Nucleotide Global Alignment
Description
- Query:
- TRCN0000492269
- Subject:
- XR_946743.2
- Aligned Length:
- 1643
- Identities:
- 904
- Gaps:
- 691
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGCCGCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGTCGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCC 148
Query 1 ---------------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCT 29
|||||||||||||||||||||||||||||
Sbjct 149 TCCCTCTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCT 222
Query 30 GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT 296
Query 104 GGGAGGAGGACTCCA---------------------------------------------ATTCAGTGGTTCTT 132
||||||||||||||| ||||||||||||||
Sbjct 297 GGGAGGAGGACTCCAGTAAGTATAGTCACTCTAGCTCACCCCAGGAGAAGCCTGTTGCAGATTCAGTGGTTCTT 370
Query 133 TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA 444
Query 207 ACT----------------------------------------------------------------------- 209
|||
Sbjct 445 ACTCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAATCACCTGGAGAGCCTAAAA 518
Query 210 -------------------------------------------------------------------------- 209
Sbjct 519 AATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTAGGA 592
Query 210 -----------------GCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG 666
Query 267 CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT 740
Query 341 TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC 814
Query 415 ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT 888
Query 489 GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA 962
Query 563 ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC 1036
Query 637 GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA 1110
Query 711 GTGGTTGAAATACATCGTCTACAAGGAGAGAGTG--------------------AGTGCA------------TC 752
|||||||||||||||||||||||||||||||||| |||.|| |.
Sbjct 1111 GTGGTTGAAATACATCGTCTACAAGGAGAGAGTGCTCTTTCCCAAGCAAGGCCAAGTACAGGCAGTGTCAAGTA 1184
Query 753 GGATGGC-------------------------TTCTGGAAATCTGTGGCCACTC---GAGTGCCCAAGG----- 793
|| |.|| .||..||||| || |||| ||||
Sbjct 1185 GG-TAGCAAGCAAGAGAGAAGACAGAAGTCAGGTCCAGAAAT----------TCAGGGAGT----AAGGAAAGA 1243
Query 794 -----------------AGCCCCCTGAGATTC---GAATCCTCA----ACCCA---TATTTCATCCAGGAGGCC 840
||||..|| |||.|| ||| |||| ||.|| ||.| |||||.||.
Sbjct 1244 AAGAAGAAAAGGAAGGAAGCCAGCT-AGAGTCGGAGAA--CTCACTATACTCAGGCTACT-----CAGGAAGCA 1309
Query 841 GCCTTCACCCTCATTGGCCTGCCCTT---CAACAATGGC-------CTCATGGGCCGGGGGAACATCCCTACCC 904
|.|..|| .|||||..|.|| ||..|| || ||| |..|||.|| |||..||
Sbjct 1310 GACAGCA-------GGGCCTTGCTTTTCCCAGGAA--GCTGAGGAGCTC-TCCGCCTGG--------CCTGGCC 1365
Query 905 TTGGCAGTGTGGCAG--TGACCATGG--CACT-----ACA--CGGCTGTGA---CGAGGTGGCAGTCGCA--GG 962
||||||| ..||||| | ||.|| |||| ||| ||...|.|| |.|||.|..||..||| ||
Sbjct 1366 TTGGCAG-CAGGCAGATT---CAAGGTCCACTCTAGAACAGTCGATGGAGAGAGCCAGGAGAGAGCAGCAAGGG 1435
Query 963 ATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAG 1036
|..||| ||||||| |.|.|||||.||..|.||
Sbjct 1436 AAGTGG---------GAGCACA----------------------------------GGAGGGCAGACAGGAGAG 1466
Query 1037 AGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGAT 1110
|| ||
Sbjct 1467 AG----GG------------------------------------------------------------------ 1470
Query 1111 CTAAGCAGTGGCATC 1125
Sbjct 1471 --------------- 1470
