAA  616

Query  665  CTTGTTACATGAACAGCCTGCTACAGACGTTATTTTTCACGAATCAGCTACGAAAGGCTGTGTACATGATGCCA  738
            |.|||||||||||.|||.||||.|||||.||.||||||||.||||||.||||||||||||||||||||||||||
Sbjct  617  CGTGTTACATGAATAGCTTGCTGCAGACCTTGTTTTTCACAAATCAGTTACGAAAGGCTGTGTACATGATGCCA  690

Query  739  ACCGAGGGGGATGATTCGTCTAAAAGCGTCCCTTTAGCATTACAAAGAGTGTTCTATGAATTACAGCATAGTGA  812
            ||.|||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.||
Sbjct  691  ACAGAGGGCGATGATTCATCTAAAAGCGTCCCTTTAGCATTACAAAGAGTGTTCTATGAATTACAGCACAGCGA  764

Query  813  TAAACCTGTAGGAACAAAAAAGTTAACAAAGTCATTTGGGTGGGAAACTTTAGATAGCTTCATGCAACATGATG  886
            |||.||.|||||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  765  TAAGCCCGTAGGAACAAAAAAGCTCACAAAGTCATTTGGGTGGGAAACTTTAGATAGCTTCATGCAACACGATG  838

Query  887  TTCAGGAGCTTTGTCGAGTGTTGCTCGATAATGTGGAAAATAAGATGAAAGGCACCTGTGTAGAGGGCACCATA  960
            ||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  839  TTCAAGAGCTTTGTCGAGTGTTGCTTGATAATGTGGAAAATAAGATGAAAGGCACCTGTGTAGAGGGCACCATT  912

Query  961  CCCAAATTATTCCGCGGCAAAATGGTGTCCTATATCCAGTGTAAAGAAGTAGACTATCGGTCTGATAGAAGAGA  1034
            ||.||.||||||||.||||||||||||||||||||.|||||.|||||.||||||||.||.||||||||.|||||
Sbjct  913  CCAAAGTTATTCCGAGGCAAAATGGTGTCCTATATTCAGTGCAAAGACGTAGACTACCGTTCTGATAGGAGAGA  986

Query 1035  AGATTATTATGATATCCAGCTAAGTATCAAAGGAAAGAAAAATATATTTGAATCATTTGTGGATTATGTGGCAG  1108
            |||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  987  AGATTATTATGATATCCAGCTAAGTATAAAAGGAAAGAAAAACATATTTGAATCATTTGTGGATTATGTGGCAG  1060

Query 1109  TAGAACAGCTCGATGGGGACAATAAATACGACGCTGGGGAACATGGCTTACAGGAAGCAGAGAAAGGTGTGAAA  1182
            |||||||.||.||.||.||||||||||||||.||||||||.||||||.|.|||||.||||||||||||||||||
Sbjct 1061  TAGAACAACTAGACGGTGACAATAAATACGATGCTGGGGAGCATGGCCTGCAGGAGGCAGAGAAAGGTGTGAAA  1134

Query 1183  TTCCTAACATTGCCACCAGTGTTACATCTACAACTGATGAGATTTATGTATGACCCTCAGACGGACCAAAATAT  1256
            ||||||||||||||.|||||||||||.||.|||||.|||||.||.||||||||||||||||||||||||||.||
Sbjct 1135  TTCCTAACATTGCCCCCAGTGTTACACCTGCAACTTATGAGGTTCATGTATGACCCTCAGACGGACCAAAACAT  1208

Query 1257  CAAGATCAATGATAGGTTTGAATTCCCAGAGCAGTTACCACTTGATGAATTTTTGCAAAAAACAGATCCTAAGG  1330
            ||||||||||||.||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1209  CAAGATCAATGACAGGTTTGAGTTTCCAGAACAGTTACCACTTGATGAATTTTTGCAAAAAACAGACCCTAAGG  1282

