Nucleotide Global Alignment
Description
- Query:
- TRCN0000489417
- Subject:
- XR_001737315.2
- Aligned Length:
- 2288
- Identities:
- 1319
- Gaps:
- 948
Alignment
Query 1 ATGCCCAGCAGGACCGGCCCCAAGATGGAAGGGAGCGGCGGCCGCGTCCGCCTCAAGGCGCATTACGGGGGGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCTTCATCACCAGCGTGGACGCCGCCACGACCTTCGAGGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTGACCCTTGCACGGTGTCCTCCCAGATG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAGCTGGAAGAGGCTTTCCGCCTGGCCCGTCAGTGCAGGGACGAAGGCCTCATCATTCATGTTTTCCCGAGCAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCTGAGCAGCCTGGCCTGCCATGTCCGGGAGAAGACAAATCTATCTACCGCCGGGGAGCCAGAAGATGGAGGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAAGCGCTT------TAACAGGAGAGCGTACTGCGGTCAG 438
|| ||.||||.|||..| |||| |.||||||
Sbjct 1 AG------------AATGGCCCCCTGAT-----------GCTTGGTTACTGACAGGA----------------- 34
Query 439 TGCAGCGAGAGGATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATCAA-----CTGCAAACTGCTGGTCC-- 505
|||||| |.||||.| ||| || ||.|| |.||| .||||||.| .|||
Sbjct 35 TGCAGC-------TTTGGGAC------AGG---GG----AGATG-ACCAAGCATTGTGCAAAAT----ATCCCG 83
Query 506 ----AT-AAGCGCT----------GCCACGGCCT--CGTCCCG-CTGAC---------CTGCAGGAAGCATATG 552
|| ||||.|| |.||.||||| .||.||| .||.| ||||| |||.|||| |
Sbjct 84 TTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGCAGTACCGAGTGGCCACCTCCGTCTGCA-GAATCATA-G 155
Query 553 GATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGAC 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 GATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGAC 229
Query 627 AGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGACAGCATTAAAGACGACTCGGAGGACCTTAAGCCAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 AGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGACAGCATTAAAGACGACTCGGAGGACCTTAAGCCAG 303
Query 701 TTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCAGGACTTTGACCTAATCAGAGTCATC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 TTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCAGGACTTTGACCTAATCAGAGTCATC 377
Query 775 GGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAATTTACGCCATGAAAGTGGT 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 378 GGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAATTTACGCCATGAAAGTGGT 451
Query 849 GAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGGGTACAGACAGAGAAGCACGTGTTTGAGCAGGCAT 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 GAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGGGTACAGACAGAGAAGCACGTGTTTGAGCAGGCAT 525
Query 923 CCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGGTTGTTCCTGGTCATTGAGTAC 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 CCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGGTTGTTCCTGGTCATTGAGTAC 599
Query 997 GTCAACGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGAGGAGCACGCCAGGTTCTACGC 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GTCAACGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGAGGAGCACGCCAGGTTCTACGC 673
Query 1071 GGCCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACAGGGACCTGAAGCTGGACAACG 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 GGCCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACAGGGACCTGAAGCTGGACAACG 747
Query 1145 TCCTCCTGGATGCGGACGGGCACATCAAGCTCACAGACTACGGCATGTGCAAGGAAGGCCTGGGCCCTGGTGAC 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 TCCTCCTGGATGCGGACGGGCACATCAAGCTCACAGACTACGGCATGTGCAAGGAAGGCCTGGGCCCTGGTGAC 821
Query 1219 ACAACGAGCACTTTCTGCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCGGGGAGAGGAGTACGGGTTCAG 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 ACAACGAGCACTTTCTGCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCGGGGAGAGGAGTACGGGTTCAG 895
Query 1293 CGTGGACTGGTGGGCGCTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCTCCCCGTTCGACATCATCACCG 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 CGTGGACTGGTGGGCGCTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCTCCCCGTTCGACATCATCACCG 969
Query 1367 ACAACCCGGACATGAACACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGTTC 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 970 ACAACCCGGACATGAACACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGTTC 1043
Query 1441 CTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCC 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044 CTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCC 1117
Query 1515 ACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTT-------------- 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 ACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGGTGTTTCATACAA 1191
Query 1575 ---------------------------------------------------------------------GCTGG 1579
|||||
Sbjct 1192 AGAATACAAGTAACTGATGAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGG 1265
Query 1580 AGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAG 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 AGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAG 1339
Query 1654 TTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGA 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340 TTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGA 1413
Query 1728 AGGCTTTGAGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGG------------------------ 1777
|||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1414 AGGCTTTGAGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTG 1487
Query 1778 -------------------------------------------------------------------------- 1777
Sbjct 1488 GACACGCGTGATTGACCCTTTAACTGTATCCTTAACCACCGCATATGCATGCCAGGCTGGGCACGGCTCCGAGG 1561
Query 1778 -------------------------------------------------------------------------- 1777
Sbjct 1562 GCGGCCAGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTC 1635
Query 1778 -------------------------------------------------------------------------- 1777
Sbjct 1636 CCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC 1709
Query 1778 -------------------------------------------------------------------------- 1777
Sbjct 1710 GCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACTCGATGCA 1783
Query 1778 -------------------------------------------------------------------- 1777
Sbjct 1784 CTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGTGGAA 1851
