Nucleotide Global Alignment
Description
- Query:
- TRCN0000492269
- Subject:
- XM_017002110.1
- Aligned Length:
- 1479
- Identities:
- 956
- Gaps:
- 465
Alignment
Query 1 ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA 74
Query 75 TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCA------------------------------ 118
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAGTAAGTATAGTCACTCTAGCTCACCCCAGG 148
Query 119 ---------------ATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGG 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGAAGCCTGTTGCAGATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGG 222
Query 178 TTGGGCTTCCTCCTGAATCTGGACTCTAAACT------------------------------------------ 209
||||||||||||||||||||||||||||||||
Sbjct 223 TTGGGCTTCCTCCTGAATCTGGACTCTAAACTCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTG 296
Query 210 -------------------------------------------------------------------------- 209
Sbjct 297 CATATTGGAATCACCTGGAGAGCCTAAAAAATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCAC 370
Query 210 ----------------------------------------------GCCTGCTGAATTAGCCACCAAGTACGCA 237
||||||||||||||||||||||||||||
Sbjct 371 TGAGCGAGGACACAGCCTTTGCATTAGGATTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCA 444
Query 238 AACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAA 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAA 518
Query 312 GCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGA 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGA 592
Query 386 TCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC 666
Query 460 AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAAT 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAAT 740
Query 534 TGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAA 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAA 814
Query 608 CGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTC 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTC 888
Query 682 CTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATCGGA 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.||
Sbjct 889 CTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTG-GTCCA----- 956
Query 756 TGGCTTCTGGA--AATCTGTG------GCCACTCGAGTGC-CCAAGG--AGCCCCCTGAGATTCGAATCCTCAA 818
.|||.|| |.||..|| ||||...|||.|| .||||| || ||.|| |.|
Sbjct 957 ----CTCTAGAACAGTCGATGGAGAGAGCCAGGAGAGAGCAGCAAGGGAAG-----TGGGA---GCA------- 1011
Query 819 CCCATATTTCATCCAGGAGGCC--------------GCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCT 878
|||||||.| ||...|| |||| ||.||||.|||.| || ||
Sbjct 1012 -------------CAGGAGGGCAGACAGGAGAGAGGGCAGGCA-CCTC-----CCAGCCCCTCAGC--TG--CT 1062
Query 879 CATGGGCCG--GGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGG- 949
||.| .|||| ||||| ||||| ||.|||.|||| ||
Sbjct 1063 -----GCAGATAGGGA--------------GGCAG---GGCAG-----------CTGCACTGCTG------GGT 1097
Query 950 --------TGGCAGTCGCAGGA------TTTGGCTATGACATGAGCACACCCAACGCACC------------CC 997
||| |.||||| |..||| .|||..||||||||||..|||.| ||
Sbjct 1098 CTTCTTATTGG----CCCAGGAGCCCCCTCAGGC---CACAGCAGCACACCCACAGCATCCCACATCCTGTGCC 1164
Query 998 TGCACTACTATGAGACCGTTCGCA------------------TGGCAG---------------------CCATC 1032
|||.|.|| ||..||.||||.| ||| || |||||
Sbjct 1165 TGCCCGAC---GACTCCCTTCGTATCCTCCTCTGTTACACACTGG-AGCCCCACCACACGCTCTCTTCACCATC 1234
Query 1033 AAAGA--------GTCCTGGACGCACA----ATATCCAGCGAGAGAAAGA----GTTTCTGCGGA----AG--- 1083
| ||||..|.|.|||| ||.||| |.|.|.|.||| .||.||.| | ||
Sbjct 1235 ----ATTCCCCTTGTCCCTGTCACACACTCCATTTCC--CCAAACACAGATGGGCTTCCTAC--ACCACAGGCC 1300
Query 1084 CTGG--------TGAAA--------GCTCGCGTCATCACTGAT--CTAAGCAGTGGCATC------------- 1125
|||| |.||| ||||.|| |.|||||| | ||| ..|||..||
Sbjct 1301 CTGGGTTCCCCATTAAACGCCTCATGCTCCCG-CCTCACTG-TCCCTA---CTTGGGGTCCCTGCCACTCCCC 1368