Query 1331  ACCCTGCAAATTATATTCTTCATGCAGTCCTGGTTCATAGTGGAGATAATCATGGTGGACATTATGTGGTTTAT  1404
            |||||||||||||||||||.|||||||||.|||||||.||||||||||||||||||||||||||.||||||||.
Sbjct 1283  ACCCTGCAAATTATATTCTCCATGCAGTCTTGGTTCACAGTGGAGATAATCATGGTGGACATTACGTGGTTTAC  1356

Query 1405  CTAAACCCCAAAGGGGATGGCAAATGGTGTAAATTTGATGACGACGTGGTGTCAAGGTGTACTAAAGAGGAAGC  1478
            ||||||||||||||||||||||||||||||||.||.|||||.||||||||.||.||||||||||||||.|||||
Sbjct 1357  CTAAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCGATGATGACGTGGTATCCAGGTGTACTAAAGAAGAAGC  1430

Query 1479  AATTGAGCACAATTATGGGGGTCACGATGACGACCTGTCTGTTCGACACTGCACTAATGCTTACATGTTAGTCT  1552
            .|||||||||||||||||||||||.|||||.||.||||||||||||||||||||.|||||.||.||||||||.|
Sbjct 1431  CATTGAGCACAATTATGGGGGTCATGATGATGATCTGTCTGTTCGACACTGCACAAATGCCTATATGTTAGTGT  1504

Query 1553  ACATCAGGGAATCAAAACTGAGTGAAGTTTTACAGGCGGTCACCGACCATGATATTCCTCAGCAGTTGGTGGAG  1626
            ||||||||||||||||.||.||||||||.|||||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1505  ACATCAGGGAATCAAAGCTAAGTGAAGTGTTACAAGCTGTCACCGACCATGATATTCCTCAGCAGTTGGTGGAA  1578

Query 1627  CGATTACAAGAAGAGAAAAGGATCGAGGCTCAGAAGCGGAAGGAGCGGCAGGAAGCCCATCTCTATATGCAAGT  1700
            |||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1579  CGATTGCAAGAAGAGAAAAGGATCGAGGCTCAGAAGCGGAAGGAGCGGCAGGAAGCCCATCTCTACATGCAAGT  1652

Query 1701  GCAGATAGTCGCAGAGGACCAGTTTTGTGGCCACCAAGGGAATGACATGTACGATGAAGAAAAAGTGAAATACA  1774
            |||||||||.|||||||||||||||||||||||||||||.||||||||||||||.||.||.|||||||..||||
Sbjct 1653  GCAGATAGTTGCAGAGGACCAGTTTTGTGGCCACCAAGGAAATGACATGTACGACGAGGAGAAAGTGAGGTACA  1726

Query 1775  CTGTGTTCAAAGTATTGAAGAACTCCTCGCTTGCTGAGTTTGTTCAGAGCCTCTCTCAGACCATGGGATTTCCA  1848
            ||||||||||.||..|||||||||||||.||.||.||||||||||||||||||||.|||||||||||.||||||
Sbjct 1727  CTGTGTTCAAGGTTCTGAAGAACTCCTCCCTGGCCGAGTTTGTTCAGAGCCTCTCCCAGACCATGGGGTTTCCA  1800

Query 1849  CAAGATCAAATTCGATTGTGGCCCATGCAAGCAAGGAGTAATGGAACAAAACGACCAGCAATGTTAGATAATGA  1922
            ||||||||.||||||||.|||||.|||||||||||.||||||||||||||.||.||.|||||||||||||||||
Sbjct 1801  CAAGATCAGATTCGATTATGGCCTATGCAAGCAAGAAGTAATGGAACAAAGCGGCCTGCAATGTTAGATAATGA  1874

