Nucleotide Global Alignment

Description

Query:
TRCN0000491406
Subject:
XM_011241057.1
Aligned Length:
1257
Identities:
824
Gaps:
321

Alignment

Query    1  ATGAGGTTGATCCTGTTTTTTGGTGCCCTTTTTGGGCATATCTACTGTCTAGAAACATTTGTGGGAGACCAAGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TCTTGAGATTGTACCAAGCAATGAAGAACAAATTAAAAATCTGCTACAATTGGAGGCTCAAGAACATCTCCAGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGATTTTTGGAAATCACCCACCACCCCAGGGGAGACAGCCCACGTCCGAGTTCCCTTCGTCAACGTCCAGGCA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GTCAAAGTGTTCTTGGGGTCCCAGGGAATTGCCTATTCCATCATGATTGAAGACGTGCAGGTCCTGTTGGACAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGAGAATGAAGAAATGCTTTTTAA-TAGGAGAAGAGAACGGAGTGG---TAACTTCAATTTTGGGGCCTACCAT  366
                         |||||.||.|| .||.| ||||||   |.||||   |||||||||.|||||||||||||||
Sbjct    1  -------------ATGCTGTTCAACCAGCA-AAGAGA---GCGTGGCACTAACTTCAACTTTGGGGCCTACCAT  57

Query  367  ACCCTGGAAGAGATTTCCCAAGAAATGGATAACCTCGTGGCTGAGCACCCCGGTCTAGTGAGCAAAGTGAATAT  440
            ||||||||||||||||.||||||||||||||||||||||||||||.||||.|||||||||||||||||||||||
Sbjct   58  ACCCTGGAAGAGATTTACCAAGAAATGGATAACCTCGTGGCTGAGAACCCTGGTCTAGTGAGCAAAGTGAATAT  131

Query  441  TGGCTCTTCTTTTGAGAACCGGCCTATGAACGTGCTCAAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGC  514
            .||.||.||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||||||||.|||||||
Sbjct  132  CGGTTCATCTTTTGAAAATCGGCCCATGAATGTGCTCAAGTTCAGCACCGGAGGAGACAAGCCAGCCATCTGGC  205

Query  515  TGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCT  588
            |.|||||.||||||||.|||||||||||||||||.||||||||.|||||.|||||||||||||||||||..|||
Sbjct  206  TTGATGCGGGGATCCACGCTCGAGAGTGGGTTACGCAAGCTACTGCACTGTGGACAGCAAATAAGATTGCGTCT  279

Query  589  GATTATGGAAAGGACCCATCCATCACTTCCATTCTGGACGCCCTGGATATCTTCCTCCTGCCAGTCACAAACCC  662
            ||||||||.|..||.|||.||||||||||..||||..|..|.||||||.|||||||.|||||.|||||.|||||
Sbjct  280  GATTATGGGACTGATCCAGCCATCACTTCTCTTCTCAATACTCTGGATGTCTTCCTGCTGCCTGTCACGAACCC  353

Query  663  TGATGGATACGTGTTCTCTCAAACCAAAAATCGTATGTGGCGGAAGACCCGGTCCAA--GGTATCTGGAAGCCT  734
            |||||||||.||||||||.||||||...||||||||||||||.|||||||||||.||  ||  ||.||||||.|
Sbjct  354  TGATGGATATGTGTTCTCCCAAACCTCCAATCGTATGTGGCGAAAGACCCGGTCTAAACGG--TCGGGAAGCTT  425

Query  735  CTGTGTTGGTGTGGATCCTAACCGGAACTGGGATGCAGGTTTTGGAGGACCTGGAGCCAGCAGCAACCCTTGCT  808
            |||||||||||||||||||||.|||||||||||.|||..|||.|||||||||||||||||.|||||||||||||
Sbjct  426  CTGTGTTGGTGTGGATCCTAATCGGAACTGGGACGCAAATTTCGGAGGACCTGGAGCCAGTAGCAACCCTTGCT  499

Query  809  CTGATTCATACCACGGACCCAGTGCCAACTCTGAAGTTGAAGTGAAATCCATAGTGGACTTCATCAAGAGTCAT  882
            |||||||||||||.|||||||||.||||.|||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  500  CTGATTCATACCATGGACCCAGTCCCAATTCTGAAGTTGAAGTGAAATCCATAGTGGACTTCATCAAGAGCCAC  573

Query  883  GGAAAAGTCAAGGCCTTCATTACCCTCCACAGCTATTCCCAGCTGCTGATGTTCCCCTATGGGTACAAATGTAC  956
            ||.||||||||.||.|||||||||||.||||||||||||||.|||||.||||||||||||||.||.||||||.|
Sbjct  574  GGGAAAGTCAAAGCGTTCATTACCCTTCACAGCTATTCCCAACTGCTCATGTTCCCCTATGGCTATAAATGTGC  647

Query  957  CAAGTTAGATGACTTTGATGAGCTGAGTGAAGTGGCCCAAAAGGCTGCCCAATCTCTGAGAAGCCTGCATGGCA  1030
            ||||..||||||||||.||||||||..||||||||||||||.|||||||||.|||.|||.|||.||.||.||||
Sbjct  648  CAAGCCAGATGACTTTAATGAGCTGGATGAAGTGGCCCAAAGGGCTGCCCAGTCTTTGAAAAGACTCCACGGCA  721

Query 1031  CCAAGTACAAAGTGGGACCAATCTGCTCTGTCATCTACCAAGCCAGTGGAGGAAGCATTGACTGGTCCTATGAT  1104
            |||..||||||||||||||.|||||.||||||||||||||.||||||||.||||||||.||||||.|.|||||.
Sbjct  722  CCAGTTACAAAGTGGGACCCATCTGTTCTGTCATCTACCAGGCCAGTGGCGGAAGCATCGACTGGGCTTATGAC  795

Query 1105  TATGGCATCAAGTACTCATTTGCCTTTGAACTGAGAGACACAGGGCGCTACGGCTTCCTCTTGCCAGCCCGTCA  1178
            ..|||||||||.||||||||||||||||||||||||||||||||...|||.|||||||||.||||||||...||
Sbjct  796  CTTGGCATCAAATACTCATTTGCCTTTGAACTGAGAGACACAGGCTACTATGGCTTCCTCCTGCCAGCCAAGCA  869

Query 1179  GATCCTGCCCACAGCCGAGGAGACCTGGCTTGGCTTGAAGGCAATCATGGAGCATGTGCGAGACCACCCCTAT  1251
            ||||.||||||||||.||.|||||||||||||||.|||||.|.|||||||||||.||.||||||||||||||.
Sbjct  870  GATCTTGCCCACAGCAGAAGAGACCTGGCTTGGCCTGAAGACCATCATGGAGCACGTACGAGACCACCCCTAC  942

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