Nucleotide Global Alignment

Description

Query:
TRCN0000492309
Subject:
NM_172962.1
Aligned Length:
2746
Identities:
2295
Gaps:
130

Alignment

Query    1  ATGGGACCAGAGGCCCTGTCATCTTTACTGCTGCTG---CTCTTGGTGGCAAGTGGAGATGCTGACATGAAGGG  71
            |||||..|||.|.||||.||||||.|||||||||||   |||||||||.|||.|||||||||||||||||||||
Sbjct    1  ATGGGGACAGGGACCCTCTCATCTCTACTGCTGCTGCTACTCTTGGTGACAATTGGAGATGCTGACATGAAGGG  74

Query   72  ACATTTTGATCCTGCCAAGTGCCGCTATGCCCTGGGCATGCAGGACCGGACCATCCCAGACAGTGACATCTCTG  145
            |||||||||.||||||||||||||||||||||||||||||||||||||.|||||.||.|||||.||.|||||||
Sbjct   75  ACATTTTGACCCTGCCAAGTGCCGCTATGCCCTGGGCATGCAGGACCGCACCATTCCTGACAGCGATATCTCTG  148

Query  146  CTTCCAGCTCCTGGTCAGATTCCACTGCCGCCCGCCACAGCAGGTTGGAGAGCAGTGACGGGGATGGGGCCTGG  219
            ..||||||||||||||.||.||.||.||.|||||||||||||||.||||.||||||||.||.||||||||.|||
Sbjct  149  TGTCCAGCTCCTGGTCGGACTCTACCGCTGCCCGCCACAGCAGGCTGGAAAGCAGTGATGGAGATGGGGCTTGG  222

Query  220  TGCCCCGCAGGGTCGGTGTTTCCCAAGGAGGAGGAGTACTTGCAGGTGGATCTACAACGACTCCACCTGGTGGC  293
            |||||.||||||.|.|||||.|||||.||.||||||||||||||||||||.||.|...|.||.|||||||||||
Sbjct  223  TGCCCTGCAGGGCCTGTGTTCCCCAAAGAAGAGGAGTACTTGCAGGTGGACCTTCGTAGGCTACACCTGGTGGC  296

Query  294  TCTGGTGGGCACCCAGGGACGGCATGCCGGGGGCCTGGGCAAGGAGTTCTCCCGGAGCTACCGGCTGCGTTACT  367
            ||||||||||||||||||.||.|||||.|||||.||||||||.|||||||||||.|||||.|||.|||||||||
Sbjct  297  TCTGGTGGGCACCCAGGGCCGCCATGCTGGGGGTCTGGGCAAAGAGTTCTCCCGAAGCTATCGGTTGCGTTACT  370

Query  368  CCCGGGATGGTCGCCGCTGGATGGGCTGGAAGGACCGCTGGGGTCAGGAGGTGATCTCAGGCAATGAGGACCCT  441
            ||||.|||||.|||||||||||||.||||||||||||||||||.|||||||||||.||.||.||.|||||.||.
Sbjct  371  CCCGAGATGGCCGCCGCTGGATGGACTGGAAGGACCGCTGGGGACAGGAGGTGATTTCGGGTAACGAGGATCCC  444

Query  442  GAGGGAGTGGTGCTGAAGGACCTTGGGCCCCCCATGGTTGCCCGACTGGTTCGCTTCTACCCCCGGGCTGACCG  515
            |.||||||.|||||||||||||||||||||||||||||.|||||.|||||.||||||||||||.||||||||||
Sbjct  445  GGGGGAGTAGTGCTGAAGGACCTTGGGCCCCCCATGGTGGCCCGGCTGGTCCGCTTCTACCCCAGGGCTGACCG  518

Query  516  GGTCATGAGTGTCTGTCTGCGGGTAGAGCTCTATGGCTGCCTCTGGAGGGATGGACTCCTGTCTTACACCGCCC  589
            ||||||||||||||||||.|||||.|||||||||||||||||||||.||||||||||||||||.||.||.||||
Sbjct  519  GGTCATGAGTGTCTGTCTTCGGGTGGAGCTCTATGGCTGCCTCTGGCGGGATGGACTCCTGTCATATACAGCCC  592

Query  590  CTGTGGGGCAGACAATGTATTTATCTGAGGCCGT-GTAC--CTCAACGACTCCACCTATGACGGACATACCGTG  660
            |.|||||||||||.|||.|.||||||||||...| ||||  |||||.||.|||||.||.||.|||.||||.|..
Sbjct  593  CCGTGGGGCAGACCATGCAGTTATCTGAGGTGATGGTACATCTCAATGATTCCACTTACGATGGATATACTGCT  666

