Nucleotide Global Alignment

Description

Query:
TRCN0000489177
Subject:
NM_001346640.1
Aligned Length:
2766
Identities:
2535
Gaps:
0

Alignment

Query    1  ATGGTCCAGCTGAGGAAGCTGCTCCGCGTCCTGACTTTGATGAAGTTCCCCTGCTGCGTGCTGGAGGTGCTCCT  74
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGTCCAGCTGGGGAAGCTGCTCCGCGTCCTGACTTTGATGAAGTTCCCCTGCTGCGTGCTGGAGGTGCTCCT  74

Query   75  GTGCGCGCTGGCGGCGGCGGCGCGCGGCCAGGAGATGTACGCCCCGCACTCAATCCGGATCGAGGGGGACGTCA  148
            |||||.|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct   75  GTGCGTGCTGGCGGCGGCGGCGCGCGGCCAGGAGATGTACGCCCCGCACTCGATCCGGATCGAGGGGGACGTCA  148

Query  149  CCCTCGGGGGGCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCGGCGACATCAAGAGGGAAAAC  222
            ||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  149  CCCTTGGGGGGCTGTTCCCAGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCGGCGACATCAAGAGGGAGAAT  222

Query  223  GGGATCCACAGGCTGGAAGCGATGCTCTACGCCCTGGACCAGATCAACAGTGATCCCAACCTACTGCCCAACGT  296
            ||||||||||||||||||||.|||||.||.||.||.||||||||||||||.|||||||||||.|||||||||||
Sbjct  223  GGGATCCACAGGCTGGAAGCTATGCTTTATGCTCTCGACCAGATCAACAGCGATCCCAACCTGCTGCCCAACGT  296

Query  297  GACGCTGGGCGCGCGGATCCTGGACACTTGTTCCAGGGACACTTACGCGCTCGAACAGTCGCTTACTTTCGTCC  370
            .|||.|.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct  297  AACGTTAGGCGCGCGGATCCTGGACACTTGTTCCAGGGACACTTATGCGCTCGAACAGTCGCTCACTTTCGTCC  370

Query  371  AGGCGCTCATCCAGAAGGACACCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGTTTTCGTCAAGCCGGAG  444
            |||||||.||||||||||||||||||||||||||.|||||||||||.||.||.|||||||||||||||||.|||
Sbjct  371  AGGCGCTTATCCAGAAGGACACCTCCGACGTGCGTTGCACCAACGGAGAGCCCCCGGTTTTCGTCAAGCCAGAG  444

Query  445  AAAGTAGTTGGAGTGATTGGGGCTTCGGGGAGTTCGGTCTCCATCATGGTAGCCAACATCCTGAGGCTCTTCCA  518
            ||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||.|||||||.|||||
Sbjct  445  AAAGTAGTTGGAGTGATTGGGGCTTCGGGGAGCTCCGTCTCCATCATGGTAGCCAACATCTTGAGGCTTTTCCA  518

Query  519  GATCCCCCAGATTAGTTATGCATCAACGGCACCCGAGCTAAGTGATGACCGGCGCTATGACTTCTTCTCTCGCG  592
            |||.||.|||||||||||||||||.|||||.||.||.||.|||||||||||.||||||||||||||||||||||
Sbjct  519  GATACCTCAGATTAGTTATGCATCCACGGCTCCTGAACTCAGTGATGACCGTCGCTATGACTTCTTCTCTCGCG  592

Query  593  TGGTGCCACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAAAGGCCCTAGGCTGGAATTATGTGTCT  666
            ||||.|||||.|||||||||||||||||.||.||||||||||||||||||||..|.||||||||||||||.|||
Sbjct  593  TGGTCCCACCTGATTCCTTCCAAGCCCAAGCTATGGTAGACATTGTAAAGGCATTGGGCTGGAATTATGTATCT  666

Query  667  ACCCTCGCATCGGAAGGAAGTTATGGAGAGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGCAGGTGG  740
            ||.||.|||||.||||||||.|||||||||||||||||||||||||||||.||.|||||||||||.||||||||
Sbjct  667  ACTCTTGCATCTGAAGGAAGCTATGGAGAGAAAGGTGTGGAGTCCTTCACACAAATTTCCAAAGAAGCAGGTGG  740

Query  741  ACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCA  814
            |||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACTCTGCATTGCCCAGTCCGTGAGAATTCCCCAAGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCA  814

Query  815  AACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTTTTGCCAACGATGAGGATATAAAGCAGATCCTT  888
            ||||||||.||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACAGCTCTTGGACACCCCCAACTCCAGGGCTGTCGTGATTTTTGCCAACGATGAGGATATAAAGCAGATCCTT  888

Query  889  GCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCCAAAATAAA  962
            ||||||||||||||||||||||||||.||.||||||||.|||||.||.||||||||||||||.||||||||.||
Sbjct  889  GCAGCAGCCAAAAGAGCTGACCAAGTAGGACATTTTCTCTGGGTTGGGTCAGACAGCTGGGGTTCCAAAATCAA  962

