Nucleotide Global Alignment

Description

Query:
TRCN0000489298
Subject:
NM_001316313.2
Aligned Length:
2941
Identities:
2675
Gaps:
265

Alignment

Query    1  ATGGCGCTGGCTGTCTTGCGGGTCCTGGAGCCCTTTCCGACCGAGACACCCCCGTTGGCAGTGCTGCTGCCACC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGCTGGCTGTCTTGCGGGTCCTGGAGCCCTTTCCGACCGAGACACCCCCGTTGGCAGTGCTGCTGCCACC  74

Query   75  CGGGGGCCCGTGGCCGGCGGCGGAGCTGGGCCTGGTGCTGGCCCTGAGGCCTGCAGGGGAGAGCCCGGCAGGGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGGGGCCCGTGGCCGGCGGCGGAGCTGGGCCTGGTGCTGGCCCTGAGGCCTGCAGGGGAGAGCCCGGCAGGGC  148

Query  149  CGGCGCTGCTGGTGGCAGCCCTGGAGGGGCCGGACGCGGGCACCGAAGAGCAGGGTCCCGGGCCGCCGCAGCTA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGGCGCTGCTGGTGGCAGCCCTGGAGGGGCCGGACGCGGGCACCGAAGAGCAGGGTCCCGGGCCGCCGCAGCTA  222

Query  223  CTGGTTAGCCGCGCGCTGCTGCGGCTCCTGGCACTGGGCTCCGGGGCCTGGGTGCGGGCGCGGGCGGTGCGGCG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGGTTAGCCGCGCGCTGCTGCGGCTCCTGGCACTGGGCTCCGGGGCCTGGGTGCGGGCGCGGGCGGTGCGGCG  296

Query  297  GCCCCCGGCGCTAGGTTGGGCACTGCTTGGCACCTCGCTGGGGCCTGGGCTCGGACCGCGAGTCGGGCCGCTGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCCCCGGCGCTAGGTTGGGCACTGCTTGGCACCTCGCTGGGGCCTGGGCTCGGACCGCGAGTCGGGCCGCTGC  370

Query  371  TGGTGAGGCGCGGAGAGACCCTCCCAGTGCCCGGACCGCGGGTGCTGGAGACGCGGCCGGCGTTGCAAGGGCTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGTGAGGCGCGGAGAGACCCTCCCAGTGCCCGGACCGCGGGTGCTGGAGACGCGGCCGGCGTTGCAAGGGCTG  444

Query  445  CTGGGCCCAGGGACTCGGCTGGCTGTGACTGAGCTCCGCGGGCGGGCCAGACTGTGTCCAGAGTCTGGGGACAG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGGGCCCAGGGACTCGGCTGGCTGTGACTGAGCTCCGCGGGCGGGCCAGACTGTGTCCAGAGTCTGGGGACAG  518

Query  519  CAGTCGGCCCCCACCCCCGCCCGTGGTGTCCTCCTTTGCGGTTTCTGGCACAGTGCGGCGACTCCAGGGAGTTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGTCGGCCCCCACCCCCGCCCGTGGTGTCCTCCTTTGCGGTTTCTGGCACAGTGCGGCGACTCCAGGGAGTTC  592

Query  593  TGGGAGGGACTGGAGATTCACTAGGGGTGAGCCGGAGCTGTCTCCGTGGCCTTGGCCTCTTCCAGGGCGAATGG  666
            |||||||||||||||||||||||||                                                 
Sbjct  593  TGGGAGGGACTGGAGATTCACTAGG-------------------------------------------------  617

Query  667  GTGTGGGTGGCCCAGGCCAGAGAGTCATCGAACACTTCACAGCCGCACTTGGCTAGGGTGCAGGTCCTAGAACC  740
                                                                                      
Sbjct  618  --------------------------------------------------------------------------  617

Query  741  TCGCTGGGACCTCTCTGATAGACTGGGACCCGGCTCTGGACCGCTGGGAGAGCCCCTCGCTGACGGACTGGCGC  814
                                                                                      
Sbjct  618  --------------------------------------------------------------------------  617

Query  815  TTGTCCCTGCCACTTTGGCTTTTAATCTTGGCTGTGACCCCCTGGAAATGGGAGAGCTCAGAATTCAGAGGTAC  888
                                                                               |||||||
Sbjct  618  -------------------------------------------------------------------GAGGTAC  624

Query  889  TTGGAAGGCTCCATCGCCCCTGAAGACAAAGGAAGCTGCTCATTGCTGCCTGGGCCTCCATTTGCCAGAGAGTT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  TTGGAAGGCTCCATCGCCCCTGAAGACAAAGGAAGCTGCTCATTGCTGCCTGGGCCTCCATTTGCCAGAGAGTT  698

Query  963  ACACATCGAAATTGTGTCTTCTCCCCACTACAGCACTAATGGAAATTATGACGGTGTTCTTTACCGGCACTTTC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  699  ACACATCGAAATTGTGTCTTCTCCCCACTACAGCACTAATGGAAATTATGACGGTGTTCTTTACCGGCACTTTC  772