Query  661  GGCGGACTGCAGTATGGGGGTCTGGGCCAGCTGGCAGATGGTGTGGTGGGGCTGGATGACTTTAGGAAGAGTCA  734
            ||.||.|||||||||||.|||||||||||||||||||||||.||||||||.||||||||.||.|||.||||.||
Sbjct  667  GGAGGGCTGCAGTATGGCGGTCTGGGCCAGCTGGCAGATGGCGTGGTGGGCCTGGATGATTTCAGGCAGAGCCA  740

Query  735  GGAGCTGCGGGTCTGGCCAGGCTATGACTATGTGGGATGGAGCAACCACAGCTTCTCCAGTGGCTATGTGGAGA  808
            |||||||||||||||||||||||||||||||||||||||||||||.||.||||||.|||..|||||.|||||||
Sbjct  741  GGAGCTGCGGGTCTGGCCAGGCTATGACTATGTGGGATGGAGCAATCAGAGCTTCCCCACGGGCTACGTGGAGA  814

Query  809  TGGAGTTTGAGTTTGACCGGCTGAGGGCCTTCCAGGCTATGCAGGTCCACTGTAACAACATGCACACGCTGGGA  882
            ||||||||||||||||.|||.|||||.||||||||.|.|||||||||||||||||||||||||||||.||||||
Sbjct  815  TGGAGTTTGAGTTTGATCGGTTGAGGACCTTCCAGACCATGCAGGTCCACTGTAACAACATGCACACTCTGGGA  888

Query  883  GCCCGTCTGCCTGGCGGGGTGGAATGTCGCTTCCGGCGTGGCCCTGCCATGGCCTGGGAGGGGGAGCCCATGCG  956
            |||||.||.||.||||||||||||||.||.||.....|.||.||.||||||||||||||.||.|||||..|.||
Sbjct  889  GCCCGCCTACCAGGCGGGGTGGAATGCCGGTTTAAAAGGGGTCCCGCCATGGCCTGGGAAGGAGAGCCTGTCCG  962

Query  957  CCACAACCTAGGGGGCAACCTGGGGGACCCCAGAGCCCGGGCTGTCTCAGTGCCCCTTGGCGGCCGTGTGGCTC  1030
            |||....||.||.||||.|||.||.|||||||||||||||||..|||||||||||||.||.||||..||||..|
Sbjct  963  CCATGCTCTGGGAGGCAGCCTTGGAGACCCCAGAGCCCGGGCCATCTCAGTGCCCCTGGGTGGCCACGTGGGCC  1036

Query 1031  GCTTTCTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACTCTTCAGCGAAATCTCCTTCATCTCTGATGTG  1104
            ||||||||||||||.|.|||||||||||.||.||.||||||||||||||.||.|||||.||||||||.||||||
Sbjct 1037  GCTTTCTGCAGTGCAGATTCCTCTTTGCAGGTCCTTGGTTACTCTTCAGTGAGATCTCTTTCATCTCAGATGTG  1110

Query 1105  GTGAACAATTCCTCTCCGGCACTGGGAGGCACCTTCCCGCCAGCCCCCTGGTGGCCGCCTGGCCCACCTCCCAC  1178
            ||||||.|.||||||            |.|||||||||.|||||||||||||||||.||||||||.||||||||
Sbjct 1111  GTGAACGACTCCTCT------------GACACCTTCCCACCAGCCCCCTGGTGGCCACCTGGCCCGCCTCCCAC  1172

Query 1179  CAACTTCAGCAGCTTGGAGCTGGAGCCCAGAGGCCAGCAGCCCGTGGCCAAGGCCGAGGGGAGCCCGACCGCCA  1252
            ||||||||||||||||||||||||||||.|.||.||.|||||.|||||||||||.|||||||||||.||.||||
Sbjct 1173  CAACTTCAGCAGCTTGGAGCTGGAGCCCCGGGGTCAACAGCCAGTGGCCAAGGCGGAGGGGAGCCCAACTGCCA  1246

Query 1253  TCCTCATCGGCTGCCTGGTGGCCATCATCCTGCTCCTGCTGCTCATCATTGCCCTCATGCTCTGGCGGCTGCAC  1326
            |||||||.||||||||||||||||||||||||||.|||||.||||||||.||.||.|||||||||.||||||||
Sbjct 1247  TCCTCATTGGCTGCCTGGTGGCCATCATCCTGCTGCTGCTTCTCATCATCGCGCTGATGCTCTGGAGGCTGCAC  1320

