Nucleotide Global Alignment
Description
- Query:
- TRCN0000488943
- Subject:
- XM_006537607.3
- Aligned Length:
- 2994
- Identities:
- 1696
- Gaps:
- 1128
Alignment
Query 1 ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG 74
||||||.||||||||||||.||||||.|||||||||||.||.||||||||||||||..|||||||||||||.||
Sbjct 1 ATGGTTGTTCAAACTCGGTTCCCTTCGTGGATTATTTTGTGTTACATCTGGCTGCTTGGCTTTGCACACACGGG 74
Query 75 GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT 148
||||||||||||||||||||||||||||.|.|||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct 75 GGAGGCGCAGGCTGCGAAGGAAGTACTATTACTGGACTCGAAAGCACAACAAACAGAATTGGAATGGATTTCCT 148
Query 149 CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC 222
|||||||||.||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||||
Sbjct 149 CTCCACCCAGTGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTACACTCCGATAAGAACATACCAGGTGTGC 222
Query 223 CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT 296
||.|||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 223 CAGGTCATGGAGCCCAACCAGAACAACTGGCTGCGGACTAACTGGATTTCTAAAGGCAACGCACAAAGGATTTT 296
Query 297 TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA 370
|||||||||||||||||||.|||||||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct 297 TGTAGAATTGAAATTCACCTTGAGGGATTGTAATAGTCTTCCCGGAGTCCTGGGAACTTGCAAGGAAACGTTTA 370
Query 371 ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATATAAGAGAAAACCTCTATGTAAAAATAGACACC 444
|||||||||||||||||||||||||.|||||.||||||||||||.||||||||||.|||||.||||||||||||
Sbjct 371 ATTTGTACTATTATGAAACAGACTACGACACCGGCAGGAATATACGAGAAAACCTTTATGTTAAAATAGACACC 444
Query 445 ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA 518
||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 445 ATTGCTGCAGATGAAAGTTTCACACAAGGTGACCTTGGTGAAAGAAAGATGAAGCTGAACACTGAGGTGAGAGA 518
Query 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCATTGGTTTCTG 592
Query 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA 666
||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||.
Sbjct 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTGTTGAGAACTTAGCTGTCTTTCCAGATACAGTGACTGGTTCG 666
Query 667 GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG 740
|||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||.||.|||||..|||||||
Sbjct 667 GAATTTTCCTCCTTAGTCGAGGTCCGTGGGACATGTGTCAGCAGTGCCGAGGAAGAGGCAGAAAATTCCCCCAG 740
Query 741 GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA 814
.|||||.|||||||||||||||||.|||.||||.||||||||||||||.|||||||||||||||||.|||||||
Sbjct 741 AATGCATTGCAGTGCAGAAGGAGAGTGGCTAGTACCCATTGGAAAATGCATCTGCAAAGCAGGCTATCAGCAAA 814
Query 815 AAGGAGACACTTGTGAACCCTGTGGCCGTGGGTTCTACAAGTCTTCCTCTCAAGATCTTCAGTGCTCTCGTTGT 888
||||.||||||||.||||||||||||||..||||||||||.|||||||||||.|||||.|||||.|||||||||
Sbjct 815 AAGGGGACACTTGCGAACCCTGTGGCCGCAGGTTCTACAAATCTTCCTCTCAGGATCTCCAGTGTTCTCGTTGT 888
Query 889 CCAACTCACAGTTTTTCTGATAAAGAAGGCTCCTCCAGATGTGAATGTGAAGATGGGTATTACAGGGCTCCATC 962
