Nucleotide Global Alignment
Description
- Query:
- TRCN0000491311
- Subject:
- XR_001782584.1
- Aligned Length:
- 2438
- Identities:
- 813
- Gaps:
- 1494
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGGAGCCCTCTCGCGGCCGCGGCAGCAGCAGCAGCGCCCGCCCCGGCTGCAGTCCGGCCGCCGCTGCCGCCG 74
Query 1 ------------------------------------ATGAGTGAGGCGGTTCGGGTACCCTCGCCCGCCACTCC 38
|||||||||||||.|||||..|.||||||||...|.||
Sbjct 75 CCGCCACCGCCTCGCGCCTCAGCCGCCCGGCCAGACATGAGTGAGGCGGCTCGGGATCTCTCGCCCGGAGCGCC 148
Query 39 GCTGGTGGTGGCGGCGGCCGCGCCTGAGGAGAGGAAAGGGAAGGAGTCAGAGCGCGAGAAGCTGCCGCCCATCG 112
||.||.|||.||.||||||||.||.|||||||||||.|||||.||..|.|||||||||||||||||||||||||
Sbjct 149 GCCGGCGGTAGCCGCGGCCGCCCCGGAGGAGAGGAAGGGGAAAGAACCGGAGCGCGAGAAGCTGCCGCCCATCG 222
Query 113 TATCGGCGGGCGCCGGCGCGACCGCGGGTTTGGACAGAGGAGCCAAAGGCCAAATTTCCACTTTCAGCAGTTTT 186
|..|| ||||||||..|||||||.||||||||||||.||||.|||||.||||||||.||||||||.|||
Sbjct 223 TGACG------GCCGGCGCAGCCGCGGGCTTGGACAGAGGATCCAAGGGCCAGATTTCCACCTTCAGCAGCTTT 290
Query 187 ATTTCAGCTGTTAGCCCGAAGAAAGAAGCTGCTGAAAACAGAAGTTCACCTGCACATCTTGTTTTCCCTAACAT 260
.|.||..||||.|.||.||||||.|||||||||||.||||||||.||.|||.|.||.||||.|.||||||||||
Sbjct 291 GTCTCGACTGTCACCCAGAAGAAGGAAGCTGCTGAGAACAGAAGCTCGCCTACCCACCTTGCTCTCCCTAACAT 364
Query 261 CAAGAATGTGAGAGAACCACCACCAATTTGCCTTGATGTTAGACAAAAACAGCGTACATCTATGGATGCATCAT 334
||.||||||||||||.|.||||||||||||.|||||||||||||||||||||||.|..|||.||||.||.|.|.
Sbjct 365 CAGGAATGTGAGAGACCTACCACCAATTTGTCTTGATGTTAGACAAAAACAGCGCATGTCTGTGGAAGCGTTAC 438
Query 335 CATCCGAAATGAAGGCCCCAGTCCTTCCAGAACCTATTCTTCCTATCCAGCCCAAAACTGTGAAAGACTTTCAG 408
||||.|||.||||||.|||...|||||||||||||..||||||||.|||||||||||||||.|||||||||.||
Sbjct 439 CATCTGAAGTGAAGGTCCCGCCCCTTCCAGAACCTTCTCTTCCTAGCCAGCCCAAAACTGTAAAAGACTTTGAG 512
Query 409 GAAGATGTAGAAAAAGTTAAGTCATCAGGAGATTGGAAAGCAGTACATGATTTTTATCTAACAACGTTTGATTC 482
||||||.|||||||||.|.||.|..||||..|||||||..|||||||||.|||||||.|||||.|.||||||||
Sbjct 513 GAAGATTTAGAAAAAGCTGAGGCCACAGGGAATTGGAAGACAGTACATGCTTTTTATATAACAGCATTTGATTC 586
Query 483 TTTCCCAGAATTAAATGCTGCATTTAAGAAAGATGCCACTGCCTCATTTAACACCATTGAAGACTCTGGGATTA 556
||||.|||||.||||..||||||||||||||||||||||.|||||||||||.||.|||||.|||||||||.|||
Sbjct 587 TTTCACAGAACTAAACACTGCATTTAAGAAAGATGCCACGGCCTCATTTAATACTATTGAGGACTCTGGGCTTA 660
Query 557 ATGCTAAATTTGTGAATGCTGTGTATGATACCTTACTTAATACTCCTCAAGACGTTCAGAAGACAGTATTAAAG 630
||||.||.||.|||||||||||||.||||.||||||||||||||||||||||..|.||||||.|||||||.|||
Sbjct 661 ATGCCAATTTGGTGAATGCTGTGTTTGATGCCTTACTTAATACTCCTCAAGATATCCAGAAGTCAGTATTGAAG 734
Query 631 GGAATCATTAACAGCCTGTTACGAGAATGGAAAGGTCCACGAACAAAAGATGATCTTAGAGCATATTTTATACT 704
|||||||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GGAATCATTAACAGCTTGTTACAAGAATGGAAAGGTCCACGAACAAAAGATGATCTTAGAGCATATTTTATACT 808
Query 705 TTTACAGAATCCTCAGTTTAATAACACATCTACGTATGTCATCTATGCTCACTTGCTACGACAGATAGCTACCT 778
.||||||
Sbjct 809 GTTACAG------------------------------------------------------------------- 815
Query 779 TAGTGGAAGCTGACCATCATTTCCTAGTTCACTGGTTTAAAAAATTGTCCCAGAAGAGGTTCAAACAATTGGTA 852
|||.||||||||||..|||||.|||.|||||
Sbjct 816 -------------------------------------------ATTATCCCAGAAGAAATTCAAGCAACTGGTA 846