Query 1327  TGGCGCAGGCTCCTCAGCAAGGCTGAACGGAGGGTGTTGGAAGAGGAGCTGACGGTTCACCTCTCTGTCCCTGG  1400
            ||||||.||||.||||||||||||||.||..|.||||||||.||||||||||||||||||||.|||||||||||
Sbjct 1321  TGGCGCCGGCTGCTCAGCAAGGCTGAGCGCCGCGTGTTGGAGGAGGAGCTGACGGTTCACCTTTCTGTCCCTGG  1394

Query 1401  GGACACTATCCTCATCAACAACCGCCCAGGTCCTAGAGAGCCACCCCCGTACCAGGAGCCCCGGCCTCGTGGGA  1474
            ||||||.|||||||||||||||||||||||.||..|||||||||||||.||||||||||||||||||||.||||
Sbjct 1395  GGACACCATCCTCATCAACAACCGCCCAGGACCCCGAGAGCCACCCCCTTACCAGGAGCCCCGGCCTCGGGGGA  1468

Query 1475  ATCCGCCCCACTCCGCTCCCTGTGTCCCCAATGGCTCTGCGTTGCTGCTCTCCAATCCAGCCTACCGCCTCCTT  1548
            .|||.|||||.||.||.|||||.||||||||.||||||                                    
Sbjct 1469  CTCCACCCCATTCTGCACCCTGCGTCCCCAACGGCTCT------------------------------------  1506

Query 1549  CTGGCCACTTACGCCCGTCCCCCTCGAGGCCCGGGCCCCCCCACACCCGCCTGGGCCAAACCCACCAACACCCA  1622
                                                                                      
Sbjct 1507  --------------------------------------------------------------------------  1506

Query 1623  GGCCTACAGTGGGGACTATATGGAGCCTGAGAAGCCAGGCGCCCCGCTTCTGCCCCCACCTCCCCAGAACAGCG  1696
             ||||.|||||||||||||||||||||.||||||||.||.|||||||||||.||||||||||||||||||||||
Sbjct 1507  -GCCTGCAGTGGGGACTATATGGAGCCCGAGAAGCCGGGTGCCCCGCTTCTACCCCCACCTCCCCAGAACAGCG  1579

Query 1697  TCCCCCATTATGCCGAGGCTGACATTGTTACCCTGCAGGGCGTCACCGGGGGCAACACCTATGCTGTGCCTGCA  1770
            ||||||||||||||||.|||||||||||.|||||||||||||||||.||||||||||||||.||||||||||||
Sbjct 1580  TCCCCCATTATGCCGAAGCTGACATTGTCACCCTGCAGGGCGTCACTGGGGGCAACACCTACGCTGTGCCTGCA  1653

Query 1771  CTGCCCCCAGGGGCAGTCGGGGATGGGCCCCCCAGAGTGGATTTCCCTCGATCTCGACTCCGCTTCAAGGAGAA  1844
            ||||||||||||||.||.||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||
Sbjct 1654  CTGCCCCCAGGGGCGGTTGGGGATGGGCCCCCCAGAGTGGATTTCCCTCGGTCACGGCTCCGCTTCAAGGAGAA  1727

Query 1845  GCTTGGCGAGGGCCAGTTTGGGGAGGTGCACCTGTGTGAGGTCGACAGCCCTCAAGATCTGGTCAGTCTTGATT  1918
            |||||||||||||||.|||||||||||.|||||||||||.||.||...|||.|||||||||||||||..|||.|
Sbjct 1728  GCTTGGCGAGGGCCAATTTGGGGAGGTACACCTGTGTGAAGTAGAGGACCCGCAAGATCTGGTCAGTAGTGACT  1801

Query 1919  TCCCCCTTAATGTGCGTAAGGGACACCCTTTGCTGGTAGCTGTCAAGATCTTACGGCCAGATGCCACCAAGAAT  1992
            ||||..|.|.|||||..|||||||||||.|||||||||||.||.||||||.|.|||||||||||||||||.|||
Sbjct 1802  TCCCTATCAGTGTGCACAAGGGACACCCCTTGCTGGTAGCAGTGAAGATCCTCCGGCCAGATGCCACCAAAAAT  1875

Query 1993  GCCAGGAATGATTTCCTGAAAGAGGTGAAGATCATGTCGAGGCTCAAGGACCCAAACATCATTCGGCTGCTGGG  2066
            ||||||||||||||||||||.|||||.|||||||||||..||||.|||||||||||||||||.|||||.|||||
Sbjct 1876  GCCAGGAATGATTTCCTGAAGGAGGTAAAGATCATGTCACGGCTGAAGGACCCAAACATCATCCGGCTCCTGGG  1949

