Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00016
Subject:
XM_017021725.1
Aligned Length:
3316
Identities:
2184
Gaps:
731

Alignment

Query    1  ATGGTGGACTACCACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGG  74
                                                                      |||| |||.|||    
Sbjct    1  ----------------------------------------------------------ATGG-GCTTGCG----  11

Query   75  GGGCAGCATGGGCGACTACATGGCCCAGGAGGACGACTGGGACCGGGACCTGCTGCT-GGACCCGGCCTGGGAG  147
                           ||||                           |.|||||..|| .||||   ||.|||| 
Sbjct   12  ---------------CTAC---------------------------GTCCTGCCCCTCCGACC---CCCGGGA-  39

Query  148  AAGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGATCGAGAACAT  221
                        |||||.||||||||||||||.|||||||||||.||||||||.||.|||||||||||||||||
Sbjct   40  ------------AAGACATTCACGGCATGGTGTAACTCCCACCTCCGGAAGGCGGGGACACAGATCGAGAACAT  101

Query  222  TGATGAGGACTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGC  295
            .||.|||||||||||.||.||.||.||||||||||||||.|||||||||||.|||||.||.||.||..|.||||
Sbjct  102  CGAAGAGGACTTCCGGGATGGCCTGAAGCTCATGCTGCTGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGC  175

Query  296  CGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGC  369
            |.|||||.||.|||||||||||||||||.|||..|||.||.|||||.||.|||||.||.||.||||||||||||
Sbjct  176  CAGAGCGAGGCAAGATGAGAGTGCACAAGATCTCCAACGTCAACAAGGCCCTGGATTTCATAGCCAGCAAAGGC  249

Query  370  GTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAACGCAAAGATGACCCTGGGAATGATCTGGAC  443
            |||||.|||||.||||||||.||.|||||.||.|||||.||.||.|..||||||||||||||.|||||||||||
Sbjct  250  GTCAAACTGGTGTCCATCGGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCATGATCTGGAC  323

Query  444  CATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTCTCTGGT  517
            |||||||||..|.||.|||||||||||||||||||||||||||||.||.||||||||||||||.||.||.||||
Sbjct  324  CATCATCCTGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGAAGGGCTGCTCCTGTGGT  397

Query  518  GCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGATGGTCTTGCC  591
            |.|||||||||||||||||.||.||.||.|||||..|.||||||||||||||.||||||||||||||.||.|.|
Sbjct  398  GTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTCCACATAAGCTGGAAGGATGGCCTCGGC  471

Query  592  TTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGACCCTGTCAC  665
            |||..|||..||||||||||.|||.|.||.|||||||||||.||.|..||||||.|||||||.||.||..||||
Sbjct  472  TTCTGTGCTTTGATCCACCGACACCGGCCCGAGCTGATTGACTACGGGAAGCTGCGGAAGGATGATCCACTCAC  545

Query  666  CAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAGGACATCG  739
            .||.|||||.|..||.||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||.|||||||
Sbjct  546  AAATCTGAATACGGCTTTTGACGTGGCAGAGAAGTACCTGGACATCCCCAAGATGCTGGATGCCGAAGACATCG  619

Query  740  T--GAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTCAGGAG  811
            |  ||  ||.|||||.||.||.|||||.|||||.|||||.||.|||||.|||||||||||.|||||.||.||||
Sbjct  620  TTGGA--ACTGCCCGACCGGATGAGAAAGCCATCATGACTTACGTGTCTAGCTTCTACCACGCCTTCTCTGGAG  691

Query  812  CGCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGGCTGTCAACCAAGAGAACGAGCACCTGATG  885
            |.||||||||.||.||.||.|||||.||.|||||.||||||.||||.||||||||.|||||||||||.||.|||
Sbjct  692  CCCAGAAGGCGGAGACAGCAGCCAATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAGCTTATG  765

Query  886  GAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGT  959
            ||.||||||||||||||||||||.||.||..|||||||||||||.|||||.|||||.|||||||||.||||.||
Sbjct  766  GAAGACTACGAGAAGCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTGGAGAACCGGGT  839

Query  960  GCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGTGTGCACAAGCCGC  1033
            ||||.|.||.||.||.||.|..|||||.||||||||||||||||||||.|||||||||||..||||||||||||
Sbjct  840  GCCCGAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACTACCGGCGCCTGCACAAGCCGC  913

Query 1034  CCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGCCTCAGCAACCGG  1107
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  914  CCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGGCTCAGCAACCGG  987

