Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00028
- Subject:
- NM_001288578.1
- Aligned Length:
- 1122
- Identities:
- 660
- Gaps:
- 366
Alignment
Query 1 ATGGCGAACGAGGTTATCAAGTGCAAGGCTGCAGTTGCTTGGGAGGCTGGAAAGCCTCTCTCCATAGAGGAGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAGGTGGCACCCCCAAAGGCTCATGAAGTTCGAATCAAGATCATTGCCACTGCGGTTTGCCACACCGATGCCT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATACCCTGAGTGGAGCTGATCCTGAGGGTTGTTTTCCAGTGATCTTGGGACATGAAGGTGCTGGAATTGTGGAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGTGTTGGTGAGGGAGTTACTAAGCTGAAGGCGGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ATGCAAATTTTGTCTAAATCCTAAAACTAACCTTTGCCAGAAGATAAGAGTCACTCAAGGGAAAGGATTAATGC 370
||||
Sbjct 1 ----------------------------------------------------------------------ATGC 4
Query 371 CAGATGGTACCAGCAGATTTACTTGCAAAGGAAAGACAATTTTGCATTACATGGGAACCAGCACATTTTCTGAA 444
|||||||.||.|||||||||||.||||||||||||.|..||||.||.|.||||||.||.|||||||||||.||.
Sbjct 5 CAGATGGGACTAGCAGATTTACCTGCAAAGGAAAGTCTGTTTTTCACTTCATGGGGACTAGCACATTTTCCGAG 78
Query 445 TACACAGTTGTGGCTGATATCTCTGTTGCTAAAATAGATCCTTTAGCACCTTTGGATAAAGTCTGCCTTCTAGG 518
|||||||||||||||||.|||||||||||||||||.|||||||..||.|||||||||||||||||||||||.||
Sbjct 79 TACACAGTTGTGGCTGACATCTCTGTTGCTAAAATCGATCCTTCGGCCCCTTTGGATAAAGTCTGCCTTCTCGG 152
Query 519 TTGTGGCATTTCAACCGGTTATGGTGCTGCTGTGAACACTGCCAAGTTGGAGCCTGGCTCTGTTTGTGCCGTCT 592
.|||||.||||||||.||.||.||.|||||||||||||||||||||.||||||||||.|||..|||||||||||
Sbjct 153 CTGTGGTATTTCAACTGGCTACGGGGCTGCTGTGAACACTGCCAAGGTGGAGCCTGGTTCTACTTGTGCCGTCT 226
Query 593 TTGGTCTGGGAGGAGTCGGATTGGCAGTTATCATGGGCTGTAAAGTGGCTGGTGCTTCCCGGATCATTGGTGTG 666
||||.|||||||||||.|||.|||||||.||||||||||||||.|||||||||||.|||||||||||||||.|.
Sbjct 227 TTGGCCTGGGAGGAGTTGGACTGGCAGTGATCATGGGCTGTAAGGTGGCTGGTGCATCCCGGATCATTGGTATC 300
Query 667 GACATCAATAAAGATAAATTTGCAAGGGCCAAAGAGTTTGGAGCCACTGAATGTATTAACCCTCAGGATTTTAG 740
||||||||||||||||||||.||||.|||||||||.|||||||||.||||||||||||.|||.||.||.||.||
Sbjct 301 GACATCAATAAAGATAAATTCGCAAAGGCCAAAGAATTTGGAGCCTCTGAATGTATTAGCCCCCAAGACTTCAG 374
Query 741 TAAACCCATCCAGGAAGTGCTCATTGAGATGACCGATGGAGGAGTGGACTATTCCTTTGAATGTATTGGTAATG 814
||||.|||||||||||||.|||.||||||||||.|||||.||.|||||.||.||||||||.||.|||||.||.|
Sbjct 375 TAAATCCATCCAGGAAGTCCTCGTTGAGATGACAGATGGGGGCGTGGATTACTCCTTTGAGTGCATTGGCAACG 448
Query 815 TGAAGGTCATGAGAGCAGCACTTGAGGCATGTCACAAGGGCTGGGGCGTCAGCGTCGTGGTTGGAGTAGCTGCT 888
||||||||||||||.||||.|||||||||...|||||.||||||||.|||||.||.||.||.||||||||||||
Sbjct 449 TGAAGGTCATGAGATCAGCCCTTGAGGCAGCCCACAAAGGCTGGGGTGTCAGTGTGGTAGTGGGAGTAGCTGCT 522
Query 889 TCAGGTGAAGAAATTGCCACTCGTCCATTCCAGCTGGTAACAGGTCGCACATGGAAAGGCACTGCCTTTGGAGG 962
|||||.||||||||..||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||
Sbjct 523 TCAGGGGAAGAAATCTCCACTCGTCCATTCCAGCTGGTGACAGGACGCACATGGAAAGGCACCGCCTTTGGAGG 596
Query 963 ATGGAAGAGTGTAGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGATGAATTTG 1036
||||||||||||.||.||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 597 ATGGAAGAGTGTGGAGAGTGTCCCAAAGCTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGACGAATTTG 670
Query 1037 TGACTCACAATCTGTCTTTTGATGAAATCAACAAAGCCTTTGAACTGATGCATTCTGGAAAGAGCATTCGAACT 1110
||||...||||||.||.||.||..||||.|||.||||||||||.||||||||.||.|||.|.||||||||||||
Sbjct 671 TGACCGGCAATCTCTCCTTCGACCAAATTAACCAAGCCTTTGATCTGATGCACTCGGGAGACAGCATTCGAACT 744
Query 1111 GTTGTAAAGATT 1122
|||.|||||||.
Sbjct 745 GTTCTAAAGATG 756