Nucleotide Global Alignment

Description

Query:
TRCN0000489494
Subject:
XR_001785087.1
Aligned Length:
2765
Identities:
1063
Gaps:
1616

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCATGGAAACTGTGCGGGTAGAAACGTGTGAGCGCGAGGGTGGTTGGAGGAGAAGGAACACTCCCCTGGCGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCGGCGCGAGGGTGCTCCTCGGATGACGTCACGCACCCAGGTGACGTCACGACCGTGACATGCGGGTGACGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTGCCGCGGCGACTCCTCGTCGTCTCCGCCCCCTCCCCCCCCCAAATCCCCTCAGGCTCGGCTGCGCCGGGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGCCGGCGGGTTCCAGAGGTGGCCTCCGCCCCGGCCGCTCCGCCCACGCCCCCCGCGCCTCCGCGCCCGCCTCC  296

Query    1  ---------------------------------------------------------------------ATGGC  5
                                                                                 |||||
Sbjct  297  GCCCGCCCTGCGCCTCCCTTCCCCCTCCCCGCCCCGCGGCGGCCGCTCGGCCCGGCTCGCGCTTCGAAGATGGC  370

Query    6  GGCGCTGA------------------------------------------------GCGGTGGCGGT-------  24
            ||||||||                                                |||||||||||       
Sbjct  371  GGCGCTGAGTGGCGGCGGTGGCAGCAGCAGCGGTGGCGGCGGCGGCGGTGGCGGCGGCGGTGGCGGTGGCGACG  444

Query   25  --GGTGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCCCGAGGCCGGCGCCGGCGCCGGC  96
              ||.||||||||.||||.||||||||||||||||||.||.|||||||||||.|||      ||||||||.|||
Sbjct  445  GCGGCGGCGGCGCCGAGCAGGGCCAGGCTCTGTTCAATGGCGACATGGAGCCGGAG------GCCGGCGCTGGC  512

Query   97  GCCGCGGCCTCTTCGGCTGCGGACCCTGCCATTCCGGAGGAGGTGTGGAATATCAAACAAATGATTAAGTTGAC  170
            ||||||||||||||||||||||||||.||||||||.||.|||||.|||||||||||.|||||||||||||||||
Sbjct  513  GCCGCGGCCTCTTCGGCTGCGGACCCGGCCATTCCTGAAGAGGTATGGAATATCAAGCAAATGATTAAGTTGAC  586

Query  171  ACAGGAACATATAGAGGCCCTATTGGACAAATTTGGTGGGGAGCATAATCCACCATCAATATATCTGGAGGCCT  244
            |||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||
Sbjct  587  ACAGGAACATATAGAGGCCCTATTGGACAAATTTGGTGGAGAGCATAACCCACCATCAATATACCTGGAGGCCT  660

Query  245  ATGAAGAATACACCAGCAAGCTAGATGCACTCCAACAAAGAGAACAACAGTTATTGGAATCTCTGGGGAACGGA  318
            |||||||.||||||||||||||||||||.||.||.|||||||||||.|||.|.||||||||.|||||.||.|||
Sbjct  661  ATGAAGAGTACACCAGCAAGCTAGATGCCCTTCAGCAAAGAGAACAGCAGCTTTTGGAATCCCTGGGTAATGGA  734

Query  319  ACTGATTTTTCTGTTTCTAGCTCTGCATCAATGGATACCGTTACATCTTCTTCCTCTTCTAGCCTTTCAGTGCT  392
            .|.||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||||||||||||
Sbjct  735  GCAGATTTTTCTGTTTCTAGCTCTGCATCAATGGACACCGTTACATCCTCCTCCTCTTCTAGCCTTTCAGTGCT  808

Query  393  ACCTTCATCTCTTTCAGTTTTTCAAAATCCCACAGATGTGGCACGGAGCAACCCCAAGTCACCACAAAAACCTA  466
            |||.||||||||||||||||||||||.|||||||||||...||||||.||||||||||||||||||.|||||||
Sbjct  809  ACCATCATCTCTTTCAGTTTTTCAAACTCCCACAGATGCATCACGGAACAACCCCAAGTCACCACAGAAACCTA  882

Query  467  TCGTTAGAGTCTTCCTGCCCAACAAACAGAGGACAGTGGTACCTGCAAGGTGTGGAGTTACAGTCCGAGACAGT  540
            |||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||.|||||||||
Sbjct  883  TCGTTAGAGTCTTCCTGCCCAACAAACAGAGGACAGTGGTACCCGCAAGATGTGGTGTTACAGTTCGAGACAGT  956

Query  541  CTAAAGAAAGCACTGATGATGAGAGGTCTAATCCCAGAGTGCTGTGCTGTTTACAGAATTCAGGATGG------  608
            |||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||      
Sbjct  957  CTAAAGAAAGCACTGATGATGAGAGGTCTCATCCCAGAATGCTGTGCTGTTTACAGAATTCAGGATGGGTATGG  1030

Query  609  ---AGAGAAGAAACCAATTGGTTGGGACACTGATATTTCCTGGCTTACTGGAGAAGAATTGCATGTGGAAGTGT  679
               ||||||||||||||||||.||||||||.||.||||||||||||||||||||.||.||.|||||.|||||..
Sbjct 1031  TTTAGAGAAGAAACCAATTGGCTGGGACACGGACATTTCCTGGCTTACTGGAGAGGAGTTACATGTTGAAGTAC  1104

Query  680  TGGAGAATGTTCCACTTACAACACACAACTTTGTACGAAAAACGTTTTTCACCTTAGCATTTTGTGACTTTTGT  753
            ||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.
Sbjct 1105  TGGAGAATGTCCCACTTACAACACACAACTTTGTACGGAAAACTTTTTTCACCTTAGCATTTTGTGACTTTTGC  1178

