Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00174
Subject:
XM_006505353.3
Aligned Length:
2752
Identities:
2133
Gaps:
464

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGGGTGACGCCGTTGCCGCGGCGACTCCTCGTCGTCTCCGCCCCCTCCCCCCCCCAAATCCCCTCAGGCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCTGCGCCGGGGCCGCCGGCGGGTTCCAGAGGTGGCCTCCGCCCCGGCCGCTCCGCCCACGCCCCCCGCGCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGCGCCCGCCTCCGCCCGCCCTGCGCCTCCCTTCCCCCTCCCCGCCCCGCGGCGGCCGCTCGGCCCGGCTCGC  222

Query    1  ---------ATGGCGGCGCTGA------------------------------------------------GCGG  17
                     |||||||||||||                                                ||||
Sbjct  223  GCTTCGAAGATGGCGGCGCTGAGTGGCGGCGGTGGCAGCAGCAGCGGTGGCGGCGGCGGCGGTGGCGGCGGCGG  296

Query   18  TGGCGGT---------GGTGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCCCGAGGCCG  82
            |||||||         ||.||||||||.||||.||||||||||||||||||.||.|||||||||||.|||    
Sbjct  297  TGGCGGTGGCGACGGCGGCGGCGGCGCCGAGCAGGGCCAGGCTCTGTTCAATGGCGACATGGAGCCGGAG----  366

Query   83  GCGCCGGCGCCGGCGCCGCGGCCTCTTCGGCTGCGGACCCTGCCATTCCGGAGGAGGTGTGGAATATCAAACAA  156
              ||||||||.|||||||||||||||||||||||||||||.||||||||.||.|||||.|||||||||||.|||
Sbjct  367  --GCCGGCGCTGGCGCCGCGGCCTCTTCGGCTGCGGACCCGGCCATTCCTGAAGAGGTATGGAATATCAAGCAA  438

Query  157  ATGATTAAGTTGACACAGGAACATATAGAGGCCCTATTGGACAAATTTGGTGGGGAGCATAATCCACCATCAAT  230
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||
Sbjct  439  ATGATTAAGTTGACACAGGAACATATAGAGGCCCTATTGGACAAATTTGGTGGAGAGCATAACCCACCATCAAT  512

Query  231  ATATCTGGAGGCCTATGAAGAATACACCAGCAAGCTAGATGCACTCCAACAAAGAGAACAACAGTTATTGGAAT  304
            |||.|||||||||||||||||.||||||||||||||||||||.||.||.|||||||||||.|||.|.|||||||
Sbjct  513  ATACCTGGAGGCCTATGAAGAGTACACCAGCAAGCTAGATGCCCTTCAGCAAAGAGAACAGCAGCTTTTGGAAT  586

Query  305  CTCTGGGGAACGGAACTGATTTTTCTGTTTCTAGCTCTGCATCAATGGATACCGTTACATCTTCTTCCTCTTCT  378
            |.|||||.||.|||.|.||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||
Sbjct  587  CCCTGGGTAATGGAGCAGATTTTTCTGTTTCTAGCTCTGCATCAATGGACACCGTTACATCCTCCTCCTCTTCT  660

Query  379  AGCCTTTCAGTGCTACCTTCATCTCTTTCAGTTTTTCAAAATCCCACAGATGTGGCACGGAGCAACCCCAAGTC  452
            |||||||||||||||||.||||||||||||||||||||||.|||||||||||...||||||.||||||||||||
Sbjct  661  AGCCTTTCAGTGCTACCATCATCTCTTTCAGTTTTTCAAACTCCCACAGATGCATCACGGAACAACCCCAAGTC  734

Query  453  ACCACAAAAACCTATCGTTAGAGTCTTCCTGCCCAACAAACAGAGGACAGTGGTACCTGCAAGGTGTGGAGTTA  526
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||
Sbjct  735  ACCACAGAAACCTATCGTTAGAGTCTTCCTGCCCAACAAACAGAGGACAGTGGTACCCGCAAGATGTGGTGTTA  808

Query  527  CAGTCCGAGACAGTCTAAAGAAAGCACTGATGATGAGAGGTCTAATCCCAGAGTGCTGTGCTGTTTACAGAATT  600
            ||||.||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||
Sbjct  809  CAGTTCGAGACAGTCTAAAGAAAGCACTGATGATGAGAGGTCTCATCCCAGAATGCTGTGCTGTTTACAGAATT  882

Query  601  CAGGATGGAGAGAAGAAACCAATTGGTTGGGACACTGATATTTCCTGGCTTACTGGAGAAGAATTGCATGTGGA  674
            ||||||||||||||||||||||||||.||||||||.||.||||||||||||||||||||.||.||.|||||.||
Sbjct  883  CAGGATGGAGAGAAGAAACCAATTGGCTGGGACACGGACATTTCCTGGCTTACTGGAGAGGAGTTACATGTTGA  956