Query 1037  AGATACCCAGGGTAGTCCAGGAAGGGGATGTTCTATGTGTGCCAACAATTGGGCAAGTAGAGATCCTGGAAGGA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  773  AGATACCCAGGGTAGTCCAGGAAGGGGATGTTCTATGTGTGCCAACAATTGGGCAAGTAGAGATCCTGGAAGGA  846

Query 1111  AGTCCAGAGAAACTGCCCAGGTGGCGGGAAATGTTTTTTAAAGTGAAGAAAACAGTTGGGGAAGCTCCAGATGG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  847  AGTCCAGAGAAACTGCCCAGGTGGCGGGAAATGTTTTTTAAAGTGAAGAAAACAGTTGGGGAAGCTCCAGATGG  920

Query 1185  ACCAGCCAGTGCCTACTTGGCCGACACCACCCATACCTCCTTGTACATGGTGGGTTCTACCCTGAGCCCTGTTC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  921  ACCAGCCAGTGCCTACTTGGCCGACACCACCCATACCTCCTTGTACATGGTGGGTTCTACCCTGAGCCCTGTTC  994

Query 1259  CATGGCTCCCTTCAGAGGAATCCACTCTCTGGAGCAGTTTGTCTCCTCCAGGCCTGGAGGCCTTGGTGTCTGAA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  995  CATGGCTCCCTTCAGAGGAATCCACTCTCTGGAGCAGTTTGTCTCCTCCAGGCCTGGAGGCCTTGGTGTCTGAA  1068

Query 1333  CTCTGTGCTGTCCTGAAGCCTCGCCTCCAGCCAGGGGGTGCCCTGCTGACAGGAACTAGCAGTGTCCTTCTACG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069  CTCTGTGCTGTCCTGAAGCCTCGCCTCCAGCCAGGGGGTGCCCTGCTGACAGGAACTAGCAGTGTCCTTCTACG  1142

Query 1407  GGGCCCCCCAGGCTGTGGGAAGACCACAGTAGTTGCTGCTGCCTGTAGTCACCTTGGGCTCCACTTACTGAAGG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143  GGGCCCCCCAGGCTGTGGGAAGACCACAGTAGTTGCTGCTGCCTGTAGTCACCTTGGGCTCCACTTACTGAAGG  1216

Query 1481  TGCCCTGCTCCAGCCTCTGTGCAGAAAGTAGTGGGGCTGTGGAGACAAAACTGCAGGCCATCTTCTCCCGGGCC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217  TGCCCTGCTCCAGCCTCTGTGCAGAAAGTAGTGGGGCTGTGGAGACAAAACTGCAGGCCATCTTCTCCCGGGCC  1290

Query 1555  CGCCGTTGCCGGCCTGCAGTCCTGTTGCTCACAGCTGTGGACCTTCTGGGCCGGGACCGTGATGGGCTGGGTGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291  CGCCGTTGCCGGCCTGCAGTCCTGTTGCTCACAGCTGTGGACCTTCTGGGCCGGGACCGTGATGGGCTGGGTGA  1364

Query 1629  GGATGCCCGTGTGATGGCTGTGCTGCGTCACCTCCTCCTCAATGAGGACCCCCTCAACAGCTGCCCTCCCCTCA  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1365  GGATGCCCGTGTGATGGCTGTGCTGCGTCACCTCCTCCTCAATGAGGACCCCCTCAACAGCTGCCCTCCCCTCA  1438

Query 1703  TGGTTGTGGCCACCACAAGCCGGGCCCAGGACCTGCCTGCTGATGTGCAGACAGCATTTCCTCATGAGCTCGAG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439  TGGTTGTGGCCACCACAAGCCGGGCCCAGGACCTGCCTGCTGATGTGCAGACAGCATTTCCTCATGAGCTCGAG  1512

Query 1777  GTGCCTGCTCTGTCAGAGGGGCAGCGGCTCAGCATCCTGCGGGCCCTCACTGCCCACCTTCCCCTGGGCCAGGA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1513  GTGCCTGCTCTGTCAGAGGGGCAGCGGCTCAGCATCCTGCGGGCCCTCACTGCCCACCTTCCCCTGGGCCAGGA  1586

Query 1851  GGTGAACTTGGCACAGCTAGCACGGCGGTGTGCAGGCTTTGTGGTAGGGGATCTCTATGCCCTTCTGACCCACA  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1587  GGTGAACTTGGCACAGCTAGCACGGCGGTGTGCAGGCTTTGTGGTAGGGGATCTCTATGCCCTTCTGACCCACA  1660

Query 1925  GCAGCCGGGCAGCCTGCACCAGGATCAAGAACTCAGGTTTGGCAGGTGGCTTGACTGAGGAGGATGAGGGGGAG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1661  GCAGCCGGGCAGCCTGCACCAGGATCAAGAACTCAGGTTTGGCAGGTGGCTTGACTGAGGAGGATGAGGGGGAG  1734

