Nucleotide Global Alignment

Description

Query:
TRCN0000488943
Subject:
XM_006537607.3
Aligned Length:
2994
Identities:
1696
Gaps:
1128

Alignment

Query    1  ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG  74
            ||||||.||||||||||||.||||||.|||||||||||.||.||||||||||||||..|||||||||||||.||
Sbjct    1  ATGGTTGTTCAAACTCGGTTCCCTTCGTGGATTATTTTGTGTTACATCTGGCTGCTTGGCTTTGCACACACGGG  74

Query   75  GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT  148
            ||||||||||||||||||||||||||||.|.|||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct   75  GGAGGCGCAGGCTGCGAAGGAAGTACTATTACTGGACTCGAAAGCACAACAAACAGAATTGGAATGGATTTCCT  148

Query  149  CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC  222
            |||||||||.||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||||
Sbjct  149  CTCCACCCAGTGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTACACTCCGATAAGAACATACCAGGTGTGC  222

Query  223  CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT  296
            ||.|||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct  223  CAGGTCATGGAGCCCAACCAGAACAACTGGCTGCGGACTAACTGGATTTCTAAAGGCAACGCACAAAGGATTTT  296

Query  297  TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA  370
            |||||||||||||||||||.|||||||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct  297  TGTAGAATTGAAATTCACCTTGAGGGATTGTAATAGTCTTCCCGGAGTCCTGGGAACTTGCAAGGAAACGTTTA  370

Query  371  ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATATAAGAGAAAACCTCTATGTAAAAATAGACACC  444
            |||||||||||||||||||||||||.|||||.||||||||||||.||||||||||.|||||.||||||||||||
Sbjct  371  ATTTGTACTATTATGAAACAGACTACGACACCGGCAGGAATATACGAGAAAACCTTTATGTTAAAATAGACACC  444

Query  445  ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA  518
            ||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  445  ATTGCTGCAGATGAAAGTTTCACACAAGGTGACCTTGGTGAAAGAAAGATGAAGCTGAACACTGAGGTGAGAGA  518

Query  519  GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG  592
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  519  GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCATTGGTTTCTG  592

Query  593  TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA  666
            ||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||.
Sbjct  593  TCAAAGTGTACTACAAGAAGTGCTGGTCCATTGTTGAGAACTTAGCTGTCTTTCCAGATACAGTGACTGGTTCG  666

Query  667  GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG  740
            |||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||.||.|||||..|||||||
Sbjct  667  GAATTTTCCTCCTTAGTCGAGGTCCGTGGGACATGTGTCAGCAGTGCCGAGGAAGAGGCAGAAAATTCCCCCAG  740

Query  741  GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA  814
            .|||||.|||||||||||||||||.|||.||||.||||||||||||||.|||||||||||||||||.|||||||
Sbjct  741  AATGCATTGCAGTGCAGAAGGAGAGTGGCTAGTACCCATTGGAAAATGCATCTGCAAAGCAGGCTATCAGCAAA  814

Query  815  AAGGAGACACTTGTGAACCCTGTGGCCGTGGGTTCTACAAGTCTTCCTCTCAAGATCTTCAGTGCTCTCGTTGT  888
            ||||.||||||||.||||||||||||||..||||||||||.|||||||||||.|||||.|||||.|||||||||
Sbjct  815  AAGGGGACACTTGCGAACCCTGTGGCCGCAGGTTCTACAAATCTTCCTCTCAGGATCTCCAGTGTTCTCGTTGT  888

Query  889  CCAACTCACAGTTTTTCTGATAAAGAAGGCTCCTCCAGATGTGAATGTGAAGATGGGTATTACAGGGCTCCATC  962
            |||||.|||||.||.|||||...||||||.||.|||||.||||||||||||||||||||.|||||.|||||.||
Sbjct  889  CCAACCCACAGCTTCTCTGACCGAGAAGGATCATCCAGGTGTGAATGTGAAGATGGGTACTACAGAGCTCCTTC  962

Query  963  TGACCCACCATACGTTGCATGCACAAGGCCTCCATCTGCACCACAGAACCTCATTTTCAACATCAACCAAACCA  1036
            |||.||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||.|||||.|
Sbjct  963  TGATCCACCATACGTTGCATGCACGAGGCCTCCCTCTGCACCACAGAACCTTATTTTCAATATCAATCAAACGA  1036

