Nucleotide Global Alignment

Description

Query:
TRCN0000491605
Subject:
XR_002959547.1
Aligned Length:
2752
Identities:
1051
Gaps:
1691

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCGGTCCCCGCGGCGGCGGCGGCTGCCCAGTGACAGCGGCGGCGGTGCCAGGTCGGCCGTGGTAGCGTAGGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGTGAGCCGGGGCCGTGCGCGAAGAGACCTCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGGCGCGGAGCGAAAGGCCGGCGTGAGTGAGCGCGGAGACAGTGGCCGCCGGCGGCCCAACCCGTCTATCCCT  222

Query    1  ---------------ATGAGCCACATCCAGATCCCGCCGGGGCTCACGGAGCTGCTGCAGGGCTACACGGTGGA  59
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCGGCCGCCGCCGGCATGAGCCACATCCAGATCCCGCCGGGGCTCACGGAGCTGCTGCAGGGCTACACGGTGGA  296

Query   60  GGTGCTGCGACAGCAGCCGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCG  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGTGCTGCGACAGCAGCCGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCG  370

Query  134  CCCCAGCCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCCTGGGCCACCCCCCGCCAGAACCCGGCCCGGAC  207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCCCAGCCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCCTGGGCCACCCCCCGCCAGAACCCGGCCCGGAC  444

Query  208  CGTGTCGCCGACGCCAAAGGGGACAGCGAGTCGGAGGAGGACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATT  281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGTGTCGCCGACGCCAAAGGGGACAGCGAGTCGGAGGAGGACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATT  518

Query  282  TAATAGACGAGTATCAGTCTGTGCTGAGACCTATAACCCTGATGAGGAAGAGGAAGATACAGATCCAAGGGTGA  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TAATAGACGAGTATCAGTCTGTGCTGAGACCTATAACCCTGATGAGGAAGAGGAAGATACAGATCCAAGGGTGA  592

Query  356  TTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAAGCTTGCAAAGATATTCTCCTTTTCAAAAATCTT  429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAAGCTTGCAAAGATATTCTCCTTTTCAAAAATCTT  666

Query  430  GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGTCATTGA  503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGTCATTGA  740

Query  504  CCAAGGAGATGATGGAGACAACTTTTATGTCATAGAACGGGGAACTTATGACATTTTAGTAACAAAAGATAATC  577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCAAGGAGATGATGGAGACAACTTTTATGTCATAGAACGGGGAACTTATGACATTTTAGTAACAAAAGATAATC  814

Query  578  AAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCGAGA  651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCGAGA  888

Query  652  GCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATCATAGT  725
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATCATAGT  962

Query  726  GAAAAATAATGCAAAGAAGAGGAAGATGTTTGAATCATTTATTGAGTCTGTGCCCCTCCTTAAATCACTAGAGG  799
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAAAAATAATGCAAAGAAGAGGAAGATGTTTGAATCATTTATTGAGTCTGTGCCCCTCCTTAAATCACTAGAGG  1036

Query  800  TGTCAGAACGAATGAAGATTGTGGATGTAATAGGAGAGAAGATCTATAAGGATGGAGAACGCATAATCACTCAG  873
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGTCAGAACGAATGAAGATTGTGGATGTAATAGGAGAGAAGATCTATAAGGATGGAGAACGCATAATCACTCAG  1110

Query  874  ACTAAATCAAACAAGGATGGTGGGAACCAGGAGGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTTTGGAGA  947
                              ||||                              |.||||       ||   ||.|
Sbjct 1111  ------------------GGTG------------------------------AAAAGG-------CT---GATA  1126

Query  948  GCTTGCCCTGGTCACCAACAAACCCAGAG-CTGCCTCAGCTTATGCAGTTGGAG-ATGTCAAATGCTTA-----  1014
            ||||       |.||     |.|..|||| |||.|         |.|||  ||| ||.|    ||.|||     
Sbjct 1127  GCTT-------TTAC-----ATCATAGAGTCTGGC---------GAAGT--GAGCATCT----TGATTAGAAGC  1173

Query 1015  --GTTATGGATGTACAAGCATTCGAGAGGCTTCTGGGGCCCTGCATGGACATCATGAAGAGGAACATCTCACAC  1086
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  AGGTTATGGATGTACAAGCATTCGAGAGGCTTCTGGGGCCCTGCATGGACATCATGAAGAGGAACATCTCACAC  1247

Query 1087  TATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAG--------------  1146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1248  TATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGCATGGGGAATC  1321

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1322  AAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCACATTGTCCACATCAGGCAAGCCCTGCACTGACG  1395

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1396  GTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTCAAT  1469

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1470  GAATTAGAGCTCATGCCCCTTTTCTGGCTTTGCTGTTGATTTTGGATGGTAGAGAATATTCCTGAGAGCCTTCC  1543

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1544  TTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATGTGCTATT  1617

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1618  GTCCTGTTAGTCAATAGTCTTCATATATAATTGTGTTACATATATTGCTGTAGACTCTCAGAAATCAGGGTAGA  1691

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1692  GCTTTTCCTTTGAGCAGTTTAATGAGTGAATTCAGCAGCAAAGTCGCAAGAAATGGTTCTCCAGCCAGGAGAGG  1765

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1766  TTATGTTTATCCTCTGATTGCCCGTTTTCTCTGCACACAGTGATATCGTATTCAGTGAGAGGTGCTGTTGGCAC  1839

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1840  CCAGCAGCACCCTGGGCACACAGCATTTCATGTCATGTCACAGTGTACAAGCTACCCTCTAATTCAGAAAGAAG  1913

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1914  AGCATTTTGCACAGAGAAAAATAAAAAGATCCATGAATGTCATCTTTTATCTTTTATTTTCAGTTGGCTGATGT  1987

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 1988  TGGAATTTTTGTTCTTGTCATGAACTTGTAAACCAATCTTGCCAAGATACAAGTTGTTTTGGTTTTTCACTACA  2061

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2062  ATGACCTCTTGTTCCTCCTGTCTTGACTGCTGACGTTCCTCAATGATTCTATTGTCTATTTTATGGGAAGCAGC  2135

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2136  CTTCCCATAGGTTTCCTTTTACACACTGCAGGGCTATCTTTATACTTTAAAAAAAAAAAAAAAAAAAAAAAAAA  2209

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2210  GGACAAGAACTGTCACTAACCTCATGGAGGGGTTTGCGTAAAACCATTTAGCCCACCTTGAGCAAAGGGTAGAT  2283

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2284  TCCGTGTTGTTTTTTTAAGCTCACTGTAATAAAATAAATCTAATTCAGCATTATTGTGCTACCTCAAAGGTAAA  2357

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2358  AAATGTTTTAAGGTCTTCTTTTGGTCCTGAGTTCTATATACAGTGTTTGAAATGTCCTTCATTTGGAATTATTT  2431

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2432  TTTAAATTCTTGGAGTGAATTTTATTTTAATCTGTTTTAATCTTGTATTTTAATCTCAGAAGAATAAGTGATTG  2505

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2506  AAACGTGATCAATTCTTGCTCTGTGGTGTTAAACATATAATGAACAGTCATTAAGAATTAAGTCACTGTTTGCC  2579

Query 1147  --------------------------------------------------------------------------  1146
                                                                                      
Sbjct 2580  ATAAACAAGGTTGATGTTCTTTTTGTTGTTGTTAAGGAAACCCTAGGGCTCGGCTTTACTCTTGATTAATAAAG  2653

Query 1147  --------------  1146
                          
Sbjct 2654  GCTGACAAATCATG  2667

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