Query 1108  CCCGCCTTCATGCCCTCCGAGGGCAAGATGGTCTCGGACATCAACAATGGCT--GGCAGCACTTGGAGCAGGCT  1179
            ||.||||||||||||||.|||||||.|||||||||||||||||||||||.||  |||.|  |.|||||||||..
Sbjct  988  CCTGCCTTCATGCCCTCTGAGGGCAGGATGGTCTCGGACATCAACAATGCCTGGGGCTG--CCTGGAGCAGGTG  1059

Query 1180  GAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTT  1253
            |||||||||||.|||||||||.||||||||||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct 1060  GAGAAGGGCTATGAGGAGTGGTTGCTGAATGAGATCCGGAGGCTGGAGCGACTGGACCACCTGGCAGAGAAGTT  1133

Query 1254  CCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGAC------------------------GGGAAGGAAGCCA  1303
            |||||||||||||||||||||||||||||||||||||                        ||.||.||.||||
Sbjct 1134  CCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGCCATGTGGCCCTCTCTCAACCCAGGCAAAGAGGCCA  1207

Query 1304  TGCTGAAGCACCGGGACTACGAGACGGCCACACTATCGGACATCAAAGCCCTCATTCGC-----AAGCACGAGG  1372
            |||||...||...||||||.|||||.|||||.||.|||||.|||||.|||||     ||     |||||.||||
Sbjct 1208  TGCTGCGACAGAAGGACTATGAGACCGCCACCCTCTCGGAGATCAAGGCCCT-----GCTCAAGAAGCATGAGG  1276

Query 1373  CCTTCGAGAGCGACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAG  1446
            ||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||.||.|||||||||||.|||
Sbjct 1277  CCTTCGAGAGTGACCTGGCTGCCCACCAGGACCGTGTGGAGCAGATTGCCGCCATCGCACAGGAGCTCAATGAG  1350

Query 1447  CTGGATTACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACGCCCTCGGCTC  1520
            |||||.||.||.|||||.|.||.|||||||.||||.|||||.|||||||||||||||||||||...||.||..|
Sbjct 1351  CTGGACTATTATGACTCACCCAGTGTCAACGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGC  1424

Query 1521  TCTGACACATAGTCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGG  1594
            .||.||.||.|..||.||||||||.||||||...||.|||||.|.|||||||.||||.|||||||||.||.|||
Sbjct 1425  CCTAACTCAGAAGCGAAGGGAAGCTCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAGCTGTACTTGG  1498

Query 1595  AATACGCCAAGCGCGCGGCCCCCTTCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGACATGTTCATC  1668
            |.||.||||||||.||.||.|||||||||||||||||||||.|.||||||||||||||.|||||||..|||||.
Sbjct 1499  AGTATGCCAAGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATT  1572

Query 1669  GTCCATACCATCGAGGAGATTGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCGGACGCCGA  1742
            ||.||.|||||.||||||||..||||.||||.|.||||||||||.|||||||||.|||||||.||.||.|||||
Sbjct 1573  GTGCACACCATTGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTCCCTGATGCCGA  1646

Query 1743  TAGGGAGCGCGAGGCCATCCTGGCCATCCACAAGGAGG---CCCAGAGGATCGCTGAGAGCAACCACATCAAGC  1813
            .|.|||||||..|||||||||||.|||||||||.||||   ||   |.|||.|...|||.|.|||||.||||..
Sbjct 1647  CAAGGAGCGCCTGGCCATCCTGGGCATCCACAATGAGGTGTCC---AAGATTGTCCAGACCTACCACGTCAATA  1717

Query 1814  TGTCGGGCAGCAACCCCTACACCACCGTCACCCCGCAAATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTG  1887
            ||.||||||.||||||||||||.|||.||||.||.||....|||||...|||.|||||..|.||||.|||||||
Sbjct 1718  TGGCGGGCACCAACCCCTACACAACCATCACGCCTCAGGAGATCAATGGCAAATGGGACCACGTGCGGCAGCTG  1791

Query 1888  GTGCC----AAAACGGGACCATGCCCTCCTGGAGGAGCA-----GAGCAAGCAGCAGTCCAACGAGCACCTGCG  1952
            |||||    |    |||||||.||.||...|||||||||     ||     ||||||..|||.|||...||.||
Sbjct 1792  GTGCCTCGGA----GGGACCAAGCTCTGACGGAGGAGCATGCCCGA-----CAGCAGCACAATGAGAGGCTACG  1856

Query 1953  CCGCCAGTTCGCCAG-CCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGCGCATC  2025
            |...|||||.| .|| ||||||||||||..|.||||||||||||||||||||||||||||||||||||.|.|||
Sbjct 1857  CAAGCAGTTTG-GAGCCCAGGCCAATGTCATCGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATC  1929