|||||.|||||.||.|||||...||||||.||.|||||.||||||||||||||||||||.|||||.|||||.||
Sbjct 889 CCAACCCACAGCTTCTCTGACCGAGAAGGATCATCCAGGTGTGAATGTGAAGATGGGTACTACAGAGCTCCTTC 962
Query 963 TGACCCACCATACGTTGCATGCACAAGGCCTCCATCTGCACCACAGAACCTCATTTTCAACATCAACCAAACCA 1036
|||.||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||.|||||.|
Sbjct 963 TGATCCACCATACGTTGCATGCACGAGGCCTCCCTCTGCACCACAGAACCTTATTTTCAATATCAATCAAACGA 1036
Query 1037 CAGTAAGTTTGGAATGGAGTCCTCCTGCAGACAATGGGGGAAGAAACGATGTGACCTACAGAATATTGTGTAAG 1110
|.|||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||||.||||||||
Sbjct 1037 CTGTAAGTTTGGAATGGAGTCCTCCGGCTGACAACGGGGGAAGAAACGATGTCACCTACAGAATACTGTGTAAG 1110
Query 1111 CGGTGCAGTTGGGAGCAGGGCGAATGTGTTCCCTGTGGGAGTAACATTGGATACATGCCCCAGCAGACTGGATT 1184
||||||||||||||.|||||.||||||||.||.||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1111 CGGTGCAGTTGGGAACAGGGAGAATGTGTGCCATGCGGAAGTAACATTGGATACATGCCCCAGCAGACGGGATT 1184
Query 1185 AGAGGATAACTATGTCACTGTCATGGACCTGCTAGCCCACGCTAATTATACTTTTGAAGTTGAAGCTGTAAATG 1258
||||||||||||||||||||||||||||||.||.|||||.||.|||||.|||||.|||||||||||||||||||
Sbjct 1185 AGAGGATAACTATGTCACTGTCATGGACCTACTTGCCCATGCAAATTACACTTTCGAAGTTGAAGCTGTAAATG 1258
Query 1259 GAGTTTCTGACTTAAGCCGATCCCAGAGGCTCTTTGCTGCTGTCAGTATCACCACTGGTCAAGCAGCTCCCTCG 1332
|||||||.|||||||||.||||||||||||||||.||||||||.||.||||||||.||||||||||||||||||
Sbjct 1259 GAGTTTCGGACTTAAGCAGATCCCAGAGGCTCTTCGCTGCTGTTAGCATCACCACCGGTCAAGCAGCTCCCTCG 1332
Query 1333 CAAGTGAGCGGAGTAATGAAGGAGAGAGTACTGCAGCGGAGTGTCGAGCTTTCCTGGCAGGAACCAGAGCATCC 1406
||||||||.|||||.|||||||||.|||||||||||||||||||..||||||||||||||||.||.||||||||
Sbjct 1333 CAAGTGAGTGGAGTCATGAAGGAGCGAGTACTGCAGCGGAGTGTGCAGCTTTCCTGGCAGGAGCCGGAGCATCC 1406
Query 1407 CAATGGAGTCATCACAGAATATGAAATCAAGTATTACGAGAAAGATCAAAGGGAACGGACCTACTCAACAGTAA 1480
|||||||||||||||.||||||||||||||||||||.||||||||||||.|||||.||||.|||||||||.|.|
Sbjct 1407 CAATGGAGTCATCACGGAATATGAAATCAAGTATTATGAGAAAGATCAACGGGAAAGGACGTACTCAACACTCA 1480
Query 1481 AAACCAAGTCTACTTCAGCCTCCATTAATAATCTGAAACCAGGAACAGTGTATGTTTTCCAGATTCGGGCTTTT 1554
||||||||||.||.||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.|||||..|.
Sbjct 1481 AAACCAAGTCCACCTCCGCCTCCATTAATAATCTGAAACCGGGAACAGTGTACGTCTTTCAGATCCGGGCGGTC 1554
Query 1555 ACTGCTGCTGGTTATGGAAATTACAGTCCCAGACTTGATGTTGCTACACTAGAGGAAGCTACAGGTAAAATGTT 1628
||||||||.|||||||||||.|||||.||.||.|||||||||||.|||||.|||||||||.|||||||||||||
Sbjct 1555 ACTGCTGCCGGTTATGGAAACTACAGCCCTAGGCTTGATGTTGCCACACTTGAGGAAGCTTCAGGTAAAATGTT 1628
Query 1629 TGAAGCTACAGCTGTCTCCAGTGAACAGAATCCTGTTATTATCATTGCTGTGGTTGCTGTAGCTGGGACCATCA 1702
||||||.|||||.|||||||||||||||||||||||.||.||.||||||||.||.||||||||.||||||||||
Sbjct 1629 TGAAGCGACAGCAGTCTCCAGTGAACAGAATCCTGTCATCATAATTGCTGTAGTGGCTGTAGCAGGGACCATCA 1702
Query 1703 TTTTGGTGTTCATGGTCTTTGGCTTCATCATTGGGAGAAGGCACTGTGGTTATAGCAAAGCTGACCAAGAAGGC 1776
|.||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||.
