Nucleotide Global Alignment

Description

Query:
TRCN0000492269
Subject:
XR_946742.2
Aligned Length:
1876
Identities:
991
Gaps:
824

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCGCCGCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTGTCGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCC  148

Query    1  ---------------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCT  29
                                                         |||||||||||||||||||||||||||||
Sbjct  149  TCCCTCTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCT  222

Query   30  GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT  296

Query  104  GGGAGGAGGACTCCA---------------------------------------------ATTCAGTGGTTCTT  132
            |||||||||||||||                                             ||||||||||||||
Sbjct  297  GGGAGGAGGACTCCAGTAAGTATAGTCACTCTAGCTCACCCCAGGAGAAGCCTGTTGCAGATTCAGTGGTTCTT  370

Query  133  TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA  444

Query  207  ACT-----------------------------------------------------------------------  209
            |||                                                                       
Sbjct  445  ACTCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAATCACCTGGAGAGCCTAAAA  518

Query  210  --------------------------------------------------------------------------  209
                                                                                      
Sbjct  519  AATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTAGGA  592

Query  210  -----------------GCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG  266
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG  666

Query  267  CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT  740

Query  341  TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC  414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC  814

Query  415  ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT  488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT  888

Query  489  GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA  962

Query  563  ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC  636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC  1036

Query  637  GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA  710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA  1110

Query  711  GTGGTTGAAATACATCGTCTACAAGGAGAGAGTG--------------------AGTGCA------------TC  752
            ||||||||||||||||||||||||||||||||||                    |||.||            |.
Sbjct 1111  GTGGTTGAAATACATCGTCTACAAGGAGAGAGTGCTCTTTCCCAAGCAAGGCCAAGTACAGGCAGTGTCAAGTA  1184

Query  753  GGATGGC-------------------------TTCTGGAAATCTGTGGCCACTC---GAGTGCCCAAGG-----  793
            || |.||                         .||..|||||          ||   ||||    ||||     
Sbjct 1185  GG-TAGCAAGCAAGAGAGAAGACAGAAGTCAGGTCCAGAAAT----------TCAGGGAGT----AAGGAAAGA  1243

Query  794  -----------------AGCCCCCTGAGATTC---GAATCCTCA----ACCCA---TA----------------  824
                             ||||..|| |||.||   |||  ||||    ||.||   ||                
Sbjct 1244  AAGAAGAAAAGGAAGGAAGCCAGCT-AGAGTCGGAGAA--CTCACTATACTCAGGCTACTCAGGAAGCAGACAG  1314

Query  825  ------------TTTCATCCAGGAGG------------CCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATG  874
                        ||||  ||||||.|            |||||           |||||||.||||        
Sbjct 1315  CAGGGCCTTGCTTTTC--CCAGGAAGCTGAGGAGCTCTCCGCC-----------TGGCCTGGCCTT--------  1367

Query  875  GCCTCATGGGCCGGGGGAACAT---------------------CCCTAC----CCTTGGCAGTGT--GGCAGT-  920
                    |||.|..||.|.||                     |.||||    |.|||| |||||  .||||| 
Sbjct 1368  --------GGCAGCAGGCAGATTCAAGTTTTATGTTTCAGTTACTCTACTGGGCTTTGG-AGTGTTCAGCAGTC  1432

Query  921  -----GAC----------CATGG-----CACTACA------CGG----------------------CTGTGACG  946
                 |||          .||||     ||.||.|      |.|                      ||| ||.|
Sbjct 1433  AAAAAGACAGACACTGTAAATGGCCAGTCATTAGAATAGTCCAGATGAAAGATGATAAGACCTGCCCTG-GAAG  1505

Query  947  AGGTGGCAGTCGCAGGATTTGGCT-ATGACATG----------------AGCACA-----CCCAAC--------  990
            .|||||||||   |||.||.||.| |.|..|||                ||||.|     .|.|||        
Sbjct 1506  TGGTGGCAGT---AGGTTTGGGATCAAGGGATGGATCTGTACCGTTCTAAGCAGATAGACTCGAACTTGATGAC  1576

Query  991  --GCACCCC---------TGCACT-------ACTATGAGA---------CCGTTCGCA--TGGCAGCCATCAAA  1035
              |||.|.|         ||.|||       ..||.||||         |.||||.||  |.||.|...|..||
Sbjct 1577  CAGCAGCACAAGGTAAGATGGACTGGAAAGGTGTAGGAGAATCTCAAGTCAGTTCCCAGGTTGCTGGTTTGGAA  1650

Query 1036  GAGTCCTGGACGCACAAT-----ATCCAGCGA-----GAGAAAGAGTTTCTGCGGAAG----CTGGTGAAAGCT  1095
            ||   |||||.|.|||.|     ||  ||.||     |||||           |||||    |||| ||||.||
Sbjct 1651  GA---CTGGATGGACAGTAGAGGAT--AGGGAACAAGGAGAA-----------GGAAGAGGTCTGG-GAAAACT  1707

Query 1096  CGCGTCATCACT---GATCT-----AAGCAGTG--------------------GCATC----------------  1125
            .|   .|.||.|   |||.|     || |||||                    .||||                
Sbjct 1708  AG---AAACAATTTAGATATCCAACAA-CAGTGTTGGTTACATACATTATGGTACATCCATAAGACAAAATTCC  1777

Query 1126  --------------------------  1125
                                      
Sbjct 1778  TTTTTTTTTGAGACAGGACCTTTCTC  1803

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