Query 1037  CAGTAAGTTTGGAATGGAGTCCTCCTGCAGACAATGGGGGAAGAAACGATGTGACCTACAGAATATTGTGTAAG  1110
            |.|||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||||.||||||||
Sbjct 1037  CTGTAAGTTTGGAATGGAGTCCTCCGGCTGACAACGGGGGAAGAAACGATGTCACCTACAGAATACTGTGTAAG  1110

Query 1111  CGGTGCAGTTGGGAGCAGGGCGAATGTGTTCCCTGTGGGAGTAACATTGGATACATGCCCCAGCAGACTGGATT  1184
            ||||||||||||||.|||||.||||||||.||.||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1111  CGGTGCAGTTGGGAACAGGGAGAATGTGTGCCATGCGGAAGTAACATTGGATACATGCCCCAGCAGACGGGATT  1184

Query 1185  AGAGGATAACTATGTCACTGTCATGGACCTGCTAGCCCACGCTAATTATACTTTTGAAGTTGAAGCTGTAAATG  1258
            ||||||||||||||||||||||||||||||.||.|||||.||.|||||.|||||.|||||||||||||||||||
Sbjct 1185  AGAGGATAACTATGTCACTGTCATGGACCTACTTGCCCATGCAAATTACACTTTCGAAGTTGAAGCTGTAAATG  1258

Query 1259  GAGTTTCTGACTTAAGCCGATCCCAGAGGCTCTTTGCTGCTGTCAGTATCACCACTGGTCAAGCAGCTCCCTCG  1332
            |||||||.|||||||||.||||||||||||||||.||||||||.||.||||||||.||||||||||||||||||
Sbjct 1259  GAGTTTCGGACTTAAGCAGATCCCAGAGGCTCTTCGCTGCTGTTAGCATCACCACCGGTCAAGCAGCTCCCTCG  1332

Query 1333  CAAGTGAGCGGAGTAATGAAGGAGAGAGTACTGCAGCGGAGTGTCGAGCTTTCCTGGCAGGAACCAGAGCATCC  1406
            ||||||||.|||||.|||||||||.|||||||||||||||||||..||||||||||||||||.||.||||||||
Sbjct 1333  CAAGTGAGTGGAGTCATGAAGGAGCGAGTACTGCAGCGGAGTGTGCAGCTTTCCTGGCAGGAGCCGGAGCATCC  1406

Query 1407  CAATGGAGTCATCACAGAATATGAAATCAAGTATTACGAGAAAGATCAAAGGGAACGGACCTACTCAACAGTAA  1480
            |||||||||||||||.||||||||||||||||||||.||||||||||||.|||||.||||.|||||||||.|.|
Sbjct 1407  CAATGGAGTCATCACGGAATATGAAATCAAGTATTATGAGAAAGATCAACGGGAAAGGACGTACTCAACACTCA  1480

Query 1481  AAACCAAGTCTACTTCAGCCTCCATTAATAATCTGAAACCAGGAACAGTGTATGTTTTCCAGATTCGGGCTTTT  1554
            ||||||||||.||.||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.|||||..|.
Sbjct 1481  AAACCAAGTCCACCTCCGCCTCCATTAATAATCTGAAACCGGGAACAGTGTACGTCTTTCAGATCCGGGCGGTC  1554

Query 1555  ACTGCTGCTGGTTATGGAAATTACAGTCCCAGACTTGATGTTGCTACACTAGAGGAAGCTACAGGTAAAATGTT  1628
            ||||||||.|||||||||||.|||||.||.||.|||||||||||.|||||.|||||||||.|||||||||||||
Sbjct 1555  ACTGCTGCCGGTTATGGAAACTACAGCCCTAGGCTTGATGTTGCCACACTTGAGGAAGCTTCAGGTAAAATGTT  1628

Query 1629  TGAAGCTACAGCTGTCTCCAGTGAACAGAATCCTGTTATTATCATTGCTGTGGTTGCTGTAGCTGGGACCATCA  1702
            ||||||.|||||.|||||||||||||||||||||||.||.||.||||||||.||.||||||||.||||||||||
Sbjct 1629  TGAAGCGACAGCAGTCTCCAGTGAACAGAATCCTGTCATCATAATTGCTGTAGTGGCTGTAGCAGGGACCATCA  1702

