Nucleotide Global Alignment
Description
- Query:
- TRCN0000489958
- Subject:
- XM_017313468.1
- Aligned Length:
- 1904
- Identities:
- 945
- Gaps:
- 844
Alignment
Query 1 ATGTCCCAGCTCTCCTCCACCCTGAAGCGCTACACAGAATCGGCCCGCTACACAGATGCCCACTATGCCAAGTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGGCTATGGTGCCTACACCCCATCCTCCTATGGGGCCAATCTGGCTGCCTCCTTACTGGAGAAGGAGAAACTTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTTTCAAGCCGGTCCCCACCAGCAGCTTCCTCACCCGTCCCCGTACCTATGGCCCCTCCTCCCTCCTGGACTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACCGGGGCCGCCCCCTGCTGAGACCCGACATCACTGGGGGTGGTAAGCGGGCAGAGAGCCAGACCCGGGGTAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAGCGGCCTTTAGGCAGTGGCCTCAGCGGGGGCAGCGGATTCCCTTATGGAGTGACCAACAACTGCCTCAGCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCTGCCCATCAATGCCTATGACCAGGGGGTGACCCTAACCCAGAAGCTGGACAGCCAATCAGACCTGGCCCGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GATTTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCGGACGCGCAAGGAGCTCTGCACCCTGCAGGGGCTCTACCAGACAGCCAGCTGCCCTGAATACCTGGTCGACT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACCTGGAGAACTATGGTCGCAAGGGCAGTGCATCTCAGGTGCCCTCCCAGGCCCCTCCCTCACGAGTCCCTGAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ATCATCAGCCCAACCTACCGACCCATTGGCCGCTACACGCTGTGGGAGACGGGAAAGGGTCAGGCCCCTGGGCC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAGCCGCTCCAGCTC--CCCGGGAAGAGACGGCATGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAA 812
|..|| |.||||.|.|| || ||||||.||||||||||||||||||||||||||||||||
Sbjct 1 ----------ATGTCGTCTCGGGCACAG--GG---GAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAA 59
Query 813 CCTTGGGAACACGTGCTTCATGAACTCAATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGAGAGATTACTGCC 886
|||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||.|||||||||||||||
Sbjct 60 CCTTGGGAACACGTGCTTCATGAACTCAATTCTTCAGTGCCTGAGCAACACCCGAGAGCTGAGAGATTACTGCC 133
Query 887 TCCAGAGGCTCTACATGCGGGACCTGCACCACGGCAGCAATGCACACACAGCCCTCGTGGAAGAGTTTGCAAAA 960
||||||||||.||||||||||||||...||||..|||||..||.|||||.||||||.|||||||||||||||||
Sbjct 134 TCCAGAGGCTGTACATGCGGGACCTCGGCCACACCAGCAGCGCTCACACGGCCCTCATGGAAGAGTTTGCAAAA 207
Query 961 CTAATTCAGACCATATGGACTTCATCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG 1034
|||||.||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 CTAATCCAGACCATATGGACGTCGTCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG 281
Query 1035 ATATGCACCGCGCTTTGTTGGCTATAATCAGCAGGATGCTCAGGAGTTCCTTCGCTTTCTTCTGGATGGGCTCC 1108
||||||.||.|||||..|.||||||||||||||||||||||||||.||||||||.||.|||||||||||.||||
Sbjct 282 ATATGCGCCACGCTTCATGGGCTATAATCAGCAGGATGCTCAGGAATTCCTTCGTTTCCTTCTGGATGGTCTCC 355
Query 1109 ATAACGAGGTGAACCGAGTGACACTGAGACCTAAGTCCAACCCTGAGAACCTCGATCATCTTCCTGATGACGAG 1182
|.||.|||||||||||.|||.||...||.||||||.|||.||||||||.|||.||||||||.||||||||.||.
Sbjct 356 ACAATGAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGCCCTGAGACCCTTGATCATCTCCCTGATGAAGAA 429
Query 1183 AAAGGCCGACAGATGTGGAGAAAATATCTAGAACGGGAAGACAGTAGGATCGGGGATCTCTTTGTTGGGCAGCT 1256
||.||.||||||||||||||.||.|||||.|||.|||||||||||.||||.|||||||||||.|||||||||||
Sbjct 430 AAGGGGCGACAGATGTGGAGGAAGTATCTGGAAAGGGAAGACAGTCGGATTGGGGATCTCTTCGTTGGGCAGCT 503
Query 1257 AAAGAGCTCGCTGACGTGTACAGATTGTGGTTACTGTTCTACGGTCTTCGACCCCTTCTGGGACCTCTCACTGC 1330
.||||||||.||.||.||.||.||||||||.|||||.|||||.||||||||.|||||||||||.|||||..|||
Sbjct 504 GAAGAGCTCCCTCACATGCACCGATTGTGGCTACTGCTCTACAGTCTTCGATCCCTTCTGGGATCTCTCGTTGC 577
Query 1331 CCAT----------TGCTAAGC---------------------------------------------------- 1342
|||| ||||.|||
Sbjct 578 CCATCGCAAAGGTATGCTCAGCTGTGGTCCCCACTTCAGCATTGCGCTCGGGGCTCAGTGAGGTCGTGACCTCT 651
Query 1343 -------------------------GAGGTTATCCTGAGGTGACATTAATGGACTGCATGAGGCTCTTCACCAA 1391
|||||||.|||||||||||.||||||||.||.|||||||||||||||||
Sbjct 652 GACCTGGACCCTTTTCCTTTGCAGAGAGGTTACCCTGAGGTGACGTTAATGGATTGTATGAGGCTCTTCACCAA 725
Query 1392 AGAGGATGTGCTTGATGGAGATGAAAAGCCAACATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAAAGAAGT 1465
||||||..|..|.|||||.|||||.||||||||.|||||.||||||||||.|||||||||.||.|||||.||||
Sbjct 726 AGAGGACATATTGGATGGTGATGAGAAGCCAACTTGCTGCCGCTGCCGAGCCAGAAAACGATGCATAAAAAAGT 799
Query 1466 TCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGC 1539
||||..|||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||
Sbjct 800 TCTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTCAGAATCCAGGATACGAACCAGC 873
Query 1540 AAGCTCACAACATTTGTGAACTTCCCCCTAAGAGACCTGGACTTAAGAGAATTTGCCTCAGAAAACACCAACCA 1613
||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 874 AAGCTCACAACATTTGTGAATTTCCCACTAAGAGACCTGGACTTGAGAGAATTTGCTTCAGAAAACACCAACCA 947
Query 1614 TGCTGTTTACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTC 1687
||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.|
Sbjct 948 TGCTGTTTACAACCTGTATGCTGTGTCCAATCACTCCGGAACCACCATGGGAGGCCACTATACAGCCTACTGCC 1021
Query 1688 GCAGTCCAGGGACAGGAGAATGGCACACTTTCAACGACTCCAGCGTCACTCCCATGTCCTCCAGCCAAGTGCGC 1761
|.|||||.|..|||||.|||||||||||||||||.||.|||||.|||||.||||||||||||||||||||||||
Sbjct 1022 GAAGTCCGGTTACAGGCGAATGGCACACTTTCAATGATTCCAGTGTCACACCCATGTCCTCCAGCCAAGTGCGC 1095
Query 1762 ACCAGCGACGCCTACCTGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAATG 1815
||||||||||||||..||||||||||.|||||||||||.||.||||||||.|||
Sbjct 1096 ACCAGCGACGCCTATTTGCTCTTCTATGAACTGGCCAGTCCACCCTCCCGTATG 1149