Query 2026  TCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGA-ACGCAGCATCGTGGACT  2098
            ||||||||||||.|.||||||||||||||||||||.|||||||||..||||||||| |.| ||||||||..|||
Sbjct 1930  TCCATTGAGATGCATGGGACCCTGGAGGACCAGCTCAGCCACCTGCGGCAGTATGAGAAG-AGCATCGTCAACT  2002

Query 2099  ACAAGCCCAACCTGGACCTGCTGGAGCAGC-AGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCA  2171
            |||||||.||..|.||.|.||||||| .|| |.||||||||||||||||||||.||||||||||||||||||||
Sbjct 2003  ACAAGCCAAAGATTGATCAGCTGGAG-GGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACAACAAGCA  2075

Query 2172  CACCAACTATACCATGGAGCACATCCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAACG  2245
            |||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||.|.||||||||.|
Sbjct 2076  CACCAACTACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAATG  2149

Query 2246  AGGTGGAGAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCC  2319
            ||||.||||||||||||||.|||||.||.|||||||||||||||||||||||||||.|.|||||||||||.|||
Sbjct 2150  AGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTTCCGGGCCTCC  2223

Query 2320  TTCAACCACTTCGACAAGGATCATGGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCATCAGCCTG--  2391
            |||||||||||.|||..||||||...|||..|.|||||.||||||||||||||.|||||||||||||||.||  
Sbjct 2224  TTCAACCACTTTGACCGGGATCACTCCGGCACACTGGGTCCCGAGGAGTTCAAAGCCTGCCTCATCAGCTTGGG  2297

Query 2392  ----------GGCTACGAC--------------------------------------GTGG-----------AG  2406
                      |||.|||||                                      ||||           ||
Sbjct 2298  TTATGATATTGGCAACGACCCCCAGGTACTCGCCTCCTGCATGGAGCACGCTCAGGGGTGGCGTCTGGGGCAAG  2371

Query 2407  AA------------------------------------------------------------------------  2408
            ||                                                                        
Sbjct 2372  AAATAATGCGTTTTTCCTTTTTCTCTTCTCTCTGTCTGGATCTCCTGTCCCCCTCCTGTGGGCCATGGGGCTCG  2445

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2446  TCCTCTCCTGCTGTCTCTGTCTGCCCCATCACTGGTCCACCCTCTGCCCTCTGCTGTCTTTCATGGCAACCTAC  2519

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2520  TGGGTGCCCGCTGTCTTCCGTCCTCGCTGCTCTTCATCCCATGGGTGGATTTTTGCATCTCCCTGCTCTGTCTT  2593

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2594  CCTCCTGTCTTTGGACATTTCCACCGATGTGTGTTCGCATCTTCTCCTATGTTCCTTTACCTATCCTGACCCCC  2667

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2668  AAAACCATAAATCTCATCCCCGTTCTGGCCATCTGTTCCTGTCTTCCTGGCCCCGGGCCGGCCCTTCCTCTTCC  2741

Query 2409  --------CGACC------------------------------------------GGCA---------------  2417
                    |||||                                          ||||               
Sbjct 2742  TGCCTTCCCGACCCTCCTTGTGTCTTGGTACCACTGCCCCCCACAGAAGAAGACAGGCATGATGGACACGGATG  2815

Query 2418  -------------------------------------GGGTGAGGCCGAGTTCAACCGCATCATGAGCCTGGTC  2454
                                                 |||.||.||.||.||...|||||||||||||.|.||.
Sbjct 2816  ATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATGGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTG  2889

Query 2455  GACCCCAACCATAGC---GGCCTTGTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACAC  2525
            ||||||||||   ||   ||..|.|||||.|||||.||||||||.|||||||||||.||.|||||..|||||||
Sbjct 2890  GACCCCAACC---GCCTGGGGGTAGTGACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACAC  2960

Query 2526  GGACACGGCTGACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAAGAACTTCATCACAGCTGAGGAGC  2599
            .||.||.||.|||||.|||||.||||||||||||.||.|.||.|||||||||||||.|||.||....||.||||
Sbjct 2961  AGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAAGAACTACATTACCATGGACGAGC  3034

Query 2600  TGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCCCTGACGCC  2673
            ||||..|.||||||||.|||||||||||.||||||||||||||.||.|||||.||.|||...|||||.|||.||
Sbjct 3035  TGCGCCGCGAGCTGCCACCCGACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCC  3108

Query 2674  GTGCCCGGTGCCCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTG  2733
            |||||.|||||.||.|||||||.|||||||||||||||..||||.||||||||.|||||.
Sbjct 3109  GTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTC  3168