Nucleotide Global Alignment

Description

Query:
TRCN0000492269
Subject:
XR_001737368.1
Aligned Length:
1783
Identities:
974
Gaps:
743

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCGCCGCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTGTCGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCC  148

Query    1  ---------------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCT  29
                                                         |||||||||||||||||||||||||||||
Sbjct  149  TCCCTCTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCT  222

Query   30  GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT  296

Query  104  GGGAGGAGGACTCCA---------------------------------------------ATTCAGTGGTTCTT  132
            |||||||||||||||                                             ||||||||||||||
Sbjct  297  GGGAGGAGGACTCCAGTAAGTATAGTCACTCTAGCTCACCCCAGGAGAAGCCTGTTGCAGATTCAGTGGTTCTT  370

Query  133  TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA  444

Query  207  ACT-----------------------------------------------------------------------  209
            |||                                                                       
Sbjct  445  ACTCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAATCACCTGGAGAGCCTAAAA  518

Query  210  --------------------------------------------------------------------------  209
                                                                                      
Sbjct  519  AATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTAGGA  592

Query  210  -----------------GCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG  266
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG  666

Query  267  CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT  740

Query  341  TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC  414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC  814

Query  415  ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT  488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT  888

Query  489  GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA  962

Query  563  ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC  636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC  1036

Query  637  GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA  710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA  1110

Query  711  GTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATC--------GGATGGC----TTCTGGAAATCTG  772
            ||||||||||||||||||||||||||||||||||     .||        |.|.|||    |.|.||    |.|
Sbjct 1111  GTGGTTGAAATACATCGTCTACAAGGAGAGAGTG-----CTCTTTCCCAAGCAAGGCCAAGTACAGG----CAG  1175

Query  773  TGGCCACTCG--AGTGCCCAAGGAGCCCCCTGAGATTCGAA-------------TCCTCAACCCATATTTCATC  831
            ||.|.|.|.|  ||    ||||      |..||||   |||             |||..||          ||.
Sbjct 1176  TGTCAAGTAGGTAG----CAAG------CAAGAGA---GAAGACAGAAGTCAGGTCCAGAA----------ATT  1226

Query  832  CAGGAGG------------CCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAA  893
            |||||.|            |||||           |||||||.||||                |||.|..||.|
Sbjct 1227  CAGGAAGCTGAGGAGCTCTCCGCC-----------TGGCCTGGCCTT----------------GGCAGCAGGCA  1273

Query  894  CAT---------------------CCCTAC----CCTTGGCAGTGT--GGCAGT------GAC----------C  924
            .||                     |.||||    |.|||| |||||  .|||||      |||          .
Sbjct 1274  GATTCAAGTTTTATGTTTCAGTTACTCTACTGGGCTTTGG-AGTGTTCAGCAGTCAAAAAGACAGACACTGTAA  1346

Query  925  ATGG-----CACTACA------CGG----------------------CTGTGACGAGGTGGCAGTCGCAGGATT  965
            ||||     ||.||.|      |.|                      ||| ||.|.|||||||||   |||.||
Sbjct 1347  ATGGCCAGTCATTAGAATAGTCCAGATGAAAGATGATAAGACCTGCCCTG-GAAGTGGTGGCAGT---AGGTTT  1416

Query  966  TGGCT-ATGACATG----------------AGCACA-----CCCAAC----------GCACCCC---------T  998
            .||.| |.|..|||                ||||.|     .|.|||          |||.|.|         |
Sbjct 1417  GGGATCAAGGGATGGATCTGTACCGTTCTAAGCAGATAGACTCGAACTTGATGACCAGCAGCACAAGGTAAGAT  1490

Query  999  GCACT-------ACTATGAGA---------CCGTTCGCA--TGGCAGCCATCAAAGAGTCCTGGACGCACAAT-  1053
            |.|||       ..||.||||         |.||||.||  |.||.|...|..||||   |||||.|.|||.| 
Sbjct 1491  GGACTGGAAAGGTGTAGGAGAATCTCAAGTCAGTTCCCAGGTTGCTGGTTTGGAAGA---CTGGATGGACAGTA  1561

Query 1054  ----ATCCAGCGA-----GAGAAAGAGTTTCTGCGGAAG----CTGGTGAAAGCTCGCGTCATCACT---GATC  1111
                ||  ||.||     |||||           |||||    |||| ||||.||.|   .|.||.|   |||.
Sbjct 1562  GAGGAT--AGGGAACAAGGAGAA-----------GGAAGAGGTCTGG-GAAAACTAG---AAACAATTTAGATA  1618

Query 1112  T-----AAGCAGTG--------------------GCATC-----------------------------------  1125
            |     || |||||                    .||||                                   
Sbjct 1619  TCCAACAA-CAGTGTTGGTTACATACATTATGGTACATCCATAAGACAAAATTCCTTTTTTTTTGAGACAGGAC  1691

Query 1126  -------  1125
                   
Sbjct 1692  CTTTCTC  1698

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