Query 2067  CGTGTGTGTGCAGGACGACCCCCTCTGCATGATTACTGACTACATGGAGAACGGCGACCTCAACCAGTTCCTCA  2140
            .||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||.||.|||||||||||||
Sbjct 1950  TGTGTGTGTGCAGGATGACCCCCTCTGCATGATCACAGACTACATGGAGAACGGCGATCTGAACCAGTTCCTCA  2023

Query 2141  GTGCCCACCAGCTGGAGGACAAGGCAGCCGAGGGGGCCCCTGGGGACGGGCAGGCTGCGCAGGGGCCCACCATC  2214
            ||||||.||||||||||.|||||||..|..|||||..|.||||||||....||.|||..|||||||||||.|||
Sbjct 2024  GTGCCCGCCAGCTGGAGAACAAGGCCACTCAGGGGCTCTCTGGGGACACAGAGTCTGACCAGGGGCCCACAATC  2097

Query 2215  AGCTACCCAATGCTGCTGCATGTGGCAGCCCAGATCGCCTCCGGCATGCGCTATCTGGCCACACTCAACTTTGT  2288
            ||||||||.||||||.|.||.||||..||||||||||||||.||||||||.|||||.|||||.||.||||||||
Sbjct 2098  AGCTACCCTATGCTGTTACACGTGGGGGCCCAGATCGCCTCTGGCATGCGTTATCTCGCCACGCTGAACTTTGT  2171

Query 2289  ACATCGGGACCTGGCCACGCGGAACTGCCTAGTTGGGGAAAATTTCACCATCAAAATCGCAGACTTTGGCATGA  2362
            .|||||||||||||||||.|||||||||.|.|||||||||||||||||||||||||||||.|||||||||||||
Sbjct 2172  GCATCGGGACCTGGCCACCCGGAACTGCTTGGTTGGGGAAAATTTCACCATCAAAATCGCCGACTTTGGCATGA  2245

Query 2363  GCCGGAACCTCTATGCTGGGGACTATTACCGTGTGCAGGGCCGGGCAGTGCTGCCCATCCGCTGGATGGCCTGG  2436
            |||||||.|||||.||||||||.|||||||||||.|||||||||||.||||||||||||.|.||||||||.|||
Sbjct 2246  GCCGGAATCTCTACGCTGGGGATTATTACCGTGTCCAGGGCCGGGCGGTGCTGCCCATCAGGTGGATGGCTTGG  2319

Query 2437  GAGTGCATCCTCATGGGGAAGTTCACGACTGCGAGTGACGTGTGGGCCTTTGGTGTGACCCTGTGGGAGGTGCT  2510
            ||||||||.|||||||||||||||||.||.||.||||||||.||||||||.||.||||||||||||||||||||
Sbjct 2320  GAGTGCATTCTCATGGGGAAGTTCACAACAGCCAGTGACGTTTGGGCCTTCGGAGTGACCCTGTGGGAGGTGCT  2393

Query 2511  GATGCTCTGTAGGGCCCAGCCCTTTGGGCAGCTCACCGACGAGCAGGTCATCGAGAACGCGGGGGAGTTCTTCC  2584
            |||||||||.|||.|||||||||||||||||||.||.||.||||||||.||||||||.||.||.|||||||||.
Sbjct 2394  GATGCTCTGCAGGTCCCAGCCCTTTGGGCAGCTTACAGATGAGCAGGTTATCGAGAATGCCGGCGAGTTCTTCA  2467

Query 2585  GGGACCAGGGCCGGCAGGTGTACCTGTCCCGGCCGCCTGCCTGCCCGCAGGGCCTATATGAGCTGATGCTTCGG  2658
            |||||||||||||||||||.|||.|||||.||||.||.||||||||.|||..|||.||||||||||||||.|||
Sbjct 2468  GGGACCAGGGCCGGCAGGTCTACTTGTCCAGGCCACCCGCCTGCCCACAGACCCTGTATGAGCTGATGCTCCGG  2541

Query 2659  TGCTGGAGCCGGGAGTCTGAGCAGCGACCACCCTTTTCCCAGCTGCATCGGTTCCTGGCAGAGGATGCACTCAA  2732
            ||.||||||||||||.|.||||||||.||.|||||..|||||||.||||||||||||||.||.|||||.|||||
Sbjct 2542  TGTTGGAGCCGGGAGCCCGAGCAGCGGCCGCCCTTCGCCCAGCTTCATCGGTTCCTGGCGGATGATGCGCTCAA  2615

Query 2733  CACGGTGG  2740
            ||||||| 
Sbjct 2616  CACGGTG-  2622

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