Query 1999  CTGTGTGCTGCCGGCTTTCCTCTCCTGGCTGAGGACTTTGGGCAGGCACTGGAGCAACTGCAGACAGCTCACTC  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735  CTGTGTGCTGCCGGCTTTCCTCTCCTGGCTGAGGACTTTGGGCAGGCACTGGAGCAACTGCAGACAGCTCACTC  1808

Query 2073  CCAGGCCGTTGGAGCCCCCAAGATCCCCTCAGTGTCCTGGCATGATGTGGGTGGGCTGCAGGAGGTGAAGAAGG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1809  CCAGGCCGTTGGAGCCCCCAAGATCCCCTCAGTGTCCTGGCATGATGTGGGTGGGCTGCAGGAGGTGAAGAAGG  1882

Query 2147  AGATCCTGGAGACCATTCAGCTCCCCCTGGAGCACCCTGAGCTACTGAGCCTGGGCCTGAGACGCTCAGGCCTT  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1883  AGATCCTGGAGACCATTCAGCTCCCCCTGGAGCACCCTGAGCTACTGAGCCTGGGCCTGAGACGCTCAGGCCTT  1956

Query 2221  CTGCTCCATGGGCCCCCTGGCACCGGCAAGACCCTTCTGGCCAAGGCAGTAGCCACTGAGTGCAGCCTTACCTT  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1957  CTGCTCCATGGGCCCCCTGGCACCGGCAAGACCCTTCTGGCCAAGGCAGTAGCCACTGAGTGCAGCCTTACCTT  2030

Query 2295  CCTCAGCGTGAAGGGGCCAGAGCTCATTAACATGTATGTGGGCCAAAGTGAGGAGAATGTGCGGGAAGTATTTG  2368
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 2031  CCTCAGCGTGAAGGGGCCAGAGCTCATTAACATGTATGTGGGCCAAAGTGAGGAGAATGTGCGGGAAGTGTTTG  2104

Query 2369  CCAGGGCCAGGGCTGCAGCTCCATGCATTATCTTCTTTGATGAACTGGACTCTTTGGCCCCAAGCCGGGGGCGA  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2105  CCAGGGCCAGGGCTGCAGCTCCATGCATTATCTTCTTTGATGAACTGGACTCTTTGGCCCCAAGCCGGGGGCGA  2178

Query 2443  AGTGGAGATTCTGGAGGAGTGATGGACAGGGTGGTGTCTCAGCTCCTTGCCGAGCTAGATGGGCTGCACAGCAC  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2179  AGTGGAGATTCTGGAGGAGTGATGGACAGGGTGGTGTCTCAGCTCCTTGCCGAGCTAGATGGGCTGCACAGCAC  2252

Query 2517  TCAGGATGTGTTTGTGATTGGAGCCACCAACAGACCAGATCTCCTGGACCCTGCCCTTCTGCGGCCTGGCAGAT  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2253  TCAGGATGTGTTTGTGATTGGAGCCACCAACAGACCAGATCTCCTGGACCCTGCCCTTCTGCGGCCTGGCAGAT  2326

Query 2591  TTGACAAGCTGGTGTTTGTGGGGGCAAATGAGGACCGGGCCTCCCAGCTACGCGTTCTAAGTGCCATCACACGC  2664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2327  TTGACAAGCTGGTGTTTGTGGGGGCAAATGAGGACCGGGCCTCCCAGCTACGCGTTCTAAGTGCCATCACACGC  2400

Query 2665  AAATTCAAGCTAGAGCCATCTGTGAGCCTGGTAAACGTGCTAGATTGCTGCCCTCCCCAGCTGACGGGCGCGGA  2738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2401  AAATTCAAGCTAGAGCCATCTGTGAGCCTGGTAAACGTGCTAGATTGCTGCCCTCCCCAGCTGACGGGCGCGGA  2474

Query 2739  CCTCTACTCTCTCTGCTCTGATGCTATGACAGCTGCCCTCAAACGCAGGGTTCATGACCTGGAGGAAGGGCTGG  2812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2475  CCTCTACTCTCTCTGCTCTGATGCTATGACAGCTGCCCTCAAACGCAGGGTTCATGACCTGGAGGAAGGGCTGG  2548

Query 2813  AGCCAGGTAGCTCAGCACTGATGCTCACCATGGAGGACTTGCTGCAGGCTGCCGCCCGGCTGCAACCCTCAGTC  2886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2549  AGCCAGGTAGCTCAGCACTGATGCTCACCATGGAGGACTTGCTGCAGGCTGCCGCCCGGCTGCAACCCTCAGTC  2622

Query 2887  AGTGAGCAGGAGCTGCTCCGGTACAAGCGCATCCAGCGCAAGTTTGCTGCCTGCG  2941
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 2623  AGTGAGCAGGAGCTGCTCCGGTACAAGCGCATCCAGCGCAAGTTTGCTGCCTGC-  2676

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