Query  963  CCCACTGCACCAGCATGAAGATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCACGGTGGAAGGGT  1036
            |||||||||.||||||||||||||.||||||||.|||||||||||.||.||.|||.||||.||.||||||||.|
Sbjct  963  CCCACTGCATCAGCATGAAGATATTGCAGAAGGAGCCATCACCATCCAACCTAAGAGAGCGACTGTGGAAGGAT  1036

Query 1037  TTGATGCCTACTTTACGTCCCGTACACTTGAAAACAACAGAAGAAATGTATGGTTTGCCGAATACTGGGAGGAA  1110
            |||||||.|||||.||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1037  TTGATGCTTACTTCACATCCCGGACACTTGAAAACAACAGGAGAAATGTATGGTTTGCCGAATACTGGGAAGAA  1110

Query 1111  AACTTCAACTGCAAGTTGACGATTAGTGGGTCAAAAAAAGAAGACACAGATCGCAAATGCACAGGACAGGAGAG  1184
            ||||||||||||||||||||.||||||||.||.||||||||||||||.||||||||||||||||||||||||.|
Sbjct 1111  AACTTCAACTGCAAGTTGACAATTAGTGGATCCAAAAAAGAAGACACGGATCGCAAATGCACAGGACAGGAGCG  1184

Query 1185  AATTGGAAAAGATTCCAACTATGAGCAGGAGGGTAAAGTCCAGTTCGTGATTGACGCAGTCTATGCTATGGCTC  1258
            ||||||||||||.||.||.||||||||||||||||||||.|||||.|||||.||.||.||||||||.|||||.|
Sbjct 1185  AATTGGAAAAGACTCTAATTATGAGCAGGAGGGTAAAGTACAGTTTGTGATCGATGCTGTCTATGCCATGGCAC  1258

Query 1259  ACGCCCTTCACCACATGAACAAGGATCTCTGTGCTGACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCTGGA  1332
            |.||||||||.||||||||.||||||||.|||||||||||||||||.||.||||||||.|||||||||||.||.
Sbjct 1259  ATGCCCTTCATCACATGAATAAGGATCTGTGTGCTGACTACCGGGGAGTGTGCCCAGAAATGGAGCAAGCAGGG  1332

Query 1333  GGCAAGAAGTTGCTGAAGTATATACGCAATGTTAATTTCAATGGTAGTGCTGGCACTCCAGTGATGTTTAACAA  1406
            ||||||||||||.||||||||||.|||||||||||.|||||||||||||||||.||.|||||||||||||||||
Sbjct 1333  GGCAAGAAGTTGTTGAAGTATATCCGCAATGTTAACTTCAATGGTAGTGCTGGAACCCCAGTGATGTTTAACAA  1406

Query 1407  GAACGGGGATGCACCTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTC  1480
            .||.||.|||||.||.||.||.|||||||||||.|||||||||||.||||||||.|.|||.||.|||||.||||
Sbjct 1407  AAATGGTGATGCTCCAGGACGATATGACATCTTCCAGTACCAGACAACAAACACTACCAATCCTGGTTATCGTC  1480

Query 1481  TGATCGGGCAGTGGACAGACGAACTTCAGCTCAATATAGAAGACATGCAGTGGGGTAAAGGAGTCCGAGAGATA  1554
            |.||.||||||||||||||.|||||.||||||||||||||.||||||||||||||.|||||||||||.|||||.
Sbjct 1481  TCATTGGGCAGTGGACAGATGAACTGCAGCTCAATATAGAGGACATGCAGTGGGGCAAAGGAGTCCGGGAGATC  1554

Query 1555  CCCGCCTCAGTGTGCACACTACCATGTAAGCCAGGACAGAGAAAGAAGACACAGAAAGGAACTCCTTGCTGTTG  1628
            ||..||||.|||||||||.|.|||||.|||||.||.|||||.||||||||||||||.|||||.||||||||.||
Sbjct 1555  CCACCCTCTGTGTGCACATTGCCATGCAAGCCTGGGCAGAGGAAGAAGACACAGAAGGGAACCCCTTGCTGCTG  1628

Query 1629  GACCTGTGAGCCTTGCGATGGTTACCAGTACCAGTTTGATGAGATGACATGCCAGCATTGCCCCTATGACCAGA  1702
            |||.||||||||.||.|||||.||||||||.||.|||||||||||||||||.||||||||.|||||||||||||
Sbjct 1629  GACTTGTGAGCCCTGTGATGGATACCAGTATCAATTTGATGAGATGACATGTCAGCATTGTCCCTATGACCAGA  1702

Query 1703  GGCCCAATGAAAATCGAACCGGATGCCAGGATATTCCCATCATCAAACTGGAGTGGCACTCCCCCTGGGCTGTG  1776
            ||||||||||.||.|||||.||.||.|||.|.||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1703  GGCCCAATGAGAACCGAACTGGCTGTCAGAACATCCCAATCATCAAACTGGAGTGGCACTCCCCCTGGGCTGTA  1776