Query  754  CGAAAGCTGCTTTTCCAGGGTTTCCGCTGTCAAACATGTGGTTATAAATTTCACCAGCGTTGTAGTACAGAAGT  827
            ||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1179  CGAAAGCTGCTTTTCCAGGGTTTCCGTTGTCAAACATGTGGTTATAAATTTCACCAGCGTTGTAGTACAGAGGT  1252

Query  828  TCCACTGATGTGTGTTAATTATGACCAACTTGATTTGCTGTTTGTCTCCAAGTTCTTTGAACACCACCCAATAC  901
            |||||||||||||||.|||||||||||||||||                   ||||||||.||.||||||.|||
Sbjct 1253  TCCACTGATGTGTGTAAATTATGACCAACTTGA-------------------TTCTTTGAGCATCACCCAGTAC  1307

Query  902  CACAGGAAGAGGCGTCCTTAGCAGAGACTGCCCTAACATCTGGATCATCCCCTTCCGCACCCGCCTCGGACTCT  975
            |||||||.|||||.|||||..|||||||||||||..|||||||   ||||.|||||||||||.||||.||||||
Sbjct 1308  CACAGGAGGAGGCCTCCTTCCCAGAGACTGCCCTTCCATCTGG---ATCCTCTTCCGCACCCCCCTCAGACTCT  1378

Query  976  ATTGGGCCCCAAATTCTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATTCCACAGCCCTTCCGACCAGCAGA  1049
            |.||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379  ACTGGGCCCCAAATCCTCACCAGTCCATCTCCTTCAAAATCCATTCCAATTCCACAGCCCTTCCGACCAGCAGA  1452

Query 1050  TGAAGATCATCGAAATCAATTTGGGCAACGAGACCGATCCTCATCAGCTCCCAATGTGCATATAAACACAATAG  1123
            ||||||||||||.|||||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||.|
Sbjct 1453  TGAAGATCATCGCAATCAGTTTGGGCAACGAGACCGGTCCTCCTCAGCTCCCAATGTTCATATAAACACAATTG  1526

Query 1124  AACCTGTCAATATTGAT------------------------------------GACTTGATTAGAGACCAAGGA  1161
            |.|||||.|||||.|||                                    ||.||||||||||||||.||.
Sbjct 1527  AGCCTGTGAATATCGATGAAAAATTCCCAGAAGTGGAATTACAGGATCAAAGGGATTTGATTAGAGACCAGGGG  1600

Query 1162  TTTCGTGGTGATGGAGGATCAACCACAGGTTTGTCTGCTACCCCCCCTGCCTCATTACCTGGCTCACTAACTAA  1235
            ||||||||||||||||                                                          
Sbjct 1601  TTTCGTGGTGATGGAG----------------------------------------------------------  1616

Query 1236  CGTGAAAGCCTTACAGAAATCTCCAGGACCTCAGCGAGAAAGGAAGTCATCTTCATCCTCAGAAGACAGGAATC  1309
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1310  GAATGAAAACACTTGGTAGACGGGACTCGAGTGATGATTGGGAGATTCCTGATGGGCAGATTACAGTGGGACAA  1383
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1384  AGAATTGGATCTGGATCATTTGGAACAGTCTACAAGGGAAAGTGGCATGGTGATGTGGCAGTGAAAATGTTGAA  1457
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1458  TGTGACAGCACCTACACCTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAGTACTCAGGAAAACACGACATG  1531
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1532  TGAATATCCTACTCTTCATGGGCTATTCCACAAAGCCACAACTGGCTATTGTTACCCAGTGGTGTGAGGGCTCC  1605
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1606  AGCTTGTATCACCATCTCCATATCATTGAGACCAAATTTGAGATGATCAAACTTATAGATATTGCACGACAGAC  1679
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1680  TGCACAGGGCATGGATTACTTACACGCCAAGTCAATCATCCACAGAGACCTCAAGAGTAATAATATATTTCTTC  1753
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1754  ATGAAGACCTCACAGTAAAAATAGGTGATTTTGGTCTAGCTACAGTGAAATCTCGATGGAGTGGGTCCCATCAG  1827
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1828  TTTGAACAGTTGTCTGGATCCATTTTGTGGATGGCACCAGAAGTCATCAGAATGCAAGATAAAAATCCATACAG  1901
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1902  CTTTCAGTCAGATGTATATGCATTTGGAATTGTTCTGTATGAATTGATGACTGGACAGTTACCTTATTCAAACA  1975
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 1976  TCAACAACAGGGACCAGATAATTTTTATGGTGGGACGAGGATACCTGTCTCCAGATCTCAGTAAGGTACGGAGT  2049
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 2050  AACTGTCCAAAAGCCATGAAGAGATTAATGGCAGAGTGCCTCAAAAAGAAAAGAGATGAGAGACCACTCTTTCC  2123
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 2124  CCAAATTCTCGCCTCTATTGAGCTGCTGGCCCGCTCATTGCCAAAAATTCACCGCAGTGCATCAGAACCCTCCT  2197
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 2198  TGAATCGGGCTGGTTTCCAAACAGAGGATTTTAGTCTATATGCTTGTGCTTCTCCAAAAACACCCATCCAGGCA  2271
                                                                                      
Sbjct 1617  --------------------------------------------------------------------------  1616

Query 2272  GGGGGATATGGTGCGTTTCCTGTCCAC  2298
                                       
Sbjct 1617  ---------------------------  1616

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