Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00108
• Subject: XM_024454053.1
• Aligned Length: 1389
• Identities: 1081
• Gaps: 273

Alignment

Query    1  ATGAAGACGGGACATTTTGAAATAGTCACCATGCTGCTGGCAACCATGATTCTAGTGGACATTTTCCAGGTGAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGACGGGACATTTTGAAATAGTCACCATGCTGCTGGCAACCATGATTCTAGTGGACATTTTCCAGGTGAA  74

Query   75  GGCTGAAGTGTTAGACATGGCAGATAATGCATTTGATGATGAATACCTGAAATGTACGGACAGGATGGAAATTA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCTGAAGTGTTAGACATGGCAGATAATGCATTTGATGATGAATACCTGAAATGTACGGACAGGATGGAAATTA  148

Query  149  AATACGTTCCCCAACTGCTAAAGGAGGAAAAAGCAAGCCACCAGCAATTAGATACTGTGTGGGAAAATGCAAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AATACGTTCCCCAACTGCTAAAGGAGGAAAAAGCAAGCCACCAGCAATTAGATACTGTGTGGGAAAATGCAAAA  222

Query  223  GCCAAATGGGCAGCCCGAAAGACTCAAATCTTTCTCCCTATGAATTTTAAGGATAACCATGGAATAGCCCTGAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCAAATGGGCAGCCCGAAAGACTCAAATCTTTCTCCCTATGAATTTTAAGGATAACCATGGAATAGCCCTGAT  296

Query  297  GGCATATATTTCCGAAGCTCAAGAGCAAACTCCCTTTTACCATCTGTTCAGTGAAGCTGTGAAGATGGCTGGCC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCATATATTTCCGAAGCTCAAGAGCAAACTCCCTTTTACCATCTGTTCAGTGAAGCTGTGAAGATGGCTGGCC  370

Query  371  AATCTCGAGAAGATTATATCTATGGCTTCCAGTTCAAAGCTTTCCACTTTTACCTCACAAGAGCCCTGCAGTTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATCTCGAGAAGATTATATCTATGGCTTCCAGTTCAAAGCTTTCCACTTTTACCTCACAAGAGCCCTGCAGTTG  444

Query  445  CTGAGAAAACCTTGTGAGGCCAGTTCCAAAACTGTGGTATATAGAACAAGCCAGGGCACTTCATTTACATTTGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGAGAAAACCTTGTGAGGCCAGTTCCAAAACTGTGGTATATAGAACAAGCCAGGGCACTTCATTTACATTTGG  518

Query  519  AGGGCTAAACCAAGCCAGGTTTGGCCATTTTACCTTGGCATATTCAGCCAAACCTCAGGCTGCTAATGACCAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGGCTAAACCAAGCCAGGTTTGGCCATTTTACCTTGGCATATTCAGCCAAACCTCAGGCTGCTAATGACCAGC  592

Query  593  TCACTGTGTTATCCATCTACACATGCCTTGGAGTTGACATTGAAAATTTTCTTGATAAAGAAAGTGAAAGAATT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCACTGTGTTATCCATCTACACATGCCTTGGAGTTGACATTGAAAATTTTCTTGATAAAGAAAGTGAAAGAATT  666

Query  667  ACTTTAATACCTCTGAATGAGGTTTTTCAAGTGTCACAGGAGGGGGCTGGCAATAACCTTATCCTTCAAAGCAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACTTTAATACCTCTGAATGAGGTTTTTCAAGTGTCACAGGAGGGGGCTGGCAATAACCTTATCCTTCAAAGCAT  740

Query  741  AAACAAGACCTGCAGCCATTATGAGTGTGCATTTCTAGGTGGACTAAAAACCGAAAACTGTATTGAGAACCTAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAACAAGACCTGCAGCCATTATGAGTGTGCATTTCTAGGTGGACTAAAAACCGAAAACTGTATTGAGAACCTAG  814

Query  815  AATATTTTCAACCCATCTATGTCTACAACCCTGGTGAGAAAAACCAGAAGCTTGAAGACCATAGTGAGAAAAAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AATATTTTCAACCCATCTATGTCTACAACCCTGGTGAGAAAAACCAGAAGCTTGAAGACCATAGTGAGAAAAAC  888

Query  889  TGGAAGCTTGAAGACCATGGTGAGAAAAACCAGAAGCTTGAAGACCATGGTGTGAAAATCCTTGAACCCACCCA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGGAAGCTTGAAGACCATGGTGAGAAAAACCAGAAGCTTGAAGACCATGGTGTGAAAATCCTTGAACCCACCCA  962

Query  963  AATACCTGAAGAT-AAAAGTCAAG-----------------GAAATATCAACAATCCTACT----------CCA  1008
            ||||||||.| || ||||.||.||                 |.||||..||..||.|.|||          ||.
Sbjct  963  AATACCTGGA-ATGAAAATTCCAGAACCTTTTCCACTACCTGGAATAAAAATGATACAACTGAATGAAAAACCT  1035

Query 1009  GGT----------------------------CCAGTTCCTG--TTCCAGGTC-----CCAAAAGCCATCCTTC-  1046
            |||                            |||     ||  |||.|.|||     |||.|    |||.||| 
Sbjct 1036  GGTAATATATTCTTTATTGGGGGTGGAGGCACCA-----TGGATTCTAAGTCCTTTACCATA----ATCATTCA  1100

Query 1047  -----TGCA-TC---------CTCGGGCAAACTGCT--GCT---------------TCCACAGTTT--------  1080
                 |.|| ||         ||.|||.|.||..||  |||               ||| ||||.|        
Sbjct 1101  GTTAGTTCAGTCTTATGGGGTCTGGGGAAGACATCTGGGCTGTACACTTTCCGATATCC-CAGTCTGCAAGCCA  1173

Query 1081  ----GGGA---TGGTCATCATTTTAATCAGTGT--------TTCTGCTATAAATCTCTTTGTTGCTCTG-----  1134
                ||||   ||.|.|..||||...|||||||        ..|||||||       |..|.|.|||||     
Sbjct 1174  GACAGGGAAAGTGTTGAGAATTTCTTTCAGTGTGAGCAGCAGGCTGCTAT-------TACGGTTCTCTGGGCCA  1240

Query 1135  --------------------------------------------------------------------------  1134
                                                                                      
Sbjct 1241  AACATCAAAAAAGGCACTTGATCTTAAACTGGAACAGTTGGCTTCCAGCTGGGCCTGTCTATTCCAGAATGAGG  1314

Query 1135  ---------------------------------------------------------  1134
                                                                     
Sbjct 1315  CAGGCTTCTCAGGGTGAAGGAATCTGTAGACATAGAAATAGCATCATCCAAGAACTG  1371