Query 1777  ATTCCTGTCTTCCTGGCAATGTTGGGGATCATTGCCACCATCTTTGTCATGGCCACTTTCATCCGCTACAATGA  1850
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 1777  ATTCCTGTCTTCCTGGCAATGTTGGGGATCATTGCCACCATCTTTGTCATGGCAACCTTCATCCGCTACAATGA  1850

Query 1851  CACGCCCATTGTCCGGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACATCA  1924
            .||.|||||.|||.|||||||||||||||||||||||||||||.|.|||||.|||||||||||.|||||.||||
Sbjct 1851  TACACCCATCGTCAGGGCATCTGGGCGGGAACTCAGCTATGTTTTATTGACAGGCATCTTTCTCTGCTATATCA  1924

Query 1925  TCACTTTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGGCGAGTTTTCTTGGGCTTGGGTATG  1998
            ||||.|||||.|||||||||||.||||||||||||||||||||.|||||.||.||.||||||||.|||||||||
Sbjct 1925  TCACCTTCCTAATGATTGCCAAGCCAGATGTGGCAGTGTGTTCCTTCCGACGTGTCTTCTTGGGGTTGGGTATG  1998

Query 1999  TGCATCAGTTATGCAGCCCTCTTGACGAAAACAAATCGGATTTATCGCATATTTGAGCAGGGCAAGAAATCAGT  2072
            ||.||.||||||||||||||.||.||.|||||.||||||||||||||||||||.|||||||||||||||||.||
Sbjct 1999  TGTATTAGTTATGCAGCCCTTTTAACAAAAACCAATCGGATTTATCGCATATTCGAGCAGGGCAAGAAATCGGT  2072

Query 2073  AACAGCTCCCAGACTCATAAGCCCAACATCACAACTGGCAATCACTTCCAGTTTAATATCAGTTCAGCTTCTAG  2146
            .|||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||.||.|||||||
Sbjct 2073  GACAGCTCCCAGACTCATAAGCCCAACATCACAACTGGCAATTACCTCCAGTTTAATATCGGTGCAACTTCTAG  2146

Query 2147  GGGTGTTCATTTGGTTTGGTGTTGATCCACCCAACATCATCATAGACTATGATGAACACAAGACAATGAACCCT  2220
            |.||.||.|||||||||||.|||||.|||||||||||||||||||||||.|||||.||.||||||||||||||.
Sbjct 2147  GTGTCTTTATTTGGTTTGGGGTTGACCCACCCAACATCATCATAGACTACGATGAGCATAAGACAATGAACCCA  2220

Query 2221  GAGCAAGCCAGAGGGGTTCTCAAGTGTGACATTACAGATCTCCAAATCATTTGCTCCTTGGGATATAGCATTCT  2294
            ||.||||||||.||.||||||||.||||||||.|||||.||.||.||||||||.||.|||||||||||||||||
Sbjct 2221  GAACAAGCCAGGGGAGTTCTCAAATGTGACATCACAGACCTTCAGATCATTTGTTCTTTGGGATATAGCATTCT  2294

Query 2295  TCTCATGGTCACATGTACTGTGTATGCCATCAAGACTCGGGGTGTACCCGAGAATTTTAACGAAGCCAAGCCCA  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 2295  TCTCATGGTCACATGTACTGTGTATGCCATCAAGACTCGGGGTGTACCAGAGAATTTTAATGAAGCCAAGCCCA  2368

Query 2369  TTGGATTCACTATGTACACGACATGTATAGTATGGCTTGCCTTCATTCCAATTTTTTTTGGCACCGCTCAATCA  2442
            ||||||||||||||||||||||.|||||.|||||||||||||||||.|||||.|||||||||||.||.||||||
Sbjct 2369  TTGGATTCACTATGTACACGACTTGTATCGTATGGCTTGCCTTCATCCCAATATTTTTTGGCACAGCGCAATCA  2442

Query 2443  GCGGAAAAGCTCTACATACAAACTACCACGCTTACAATCTCCATGAACCTAAGTGCATCAGTGGCGCTGGGGAT  2516
            ||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GCAGAAAAGCTCTACATACAAACCACCACGCTTACAATCTCCATGAACCTAAGTGCATCAGTGGCGCTGGGGAT  2516

Query 2517  GCTATACATGCCGAAAGTGTACATCATCATTTTCCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAGCTTCA  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  GCTATACATGCCGAAAGTGTACATCATCATTTTCCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAGCTTCA  2590

Query 2591  AGGCGGTAGTCACAGCAGCCACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCA  2664
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 2591  AGGCCGTAGTCACAGCAGCCACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGGCCCAATGGTGAGGCA  2664

Query 2665  AAGACCGAGCTCTGTGAAAACGTAGACCCAAACAACTGTATACCACCAGTAAGAAAGAGTGTACAAAAGTCTGT  2738
            |||||.||.||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 2665  AAGACAGAACTTTGTGAAAATGTAGACCCAAACAACTGTATACCACCAGTAAGAAAGAGTGTACAAAAGTCCGT  2738

Query 2739  TACTTGGTACACTATCCCACCAACAGTA  2766
            .|||||||||||||||||||||||||||
Sbjct 2739  AACTTGGTACACTATCCCACCAACAGTA  2766

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