Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00016
- Subject:
- XM_017021725.1
- Aligned Length:
- 3316
- Identities:
- 2184
- Gaps:
- 731
Alignment
Query 1 ATGGTGGACTACCACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGG 74
|||| |||.|||
Sbjct 1 ----------------------------------------------------------ATGG-GCTTGCG---- 11
Query 75 GGGCAGCATGGGCGACTACATGGCCCAGGAGGACGACTGGGACCGGGACCTGCTGCT-GGACCCGGCCTGGGAG 147
|||| |.|||||..|| .|||| ||.||||
Sbjct 12 ---------------CTAC---------------------------GTCCTGCCCCTCCGACC---CCCGGGA- 39
Query 148 AAGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGATCGAGAACAT 221
|||||.||||||||||||||.|||||||||||.||||||||.||.|||||||||||||||||
Sbjct 40 ------------AAGACATTCACGGCATGGTGTAACTCCCACCTCCGGAAGGCGGGGACACAGATCGAGAACAT 101
Query 222 TGATGAGGACTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGC 295
.||.|||||||||||.||.||.||.||||||||||||||.|||||||||||.|||||.||.||.||..|.||||
Sbjct 102 CGAAGAGGACTTCCGGGATGGCCTGAAGCTCATGCTGCTGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGC 175
Query 296 CGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGC 369
|.|||||.||.|||||||||||||||||.|||..|||.||.|||||.||.|||||.||.||.||||||||||||
Sbjct 176 CAGAGCGAGGCAAGATGAGAGTGCACAAGATCTCCAACGTCAACAAGGCCCTGGATTTCATAGCCAGCAAAGGC 249
Query 370 GTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAACGCAAAGATGACCCTGGGAATGATCTGGAC 443
|||||.|||||.||||||||.||.|||||.||.|||||.||.||.|..||||||||||||||.|||||||||||
Sbjct 250 GTCAAACTGGTGTCCATCGGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCATGATCTGGAC 323
Query 444 CATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTCTCTGGT 517
|||||||||..|.||.|||||||||||||||||||||||||||||.||.||||||||||||||.||.||.||||
Sbjct 324 CATCATCCTGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGAAGGGCTGCTCCTGTGGT 397
Query 518 GCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGATGGTCTTGCC 591
|.|||||||||||||||||.||.||.||.|||||..|.||||||||||||||.||||||||||||||.||.|.|
Sbjct 398 GTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTCCACATAAGCTGGAAGGATGGCCTCGGC 471
Query 592 TTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGACCCTGTCAC 665
|||..|||..||||||||||.|||.|.||.|||||||||||.||.|..||||||.|||||||.||.||..||||
Sbjct 472 TTCTGTGCTTTGATCCACCGACACCGGCCCGAGCTGATTGACTACGGGAAGCTGCGGAAGGATGATCCACTCAC 545
Query 666 CAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAGGACATCG 739
.||.|||||.|..||.||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||.|||||||
Sbjct 546 AAATCTGAATACGGCTTTTGACGTGGCAGAGAAGTACCTGGACATCCCCAAGATGCTGGATGCCGAAGACATCG 619
Query 740 T--GAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTCAGGAG 811
| || ||.|||||.||.||.|||||.|||||.|||||.||.|||||.|||||||||||.|||||.||.||||
Sbjct 620 TTGGA--ACTGCCCGACCGGATGAGAAAGCCATCATGACTTACGTGTCTAGCTTCTACCACGCCTTCTCTGGAG 691
Query 812 CGCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGGCTGTCAACCAAGAGAACGAGCACCTGATG 885
|.||||||||.||.||.||.|||||.||.|||||.||||||.||||.||||||||.|||||||||||.||.|||
Sbjct 692 CCCAGAAGGCGGAGACAGCAGCCAATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAGCTTATG 765
Query 886 GAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGT 959
||.||||||||||||||||||||.||.||..|||||||||||||.|||||.|||||.|||||||||.||||.||
Sbjct 766 GAAGACTACGAGAAGCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTGGAGAACCGGGT 839
Query 960 GCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGTGTGCACAAGCCGC 1033
||||.|.||.||.||.||.|..|||||.||||||||||||||||||||.|||||||||||..||||||||||||
Sbjct 840 GCCCGAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACTACCGGCGCCTGCACAAGCCGC 913
Query 1034 CCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGCCTCAGCAACCGG 1107
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 914 CCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGGCTCAGCAACCGG 987
Query 1108 CCCGCCTTCATGCCCTCCGAGGGCAAGATGGTCTCGGACATCAACAATGGCT--GGCAGCACTTGGAGCAGGCT 1179
||.||||||||||||||.|||||||.|||||||||||||||||||||||.|| |||.| |.|||||||||..
