Nucleotide Global Alignment

Description

• Query: TRCN0000489050
• Subject: NM_001285456.1
• Aligned Length: 1156
• Identities: 876
• Gaps: 140

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGCTGAAGAAGCAGGCA  148
            |         |||||..|||.||||||||||||.||.||||.||||..||||.|.|||||.|||||||||||||
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGCCGAAGAAGCAGGCA  115

Query  149  TTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGCTCGCATGGTCAGTAAAAGCAAA  222
            |.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.||||||||..|||.|      ||||||
Sbjct  116  TCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTCAAGCTCGTGTGGCC------AGCAAA  183

Query  223  GACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAAA------CGAAGATCGCCACACCGCG  290
            |||.||||.||||..||.||.||.|||||||||||.||||||||.||||      ||||||||||||||||.||
Sbjct  184  GACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAAACCGGGGCGAAGATCGCCACACCTCG  257

Query  291  GGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCC-GCTCCA  363
            ||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.|||.||||| || ||.
Sbjct  258  GGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGACCACGCCCAGC-CCT  330

Query  364  AAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGG  437
            |||||.||.||..|.||.||||||||.||||||||.||.||.||.|||||||||||||||||||||||.||.||
Sbjct  331  AAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGCCCCGGCTCTCCCGG  404

Query  438  CACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGG  511
            .||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||||
Sbjct  405  AACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAAGAAGGTGGCAGTGG  478

Query  512  TCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTG  585
            ||||.|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.|||||||||||||||||.
Sbjct  479  TCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGCCCATGCCAGACCTA  552

Query  586  AAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCAGATAAT  659
            ||||||||||.|||.|||||.|||||.|||||||||||||||||||||||.|||||.||.|||           
Sbjct  553  AAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAGCCAGGAGGTGGCAAG-----------  615

Query  660  TAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCTCGGGAG  733
                                                                                      
Sbjct  616  --------------------------------------------------------------------------  615

Query  734  GCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAAC  807
                    |||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||.|||
Sbjct  616  --------GTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGGCTCGTTAGGGAAC  681

Query  808  ATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTC  881
            ||||||||.||.|||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||
Sbjct  682  ATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGGACAGAGTCCAGTC  755

Query  882  GAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGA  955
            |||||||||.|||.||||.||||||||||||||||||||.|||||.|||||.||||||||||||||||||||||
Sbjct  756  GAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAAACCCACAAGCTGA  829

Query  956  CCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGG  1029
            |||||.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||.||||||||||||
Sbjct  830  CCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACCCGTGGTGTCTGGG  903

Query 1030  GACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCAGCTCGC  1103
            |||||.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.|||||.||.|||||.||
Sbjct  904  GACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACTCACCACAGCTTGC  977

Query 1104  CACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG  1149
            |||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct  978  CACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG  1023