Nucleotide Global Alignment
Description
- Query:
- TRCN0000491605
- Subject:
- XR_002959547.1
- Aligned Length:
- 2752
- Identities:
- 1051
- Gaps:
- 1691
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCGGTCCCCGCGGCGGCGGCGGCTGCCCAGTGACAGCGGCGGCGGTGCCAGGTCGGCCGTGGTAGCGTAGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGTGAGCCGGGGCCGTGCGCGAAGAGACCTCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGCGCGGAGCGAAAGGCCGGCGTGAGTGAGCGCGGAGACAGTGGCCGCCGGCGGCCCAACCCGTCTATCCCT 222
Query 1 ---------------ATGAGCCACATCCAGATCCCGCCGGGGCTCACGGAGCTGCTGCAGGGCTACACGGTGGA 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCGGCCGCCGCCGGCATGAGCCACATCCAGATCCCGCCGGGGCTCACGGAGCTGCTGCAGGGCTACACGGTGGA 296
Query 60 GGTGCTGCGACAGCAGCCGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGCTGCGACAGCAGCCGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCG 370
Query 134 CCCCAGCCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCCTGGGCCACCCCCCGCCAGAACCCGGCCCGGAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCCAGCCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCCTGGGCCACCCCCCGCCAGAACCCGGCCCGGAC 444
Query 208 CGTGTCGCCGACGCCAAAGGGGACAGCGAGTCGGAGGAGGACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATT 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTGTCGCCGACGCCAAAGGGGACAGCGAGTCGGAGGAGGACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATT 518
Query 282 TAATAGACGAGTATCAGTCTGTGCTGAGACCTATAACCCTGATGAGGAAGAGGAAGATACAGATCCAAGGGTGA 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TAATAGACGAGTATCAGTCTGTGCTGAGACCTATAACCCTGATGAGGAAGAGGAAGATACAGATCCAAGGGTGA 592
Query 356 TTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAAGCTTGCAAAGATATTCTCCTTTTCAAAAATCTT 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAAGCTTGCAAAGATATTCTCCTTTTCAAAAATCTT 666
Query 430 GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGTCATTGA 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGTCATTGA 740
Query 504 CCAAGGAGATGATGGAGACAACTTTTATGTCATAGAACGGGGAACTTATGACATTTTAGTAACAAAAGATAATC 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAAGGAGATGATGGAGACAACTTTTATGTCATAGAACGGGGAACTTATGACATTTTAGTAACAAAAGATAATC 814
Query 578 AAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCGAGA 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCGAGA 888
Query 652 GCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATCATAGT 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATCATAGT 962
Query 726 GAAAAATAATGCAAAGAAGAGGAAGATGTTTGAATCATTTATTGAGTCTGTGCCCCTCCTTAAATCACTAGAGG 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAAAATAATGCAAAGAAGAGGAAGATGTTTGAATCATTTATTGAGTCTGTGCCCCTCCTTAAATCACTAGAGG 1036
Query 800 TGTCAGAACGAATGAAGATTGTGGATGTAATAGGAGAGAAGATCTATAAGGATGGAGAACGCATAATCACTCAG 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGTCAGAACGAATGAAGATTGTGGATGTAATAGGAGAGAAGATCTATAAGGATGGAGAACGCATAATCACTCAG 1110
Query 874 ACTAAATCAAACAAGGATGGTGGGAACCAGGAGGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTTTGGAGA 947
|||| |.|||| || ||.|
Sbjct 1111 ------------------GGTG------------------------------AAAAGG-------CT---GATA 1126
Query 948 GCTTGCCCTGGTCACCAACAAACCCAGAG-CTGCCTCAGCTTATGCAGTTGGAG-ATGTCAAATGCTTA----- 1014
|||| |.|| |.|..|||| |||.| |.||| ||| ||.| ||.|||
Sbjct 1127 GCTT-------TTAC-----ATCATAGAGTCTGGC---------GAAGT--GAGCATCT----TGATTAGAAGC 1173
Query 1015 --GTTATGGATGTACAAGCATTCGAGAGGCTTCTGGGGCCCTGCATGGACATCATGAAGAGGAACATCTCACAC 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 AGGTTATGGATGTACAAGCATTCGAGAGGCTTCTGGGGCCCTGCATGGACATCATGAAGAGGAACATCTCACAC 1247
Query 1087 TATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAG-------------- 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 TATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGCATGGGGAATC 1321
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1322 AAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCACATTGTCCACATCAGGCAAGCCCTGCACTGACG 1395
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1396 GTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTCAAT 1469
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1470 GAATTAGAGCTCATGCCCCTTTTCTGGCTTTGCTGTTGATTTTGGATGGTAGAGAATATTCCTGAGAGCCTTCC 1543
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1544 TTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATGTGCTATT 1617
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1618 GTCCTGTTAGTCAATAGTCTTCATATATAATTGTGTTACATATATTGCTGTAGACTCTCAGAAATCAGGGTAGA 1691
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1692 GCTTTTCCTTTGAGCAGTTTAATGAGTGAATTCAGCAGCAAAGTCGCAAGAAATGGTTCTCCAGCCAGGAGAGG 1765
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1766 TTATGTTTATCCTCTGATTGCCCGTTTTCTCTGCACACAGTGATATCGTATTCAGTGAGAGGTGCTGTTGGCAC 1839
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1840 CCAGCAGCACCCTGGGCACACAGCATTTCATGTCATGTCACAGTGTACAAGCTACCCTCTAATTCAGAAAGAAG 1913
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1914 AGCATTTTGCACAGAGAAAAATAAAAAGATCCATGAATGTCATCTTTTATCTTTTATTTTCAGTTGGCTGATGT 1987
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 1988 TGGAATTTTTGTTCTTGTCATGAACTTGTAAACCAATCTTGCCAAGATACAAGTTGTTTTGGTTTTTCACTACA 2061
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2062 ATGACCTCTTGTTCCTCCTGTCTTGACTGCTGACGTTCCTCAATGATTCTATTGTCTATTTTATGGGAAGCAGC 2135
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2136 CTTCCCATAGGTTTCCTTTTACACACTGCAGGGCTATCTTTATACTTTAAAAAAAAAAAAAAAAAAAAAAAAAA 2209
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2210 GGACAAGAACTGTCACTAACCTCATGGAGGGGTTTGCGTAAAACCATTTAGCCCACCTTGAGCAAAGGGTAGAT 2283
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2284 TCCGTGTTGTTTTTTTAAGCTCACTGTAATAAAATAAATCTAATTCAGCATTATTGTGCTACCTCAAAGGTAAA 2357
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2358 AAATGTTTTAAGGTCTTCTTTTGGTCCTGAGTTCTATATACAGTGTTTGAAATGTCCTTCATTTGGAATTATTT 2431
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2432 TTTAAATTCTTGGAGTGAATTTTATTTTAATCTGTTTTAATCTTGTATTTTAATCTCAGAAGAATAAGTGATTG 2505
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2506 AAACGTGATCAATTCTTGCTCTGTGGTGTTAAACATATAATGAACAGTCATTAAGAATTAAGTCACTGTTTGCC 2579
Query 1147 -------------------------------------------------------------------------- 1146
Sbjct 2580 ATAAACAAGGTTGATGTTCTTTTTGTTGTTGTTAAGGAAACCCTAGGGCTCGGCTTTACTCTTGATTAATAAAG 2653
Query 1147 -------------- 1146
Sbjct 2654 GCTGACAAATCATG 2667