Sbjct 1703 TCTTGGTGTTCATGGTGTTCGGCTTCATCATTGGAAGAAGGCACTGTGGTTATAGCAAGGCTGACCAAGAAGGG 1776
Query 1777 GATGAAGAGCTTTACTTTCATTGCACCAAAACCTACATTGACCCTGAAACCTATGAGGACCC--------AAAT 1842
||||||||.||.|||||||||| || .||.||...|||| |.|||..| |||.
Sbjct 1777 GATGAAGAACTCTACTTTCATT----------CT--CTTTACAGGGAAA-----GGGGAGACGGGATGGAAAAG 1833
Query 1843 AGAGCTGTCCATCAATTCGCCAAGGAGCTAGATGCCTCCTGTATTAAAATTGAGCGTGTGATTG----GTGCAG 1912
|.| ||.|| ||| |||.| ||.|..|||||| ||||
Sbjct 1834 ACA------CAGCA------CAA---------------------TAAGA---AGTGGATGATTGCATCGTGC-- 1869
Query 1913 GAGAATTCGGTGAAGTCTGCAGTGGCCGTTTGAAACTTCCAGGGAAAAGAGATGTTGCAGTAGCCATAAAAACC 1986
||| ||||||
Sbjct 1870 ---------------TCT--------CGTTTG------------------------------------------ 1878
Query 1987 CTGAAAGTTGGTTACACAGAAAAACAAAGGAGAGACTTTTTGTGTGAAGCAAGCATCATGGGGCAGTTTGACCA 2060
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2061 CCCAAATGTTGTCCATTTGGAAGGGGTTGTTACAAGAGGGAAACCAGTCATGATAGTAATAGAGTTCATGGAAA 2134
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2135 ATGGAGCCCTAGATGCATTTCTCAGGAAACATGATGGGCAATTTACAGTCATTCAGTTAGTAGGAATGCTGAGA 2208
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2209 GGAATTGCTGCTGGAATGAGATATTTGGCTGATATGGGATATGTTCACAGGGACCTTGCAGCTCGCAATATTCT 2282
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2283 TGTCAACAGCAATCTCGTTTGTAAAGTGTCAGATTTTGGCCTGTCCCGAGTTATAGAGGATGATCCAGAAGCTG 2356
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2357 TCTATACAACTACTGGTGGAAAAATTCCAGTAAGGTGGACAGCACCCGAAGCCATCCAGTACCGGAAATTCACA 2430
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2431 TCAGCCAGTGATGTATGGAGCTATGGAATAGTCATGTGGGAAGTTATGTCTTATGGAGAAAGACCTTATTGGGA 2504
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2505 CATGTCAAATCAAGATGTTATAAAAGCAATAGAAGAAGGTTATCGTTTACCAGCACCCATGGACTGCCCAGCTG 2578
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2579 GCCTTCACCAGCTAATGTTGGATTGTTGGCAAAAGGAGCGTGCTGAAAGGCCAAAATTTGAACAGATAGTTGGA 2652
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2653 ATTCTAGACAAAATGATTCGAAACCCAAATAGTCTGAAAACTCCCCTGGGAACTTGTAGTAGGCCAATAAGCCC 2726
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2727 TCTTCTGGATTAAAACACTCCTGATTTCACTACCTTTTGTTCAGTTGGAGAATGGCTACAAGCTATTAAGATGG 2800
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2801 AAAGATATAAAGATAATTTCACGGCAGCTGGCTACAATTCCCTTGAATCAGTAGCCAGGATGACTATTGAGGAT 2874
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2875 GTGATGAGTTTAGGGATCACACTGGTTGGTCATCAAAAGAAAATCATGAGCAGCATTCAGACTATGAGAGCACA 2948
Sbjct 1879 -------------------------------------------------------------------------- 1878
Query 2949 AATGCTACATTTACATGGAACTGGCATTCAAGTG 2982
Sbjct 1879 ---------------------------------- 1878
