Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00022
- Subject:
- XM_017005408.1
- Aligned Length:
- 784
- Identities:
- 228
- Gaps:
- 524
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAGGATGAGGAGAAGGAGGAGGATGAAGATGAAGAAGATGATGATGCTGAATAAGTTTGTTTTAGTGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTTTTTTTCTTATCTATAAAGCATTTAAGCCCCTTGTACACAACTCATTCCTTTCAAAGAAAAACAATTGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTATAAATTCATACAATTATCAGAGTTTGGTTTTGGTCAAGTCATAATTGTGAGTGAAGAACCATGGAAGGAG 222
Query 1 ---ATGTCTACCGCCCAGTCACTCAAATCCGTGGACTACGAGGTGTTCGGAAGA--------GTGC---AGGGT 60
||.||| .||.|| ||| ||||| .|||..||.| .||| | ||
Sbjct 223 AACATTTCT--TGCTCA-TCA-------------ACTAC-----TTTCATAAAATCAACAATTTGCTTAA--GT 273
Query 61 GTTTGCTTCAGAATGTATACAGAAGATGAAGCTAGGAAAATAGGAGTGGTTGGCTGGGTGAAGAATACCAGCAA 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 GTTTGCTTCAGAATGTATACAGAAGATGAAGCTAGGAAAATAGGAGTGGTTGGCTGGGTGAAGAATACCAGCAA 347
Query 135 AGGCACCGTGACAGGCCAAGTGCAGGGGCCAGAAGACAAAGTCAATTCCA---TGAAGTCC--TGGCTGAGCAA 203
|||||||||||||||||||||||||||||||||||||||||||||||||| ||.|||.| |||| .|||
Sbjct 348 AGGCACCGTGACAGGCCAAGTGCAGGGGCCAGAAGACAAAGTCAATTCCATGTTGGAGTGCAGTGGC---ACAA 418
Query 204 GGTTGG--------AAGCCCT-------------AGTTCTCGC--ATTGA-CCGCACAA---------ACTTTT 244
..|.|| ||.|.|| ||.||||.| |.|.| ||.|.||| |||
Sbjct 419 TCTCGGCTCACTACAACCTCTGCCTTCCAGGCTCAGATCTCCCCGACTCAGCCTCCCAAGTAGCTGGGACT--- 489
Query 245 CTAATGAAAA------AACCATC-----------TCTAAG----CTTGAAT----------ACTCTAATTTTAG 287
|.| |.|||.| |.|||| |||.||| ||..|||...|||
Sbjct 490 -------ACAGGTGTGAGCCACCGTGCCTGGCCTTATAAGGCTACTTTAATGTTTCATTGGACAGTAAGAATAG 556
Query 288 TATTAGAT--AC-------------------------------------------------------------- 297
|||| ||| ||
Sbjct 557 TATT-GATGGACCAGATTTTGTTTGTAGATTACAATCAAACTAATATGTTTGTAGGCAGGCCTGTGAAGAAATT 629
Query 298 -------------------------------------------------------------------------- 297
Sbjct 630 CTCAGAGTTGGGAGTAGCATTTCTATGTTTAGGAATGGACTTCCCACTTGGGCTGGCCTCGAGAAGAATTGTGG 703
Query 298 -------------------------------------------- 297
Sbjct 704 CTTCCCTCTCCAATTTGTATGTCCTGTGGCATCTCCTCCAGCGT 747