Sbjct 988 CCTGCCTTCATGCCCTCTGAGGGCAGGATGGTCTCGGACATCAACAATGCCTGGGGCTG--CCTGGAGCAGGTG 1059
Query 1180 GAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTT 1253
|||||||||||.|||||||||.||||||||||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct 1060 GAGAAGGGCTATGAGGAGTGGTTGCTGAATGAGATCCGGAGGCTGGAGCGACTGGACCACCTGGCAGAGAAGTT 1133
Query 1254 CCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGAC------------------------GGGAAGGAAGCCA 1303
||||||||||||||||||||||||||||||||||||| ||.||.||.||||
Sbjct 1134 CCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGCCATGTGGCCCTCTCTCAACCCAGGCAAAGAGGCCA 1207
Query 1304 TGCTGAAGCACCGGGACTACGAGACGGCCACACTATCGGACATCAAAGCCCTCATTCGC-----AAGCACGAGG 1372
|||||...||...||||||.|||||.|||||.||.|||||.|||||.||||| || |||||.||||
Sbjct 1208 TGCTGCGACAGAAGGACTATGAGACCGCCACCCTCTCGGAGATCAAGGCCCT-----GCTCAAGAAGCATGAGG 1276
Query 1373 CCTTCGAGAGCGACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAG 1446
||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||.||.|||||||||||.|||
Sbjct 1277 CCTTCGAGAGTGACCTGGCTGCCCACCAGGACCGTGTGGAGCAGATTGCCGCCATCGCACAGGAGCTCAATGAG 1350
Query 1447 CTGGATTACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACGCCCTCGGCTC 1520
|||||.||.||.|||||.|.||.|||||||.||||.|||||.|||||||||||||||||||||...||.||..|
Sbjct 1351 CTGGACTATTATGACTCACCCAGTGTCAACGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGC 1424
Query 1521 TCTGACACATAGTCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGG 1594
.||.||.||.|..||.||||||||.||||||...||.|||||.|.|||||||.||||.|||||||||.||.|||
Sbjct 1425 CCTAACTCAGAAGCGAAGGGAAGCTCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAGCTGTACTTGG 1498
Query 1595 AATACGCCAAGCGCGCGGCCCCCTTCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGACATGTTCATC 1668
|.||.||||||||.||.||.|||||||||||||||||||||.|.||||||||||||||.|||||||..|||||.
Sbjct 1499 AGTATGCCAAGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATT 1572
Query 1669 GTCCATACCATCGAGGAGATTGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCGGACGCCGA 1742
||.||.|||||.||||||||..||||.||||.|.||||||||||.|||||||||.|||||||.||.||.|||||
Sbjct 1573 GTGCACACCATTGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTCCCTGATGCCGA 1646
Query 1743 TAGGGAGCGCGAGGCCATCCTGGCCATCCACAAGGAGG---CCCAGAGGATCGCTGAGAGCAACCACATCAAGC 1813
.|.|||||||..|||||||||||.|||||||||.|||| || |.|||.|...|||.|.|||||.||||..
Sbjct 1647 CAAGGAGCGCCTGGCCATCCTGGGCATCCACAATGAGGTGTCC---AAGATTGTCCAGACCTACCACGTCAATA 1717
Query 1814 TGTCGGGCAGCAACCCCTACACCACCGTCACCCCGCAAATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTG 1887
||.||||||.||||||||||||.|||.||||.||.||....|||||...|||.|||||..|.||||.|||||||
Sbjct 1718 TGGCGGGCACCAACCCCTACACAACCATCACGCCTCAGGAGATCAATGGCAAATGGGACCACGTGCGGCAGCTG 1791
Query 1888 GTGCC----AAAACGGGACCATGCCCTCCTGGAGGAGCA-----GAGCAAGCAGCAGTCCAACGAGCACCTGCG 1952
||||| | |||||||.||.||...||||||||| || ||||||..|||.|||...||.||
Sbjct 1792 GTGCCTCGGA----GGGACCAAGCTCTGACGGAGGAGCATGCCCGA-----CAGCAGCACAATGAGAGGCTACG 1856
Query 1953 CCGCCAGTTCGCCAG-CCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGCGCATC 2025
|...|||||.| .|| ||||||||||||..|.||||||||||||||||||||||||||||||||||||.|.|||
Sbjct 1857 CAAGCAGTTTG-GAGCCCAGGCCAATGTCATCGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATC 1929
Query 2026 TCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGA-ACGCAGCATCGTGGACT 2098
||||||||||||.|.||||||||||||||||||||.|||||||||..||||||||| |.| ||||||||..|||
Sbjct 1930 TCCATTGAGATGCATGGGACCCTGGAGGACCAGCTCAGCCACCTGCGGCAGTATGAGAAG-AGCATCGTCAACT 2002
Query 2099 ACAAGCCCAACCTGGACCTGCTGGAGCAGC-AGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCA 2171
