Nucleotide Global Alignment
Description
- Query:
- TRCN0000491571
- Subject:
- XM_011537501.2
- Aligned Length:
- 2066
- Identities:
- 1578
- Gaps:
- 424
Alignment
Query 1 ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA 74
Query 75 CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG 148
Query 149 TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA 222
Query 223 ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT 296
Query 297 CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG 370
Query 371 ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG 444
Query 445 GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA 518
Query 519 AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA 592
Query 593 TAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAA 666
Query 667 GAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGA 740
Query 741 CTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAA 814
Query 815 AGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG 888
Query 889 TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA 962
Query 963 GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA 1036
Query 1037 AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG 1110
Query 1111 CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT 1184
Query 1185 GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA 1258
Query 1259 TGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCGGACTCTCATACAGGCGGGCGCCAGT 1332
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1259 TGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCCGACTCTCATACAGGCGGGCGCCAGT 1332
Query 1333 GCATCTTCTAGCATTGTCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGGTCAGATTCTTTTTTCACTAGCGGC 1406
|||||||||| ||||||
Sbjct 1333 GCATCTTCTA--------------------------------------GGTCAG-------------------- 1348
Query 1407 GGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTCATTGGACCCTATTATCGGAAGCTGCACATG--GAAAG 1478
||||..|| ||.||||||| || .|||
Sbjct 1349 ------------ATGTGCTG------------------------------ATGGGAAGCT-----TGTCCAAA- 1374
Query 1479 CAAGGGGA-ACA--AAGAAATCCTGATCTTGGGAATATCTGCCTTTATCTTCTTAATGTTAACGGTCACGGAGC 1549
||.|..|| ||| .|||| |.|||.| ||.|||||.||
Sbjct 1375 CACGCTGAGACAGTCAGAA-------------------CAGCCGT------------------GGACACGGCGC 1411
Query 1550 --------TGCTGGACGTCTCCATGGAGCTGGGCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCG 1615
|||.| .||.| |||| |||.|.|| ||
Sbjct 1412 CCCGTATGTGCAG-----ATCAA--GAGC-------------------AGCACACG----------------CG 1443
Query 1616 TGGTCACCGAGGAGATCGCCACCTCCA--TCGAACCCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCTCCA 1687
||| ||||.|| |.| |.||.|..|||| |.||
Sbjct 1444 TGG-----------------ACCTGCAGGTGG--------CACGGCGCCCTG------------------TACA 1474
Query 1688 TAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACGAGC-TCACGGTGCTGGTGTTCCT-CACCTTGTCAGTGG 1759
||..|.|| |.|||| .|| |||..|||..||| ||
Sbjct 1475 TACAGATC-------------------------AAGAGCAGCA---TGCGTGTGGACCTGCA------------ 1508
Query 1760 TGGTGATGAAGTTTCTCCTGGCGGCGCTGGTCCTGTCTCTCATTC-TGCCG---AGGAGCAGCCAGTACATCAA 1829
||||| ..|||||| |.|.|.| |||.| |.||||||| ||| |..
Sbjct 1509 -GGTGA-------------CACGGCGC-----------CCCGTACGTGCAGATCAAGAGCAGC----ACA-CGC 1552
Query 1830 GTGGATCGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCTTTGT-CCTGGGGAGCCGGGCGCGAAGAGCG 1902
||||| .||||.|| || .||.|.||.| || || |.||..||.| ||||||.
Sbjct 1553 GTGGA-----CCTGCAGG---TG-GCACGGCACC-------CC---GTACATGCAGATC--------AAGAGCA 1599
Query 1903 G-----GCGTCATCTCTCGGGAGGTGTACCTCCTTATACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCCCG 1971
| |||| |||.||||.| || ||| .|||| .|||||||
Sbjct 1600 GCACACGCGT-------------GTGGACCTGC--------AG-GTG-GCACG-------------GCGCCCCG 1637
Query 1972 ---GTGCTG-TGGAGAGCTGCAATCACGAGGTGTGTGCCCAGACC----GGAGAGACGGTCCAGCCTC 2031
||||.| |..|||||.|||..| ||||| |||| ||
Sbjct 1638 TACGTGCAGATCAAGAGCAGCACGC-----GTGTG------GACCTGCAGG----------------- 1677