Query 1703  TTTTGGTGTTCATGGTCTTTGGCTTCATCATTGGGAGAAGGCACTGTGGTTATAGCAAAGCTGACCAAGAAGGC  1776
            |.||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||.
Sbjct 1703  TCTTGGTGTTCATGGTGTTCGGCTTCATCATTGGAAGAAGGCACTGTGGTTATAGCAAGGCTGACCAAGAAGGG  1776

Query 1777  GATGAAGAGCTTTACTTTCATTGCACCAAAACCTACATTGACCCTGAAACCTATGAGGACCC--------AAAT  1842
            ||||||||.||.||||||||||          ||  .||.||...||||     |.|||..|        |||.
Sbjct 1777  GATGAAGAACTCTACTTTCATT----------CT--CTTTACAGGGAAA-----GGGGAGACGGGATGGAAAAG  1833

Query 1843  AGAGCTGTCCATCAATTCGCCAAGGAGCTAGATGCCTCCTGTATTAAAATTGAGCGTGTGATTG----GTGCAG  1912
            |.|      ||.||      |||                     |||.|   ||.|..||||||    ||||  
Sbjct 1834  ACA------CAGCA------CAA---------------------TAAGA---AGTGGATGATTGCATCGTGC--  1869

Query 1913  GAGAATTCGGTGAAGTCTGCAGTGGCCGTTTGAAACTTCCAGGGAAAAGAGATGTTGCAGTAGCCATAAAAACC  1986
                           |||        ||||||                                          
Sbjct 1870  ---------------TCT--------CGTTTG------------------------------------------  1878

Query 1987  CTGAAAGTTGGTTACACAGAAAAACAAAGGAGAGACTTTTTGTGTGAAGCAAGCATCATGGGGCAGTTTGACCA  2060
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2061  CCCAAATGTTGTCCATTTGGAAGGGGTTGTTACAAGAGGGAAACCAGTCATGATAGTAATAGAGTTCATGGAAA  2134
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2135  ATGGAGCCCTAGATGCATTTCTCAGGAAACATGATGGGCAATTTACAGTCATTCAGTTAGTAGGAATGCTGAGA  2208
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2209  GGAATTGCTGCTGGAATGAGATATTTGGCTGATATGGGATATGTTCACAGGGACCTTGCAGCTCGCAATATTCT  2282
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2283  TGTCAACAGCAATCTCGTTTGTAAAGTGTCAGATTTTGGCCTGTCCCGAGTTATAGAGGATGATCCAGAAGCTG  2356
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2357  TCTATACAACTACTGGTGGAAAAATTCCAGTAAGGTGGACAGCACCCGAAGCCATCCAGTACCGGAAATTCACA  2430
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2431  TCAGCCAGTGATGTATGGAGCTATGGAATAGTCATGTGGGAAGTTATGTCTTATGGAGAAAGACCTTATTGGGA  2504
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2505  CATGTCAAATCAAGATGTTATAAAAGCAATAGAAGAAGGTTATCGTTTACCAGCACCCATGGACTGCCCAGCTG  2578
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2579  GCCTTCACCAGCTAATGTTGGATTGTTGGCAAAAGGAGCGTGCTGAAAGGCCAAAATTTGAACAGATAGTTGGA  2652
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2653  ATTCTAGACAAAATGATTCGAAACCCAAATAGTCTGAAAACTCCCCTGGGAACTTGTAGTAGGCCAATAAGCCC  2726
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2727  TCTTCTGGATTAAAACACTCCTGATTTCACTACCTTTTGTTCAGTTGGAGAATGGCTACAAGCTATTAAGATGG  2800
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2801  AAAGATATAAAGATAATTTCACGGCAGCTGGCTACAATTCCCTTGAATCAGTAGCCAGGATGACTATTGAGGAT  2874
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2875  GTGATGAGTTTAGGGATCACACTGGTTGGTCATCAAAAGAAAATCATGAGCAGCATTCAGACTATGAGAGCACA  2948
                                                                                      
Sbjct 1879  --------------------------------------------------------------------------  1878

Query 2949  AATGCTACATTTACATGGAACTGGCATTCAAGTG  2982
                                              
Sbjct 1879  ----------------------------------  1878

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