Query 853 GAGAGATTGCTGCAATTTATTTCTTTACGCCTGTTTCCTGCAAAGCCTGAAGAATTTCCACCTATAACAAAGTG 926
||||||||||||||||||.||||||||||.||||||||.|||||.|||||||||||.||.|||.||||.|||||
Sbjct 847 GAGAGATTGCTGCAATTTGTTTCTTTACGGCTGTTTCCAGCAAAACCTGAAGAATTCCCGCCTCTAACGAAGTG 920
Query 927 TTCCTGGTGGATTCCATCAGCCGCTAAAGTGTTGGCTTTACTTAATACTGCAAACAATTTAGTTCACCCTCCCC 1000
|.||||||||||.|||||||||||||||||..|||||||.|||||.|||||.||||||||.|||||||||||||
Sbjct 921 TACCTGGTGGATCCCATCAGCCGCTAAAGTTCTGGCTTTGCTTAACACTGCCAACAATTTGGTTCACCCTCCCC 994
Query 1001 TTATTCCTTATACTGATTTCTATAATTCTACATTGGATCACATTGATCTCATGGAAGAATATCATACTTGGCAA 1074
|..|||||||.||||||||||||||||||||..|||||||||||||||||||||||||.|
Sbjct 995 TCGTTCCTTACACTGATTTCTATAATTCTACCCTGGATCACATTGATCTCATGGAAGAGT-------------- 1054
Query 1075 AACTTTGGAAACTCTCACAGGTTTTCCTTCTGTCAGTACCCATTCGTTATTTCTGTAGCTGCAAAAAAAATCAT 1148
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1149 TATTCAGAGAGACTCAGAGCAACAGATGATAAACATCGCAAGGCAAAGTCTGGTGGATAAAGTATCTCGAAGAC 1222
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1223 AGAGACCTGATATGAATATATTATTTCTAAATATGAAAGTAAGACGGACACATCTGGTTAGCGATTCACTTGAT 1296
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1297 GAGCTAACCCGGAAAAGAGCCGATTTGAAAAAGAAGTTAAAAGTTACATTTGTAGGGGAAGCTGGTTTGGATAT 1370
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1371 GGGTGGTTTGACTAAAGAATGGTTCCTTCTTCTAATTCGCCAAATTTTTCATCCAGATTATGGCATGTTTACAT 1444
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1445 ATCACAAGGATTCACACTGCCATTGGTTTAGCAGCTTTAAATGTGATAACTATTCTGAATTCCGATTGGTTGGA 1518
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1519 ATTCTTATGGGACTAGCTGTTTATAACAGCATCACCTTGGATATTCGTTTCCCTCCCTGCTGTTACAAGAAATT 1592
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1593 ATTGAGCCCTCCCATCATTCCTAGTGATCAAAATATACCAGTAGGCATCTGCAATGTTACCGTGGACGACTTAT 1666
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1667 GTCAAATTATGCCTGAGTTGGCCCATGGATTAAGTGAACTCTTATCACATGAAGGCAATGTTGAAGAAGATTTC 1740
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1741 TATTCAACATTTCAGGTTTTTCAAGAAGAATTTGGAATAATCAAGTCCTATAATTTAAAGCCCGGTGGTGATAA 1814
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1815 AATTTCAGTTACCAATCAAAATAGAAAAGAATATGTACAGCTTTATACTGACTTCCTTCTGAACAAATCCATCT 1888
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1889 ATAAGCAGTTTGCTGCATTTTATTATGGATTTCATAGTGTGTGTGCTTCAAATGCCCTAATGCTGCTTCGTCCA 1962
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 1963 GAAGAGGTTGAAATTTTGGTCTGTGGAAGTCCTGACCTGGATATGCATGCTCTGCAGAGAAGTACTCAGTATGA 2036
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 2037 TGGCTATGCAAAAACGGACTTAACTATAAAATACTTTTGGGATGTTGTGCTTGGATTTCCTCTTGATCTTCAAA 2110
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 2111 AGAAGTTGCTACATTTTACTACAGGGAGTGACAGAGTACCTGTAGGAGGGATGGCTGATTTGAACTTTAAAATC 2184
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 2185 TCAAAGAATGAAACTTCTACTAACTGCTTACCTGTGGCCCATACCTGCTTCAATCAACTTTGCCTTCCCCCCTA 2258
Sbjct 1055 -------------------------------------------------------------------------- 1054
Query 2259 CAAGAGCAAAAAGGATCTGAAACAGAAATTGATCATTGGAATTTCAAATTCAGAAGGTTTTGGACTTGAG 2328
Sbjct 1055 ---------------------------------------------------------------------- 1054