Query 1923  AGCCGACGGCAATAAAACAATGATTGAGCTCAGTGATAATGAAAACCCTTGGACAATATTCCTGGAAACAGTTG  1996
            |||.|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1875  AGCTGACGGCAATAAAACAATGATTGAACTGAGTGATAATGAAAACCCTTGGACAATATTCCTGGAAACAGTTG  1948

Query 1997  ATCCCGAGCTGGCTGCTAGTGGAGCGACCTTACCCAAGTTTGATAAAGATCATGATGTAATGTTATTTTTGAAG  2070
            ||||.||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1949  ATCCTGAGCTGGCTGCTAGTGGAGCAACATTGCCCAAGTTTGATAAAGATCATGATGTAATGTTATTTTTGAAG  2022

Query 2071  ATGTATGATCCCAAAACGCGGAGCTTGAATTACTGTGGGCATATCTACACACCAATATCCTGTAAAATACGTGA  2144
            |||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 2023  ATGTATGATCCTAAAACCCGGAGCTTGAATTACTGTGGACATATCTACACACCCATATCCTGTAAAATACGTGA  2096

Query 2145  CTTGCTCCCAGTTATGTGTGACAGAGCAGGATTTATTCAAGATACTAGCCTTATCCTCTATGAGGAAGTTAAAC  2218
            |||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|
Sbjct 2097  CTTGCTCCCGGTTATGTGTGACAGAGCAGGATTTATCCAGGATACTAGCCTTATCCTCTATGAGGAAGTTAAGC  2170

Query 2219  CGAATTTAACAGAGAGAATTCAGGACTATGACGTGTCTCTTGATAAAGCCCTTGATGAACTAATGGATGGTGAC  2292
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.||||||||||||
Sbjct 2171  CGAATTTAACAGAGAGAATTCAGGACTATGATGTGTCTCTTGATAAAGCCCTTGATGAGCTGATGGATGGTGAC  2244

Query 2293  ATCATAGTATTTCAGAAGGATGACCCTGAAAATGATAACAGTGAATTACCCACCGCAAAGGAGTATTTCCGAGA  2366
            ||||||||.|||||||||||||||||.|||||.|||||||||||..|.|||||.||.||.|||||||||.||||
Sbjct 2245  ATCATAGTGTTTCAGAAGGATGACCCAGAAAACGATAACAGTGAGCTGCCCACTGCTAAAGAGTATTTCAGAGA  2318

Query 2367  TCTCTACCACCGCGTTGATGTCATTTTCTGTGATAAAACAATCCCTAATGATCCTGGATTTGTGGTTACGTTAT  2440
            ||||||||||||.||.||.|||||.||||||||.|||||.|||||.|||||.||||||||||||||.||.||||
Sbjct 2319  TCTCTACCACCGGGTCGACGTCATCTTCTGTGACAAAACGATCCCCAATGACCCTGGATTTGTGGTCACATTAT  2392

Query 2441  CAAATAGAATGAATTATTTTCAGGTTGCAAAGACAGTTGCACAGAGGCTCAACACAGATCCAATGTTGCTGCAG  2514
            |||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||.||.|||.||||||||
Sbjct 2393  CAAATAGGATGAACTATTTTCAGGTTGCAAAGACAGTTGCACAGAGGCTCAACACAGACCCCATGCTGCTGCAG  2466

Query 2515  TTTTTCAAGTCTCAAGGTTATAGGGATGGCCCAGGTAATCCTCTTAGACATAATTATGAAGGTACTTTAAGAGA  2588
            ||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||.|||||||||||||||||
Sbjct 2467  TTTTTCAAGTCTCAAGGTTATAGGGACGGCCCCGGTAATCCTCTTAGGCATAATTACGAAGGTACTTTAAGAGA  2540

Query 2589  TCTTCTACAGTTCTTCAAGCCTAGACAACCTAAGAAACTTTACTATCAGCAGCTTAAGATGAAAATCACAGACT  2662
            |||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 2541  TCTTCTACAATTCTTCAAGCCAAGACAACCTAAGAAACTTTACTATCAGCAACTTAAGATGAAAATCACAGACT  2614