|||||||.||..|.||.|.||||||| .|| |.||||||||||||||||||||.||||||||||||||||||||
Sbjct 2003 ACAAGCCAAAGATTGATCAGCTGGAG-GGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACAACAAGCA 2075
Query 2172 CACCAACTATACCATGGAGCACATCCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAACG 2245
|||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||.|.||||||||.|
Sbjct 2076 CACCAACTACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAATG 2149
Query 2246 AGGTGGAGAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCC 2319
||||.||||||||||||||.|||||.||.|||||||||||||||||||||||||||.|.|||||||||||.|||
Sbjct 2150 AGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTTCCGGGCCTCC 2223
Query 2320 TTCAACCACTTCGACAAGGATCATGGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCATCAGCCTG-- 2391
|||||||||||.|||..||||||...|||..|.|||||.||||||||||||||.|||||||||||||||.||
Sbjct 2224 TTCAACCACTTTGACCGGGATCACTCCGGCACACTGGGTCCCGAGGAGTTCAAAGCCTGCCTCATCAGCTTGGG 2297
Query 2392 ----------GGCTACGAC--------------------------------------GTGG-----------AG 2406
|||.||||| |||| ||
Sbjct 2298 TTATGATATTGGCAACGACCCCCAGGTACTCGCCTCCTGCATGGAGCACGCTCAGGGGTGGCGTCTGGGGCAAG 2371
Query 2407 AA------------------------------------------------------------------------ 2408
||
Sbjct 2372 AAATAATGCGTTTTTCCTTTTTCTCTTCTCTCTGTCTGGATCTCCTGTCCCCCTCCTGTGGGCCATGGGGCTCG 2445
Query 2409 -------------------------------------------------------------------------- 2408
Sbjct 2446 TCCTCTCCTGCTGTCTCTGTCTGCCCCATCACTGGTCCACCCTCTGCCCTCTGCTGTCTTTCATGGCAACCTAC 2519
Query 2409 -------------------------------------------------------------------------- 2408
Sbjct 2520 TGGGTGCCCGCTGTCTTCCGTCCTCGCTGCTCTTCATCCCATGGGTGGATTTTTGCATCTCCCTGCTCTGTCTT 2593
Query 2409 -------------------------------------------------------------------------- 2408
Sbjct 2594 CCTCCTGTCTTTGGACATTTCCACCGATGTGTGTTCGCATCTTCTCCTATGTTCCTTTACCTATCCTGACCCCC 2667
Query 2409 -------------------------------------------------------------------------- 2408
Sbjct 2668 AAAACCATAAATCTCATCCCCGTTCTGGCCATCTGTTCCTGTCTTCCTGGCCCCGGGCCGGCCCTTCCTCTTCC 2741
Query 2409 --------CGACC------------------------------------------GGCA--------------- 2417
||||| ||||
Sbjct 2742 TGCCTTCCCGACCCTCCTTGTGTCTTGGTACCACTGCCCCCCACAGAAGAAGACAGGCATGATGGACACGGATG 2815
Query 2418 -------------------------------------GGGTGAGGCCGAGTTCAACCGCATCATGAGCCTGGTC 2454
|||.||.||.||.||...|||||||||||||.|.||.
Sbjct 2816 ATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATGGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTG 2889
Query 2455 GACCCCAACCATAGC---GGCCTTGTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACAC 2525
|||||||||| || ||..|.|||||.|||||.||||||||.|||||||||||.||.|||||..|||||||
Sbjct 2890 GACCCCAACC---GCCTGGGGGTAGTGACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACAC 2960
Query 2526 GGACACGGCTGACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAAGAACTTCATCACAGCTGAGGAGC 2599
.||.||.||.|||||.|||||.||||||||||||.||.|.||.|||||||||||||.|||.||....||.||||
Sbjct 2961 AGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAAGAACTACATTACCATGGACGAGC 3034
Query 2600 TGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCCCTGACGCC 2673
||||..|.||||||||.|||||||||||.||||||||||||||.||.|||||.||.|||...|||||.|||.||
Sbjct 3035 TGCGCCGCGAGCTGCCACCCGACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCC 3108
Query 2674 GTGCCCGGTGCCCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTG 2733
|||||.|||||.||.|||||||.|||||||||||||||..||||.||||||||.|||||.
Sbjct 3109 GTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTC 3168