Nucleotide Global Alignment
Description
- Query:
- TRCN0000488826
- Subject:
- NM_001285454.1
- Aligned Length:
- 1312
- Identities:
- 875
- Gaps:
- 296
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||.||.|||||||||||.||....||||||||.||.||||| |||
Sbjct 1 ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA 50
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA 148
| |||||..|||.||||||||||||.||.||||.||||..||||.|.|
Sbjct 51 T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAA------------------ 97
Query 149 CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGCT 222
||||.
Sbjct 98 ---------------------------------------------------------------------AAGCC 102
Query 223 GAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGCTCGCATGGT 296
||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.||||||||..|||.
Sbjct 103 GAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTCAAGCTCGTGTGGC 176
Query 297 CAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAAA------CGAAGA 364
| |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||| ||||||
Sbjct 177 C------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAAACCGGGGCGAAGA 244
Query 365 TCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACC 438
||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.|||
Sbjct 245 TCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGACC 318
Query 439 CCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCC 511
.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.||||||||||||||||
Sbjct 319 ACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGCC 391
Query 512 CCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAG 585
|||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.||||||||||||||||||
Sbjct 392 CCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAAG 465
Query 586 AAGGTGGCAGTTGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCC 659
|||||||||||.|||||.|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.|||||
Sbjct 466 AAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGCC 539
Query 660 CATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGA 733
||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct 540 CATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG------------- 600
Query 734 AGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAA 807
Sbjct 601 -------------------------------------------------------------------------- 600
Query 808 CACGTCCCGGGAGGCGGCAATGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGG 881
||.|||||.|||||.|||||||||||||||||.||.||.|||||||||||.|||||||||||||||||
Sbjct 601 ------CCAGGAGGTGGCAAGGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGG 668
Query 882 CTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGG 955
|||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||
Sbjct 669 CTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGG 742
Query 956 ACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAA 1029
||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.|||||.|||||||||
Sbjct 743 ACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAA 816
Query 1030 ACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCC 1103
||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||
Sbjct 817 ACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACC 890
Query 1104 AGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACT 1177
.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.||||
Sbjct 891 CGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACT 964
Query 1178 CGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGG-------------------- 1231
|.||.|||||.|||||.|||||.||.||.||||||||.|||.||||||||||||
Sbjct 965 CACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGAAAAGCTGCTTTACTGAGT 1038
Query 1232 ------GTTTG------------------------------------------- 1236
|||||
Sbjct 1039 TCTCAAGTTTGGAACTACAGCCATGATTTGGCCACCATTACAGACCTGGGACTT 1092