Query 2663  TTGAGAACAGGCGAAGTTTTAAATGTATATGGTTAAACAGCCAATTTAGGGAAGAGGAAATAACACTATATCCA  2736
            |||||||||||.||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 2615  TTGAGAACAGGAGAAGTTTTAAGTGTATATGGTTAAACAGCCAATTTAGGGAAGAGGAAATAACACTATACCCA  2688

Query 2737  GACAAGCATGGGTGTGTCCGGGACCTGTTAGAAGAATGTAAAAAGGCCGTGGAGCTTGGGGAGAAAGCATCAGG  2810
            |||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.||.|||||||||||
Sbjct 2689  GACAAGCATGGCTGTGTCCGGGACCTGTTAGAAGAATGTAAAAAAGCCGTGGAGCTCGGTGACAAAGCATCAGG  2762

Query 2811  GAAACTTAGGCTGCTAGAAATTGTAAGCTACAAAATCATTGGTGTTCATCAAGAAGATGAACTATTAGAATGTT  2884
            ||.|||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||.|
Sbjct 2763  GAGACTTAGGCTGCTAGAAATTGTGAGCTACAAAATTATTGGTGTGCATCAAGAAGATGAACTATTAGAATGCT  2836

Query 2885  TATCTCCTGCAACGAGCCGGACGTTTCGAATAGAGGAAATCCCTTTGGACCAGGTGGACATAGACAAAGAGAAT  2958
            ||||||||||||||||.|||||.|||.|||||||||||||.||||||||||||||.||||||||.||.||.||.
Sbjct 2837  TATCTCCTGCAACGAGTCGGACTTTTAGAATAGAGGAAATACCTTTGGACCAGGTAGACATAGATAAGGAAAAC  2910

Query 2959  GAGATGCTTGTCACAGTGGCGCATTTCCACAAAGAGGTCTTCGGAACGTTCGGAATCCCGTTTTTGCTGAGGAT  3032
            ||||||||..||||||||||.|||||||||||||||||.||.||.|||||.|||||.||.||||||||.|||||
Sbjct 2911  GAGATGCTAATCACAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGTTTGGAATTCCATTTTTGCTAAGGAT  2984

Query 3033  ACACCAGGGCGAGCATTTTCGAGAAGTGATGAAGCGAATCCAGAGCCTGCTGGACATCCAGGAGAAGGAGTTTG  3106
            |||||||||.||||||||.|||||.|||||||||||.||.||||||||||||||||||||||||||||||||||
Sbjct 2985  ACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTGCTGGACATCCAGGAGAAGGAGTTTG  3058

Query 3107  AGAAGTTTAAATTTGCAATTGTAATGATGGGCCGACACCAGTACATAAATGAAGACGAGTATGAAGTAAATTTG  3180
            |.||||||||||||||||||||.|||||||||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct 3059  AAAAGTTTAAATTTGCAATTGTCATGATGGGCCGGCACCAGTACATCAATGAAGATGAGTATGAAGTAAATTTG  3132

Query 3181  AAAGACTTTGAGCCACAGCCCGGTAATATGTCTCATCCTCGGCCTTGGCTAGGGCTCGACCACTTCAACAAAGC  3254
            ||.||||||||||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 3133  AAGGACTTTGAGCCACAACCTGGTAACATGTCTCATCCTCGGCCTTGGCTAGGGCTTGACCACTTCAACAAAGC  3206

Query 3255  CCCAAAGAGGAGTCGCTACACTTACCTTGAAAAGGCCATTAAAATCCATAACG  3307
            |||||||||||||||||||||||||||.||||||||.|||||||||||.||| 
Sbjct 3207  CCCAAAGAGGAGTCGCTACACTTACCTAGAAAAGGCAATTAAAATCCACAAC-  3258

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