Query  675  AGTGTTGGAGAATGTTCCACTTACAACACACAACTTTGTACGAAAAACGTTTTTCACCTTAGCATTTTGTGACT  748
            |||..||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||
Sbjct  957  AGTACTGGAGAATGTCCCACTTACAACACACAACTTTGTACGGAAAACTTTTTTCACCTTAGCATTTTGTGACT  1030

Query  749  TTTGTCGAAAGCTGCTTTTCCAGGGTTTCCGCTGTCAAACATGTGGTTATAAATTTCACCAGCGTTGTAGTACA  822
            ||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031  TTTGCCGAAAGCTGCTTTTCCAGGGTTTCCGTTGTCAAACATGTGGTTATAAATTTCACCAGCGTTGTAGTACA  1104

Query  823  GAAGTTCCACTGATGTGTGTTAATTATGACCAACTTGATTTGCTGTTTGTCTCCAAGTTCTTTGAACACCACCC  896
            ||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 1105  GAGGTTCCACTGATGTGTGTAAATTATGACCAACTTGATTTGCTGTTTGTCTCCAAGTTCTTTGAGCATCACCC  1178

Query  897  AATACCACAGGAAGAGGCGTCCTTAGCAGAGACTGCCCTAACATCTGGATCATCCCCTTCCGCACCCGCCTCGG  970
            |.||||||||||.|||||.|||||..|||||||||||||..|||||||   ||||.|||||||||||.||||.|
Sbjct 1179  AGTACCACAGGAGGAGGCCTCCTTCCCAGAGACTGCCCTTCCATCTGG---ATCCTCTTCCGCACCCCCCTCAG  1249

Query  971  ACTCTATTGGGCCCCAAATTCTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATTCCACAGCCCTTCCGACCA  1044
            ||||||.||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  ACTCTACTGGGCCCCAAATCCTCACCAGTCCATCTCCTTCAAAATCCATTCCAATTCCACAGCCCTTCCGACCA  1323

Query 1045  GCAGATGAAGATCATCGAAATCAATTTGGGCAACGAGACCGATCCTCATCAGCTCCCAATGTGCATATAAACAC  1118
            |||||||||||||||||.|||||.|||||||||||||||||.|||||.||||||||||||||.|||||||||||
Sbjct 1324  GCAGATGAAGATCATCGCAATCAGTTTGGGCAACGAGACCGGTCCTCCTCAGCTCCCAATGTTCATATAAACAC  1397

Query 1119  AATAGAACCTGTCAATATTGAT------------------------------------GACTTGATTAGAGACC  1156
            |||.||.|||||.|||||.|||                                    ||.|||||||||||||
Sbjct 1398  AATTGAGCCTGTGAATATCGATGAAAAATTCCCAGAAGTGGAATTACAGGATCAAAGGGATTTGATTAGAGACC  1471

Query 1157  AAGGATTTCGTGGTGATG--------------------------------------------------------  1174
            |.||.|||||||||||||                                                        
Sbjct 1472  AGGGGTTTCGTGGTGATGGAGCCCCCTTGAACCAACTGATGCGCTGTCTTCGGAAATACCAATCCCGGACTCCC  1545

Query 1175  ----------------------------------------------------------------GAGGATCAAC  1184
                                                                            ||||.|||||
Sbjct 1546  AGCCCCCTCCTCCATTCTGTCCCCAGTGAAATAGTGTTTGATTTTGAGCCTGGCCCAGTGTTCAGAGGGTCAAC  1619

Query 1185  CACAGGTTTGTCTGCTACCCCCCCTGCCTCATTACCTGGCTCACTAACTAACGTGAAAGCCTTACAGAAATCTC  1258
            ||||||.|||||.||.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1620  CACAGGCTTGTCCGCCACCCCGCCTGCCTCATTACCTGGCTCACTCACTAACGTGAAAGCCTTACAGAAATCTC  1693

Query 1259  CAGGACCTCAGCGAGAAAGGAAGTCATCT------TCATCCTCAGAAGACAGGAATCGAATGAAAACACTTGGT  1326
            ||||.||||||||.|||||||||||||||      ||||||||.||.|||||.|.|||.|||||||||||||||
Sbjct 1694  CAGGTCCTCAGCGGGAAAGGAAGTCATCTTCTTCCTCATCCTCGGAGGACAGAAGTCGGATGAAAACACTTGGT  1767

Query 1327  AGACGGGACTCGAGTGATGATTGGGAGATTCCTGATGGGCAGATTACAGTGGGACAAAGAATTGGATCTGGATC  1400
            |||.|.||.||.||||||||.|||||||||||||||||.|||||||||||||||||.||||||||||||||.||
Sbjct 1768  AGAAGAGATTCAAGTGATGACTGGGAGATTCCTGATGGACAGATTACAGTGGGACAGAGAATTGGATCTGGGTC  1841

Query 1401  ATTTGGAACAGTCTACAAGGGAAAGTGGCATGGTGATGTGGCAGTGAAAATGTTGAATGTGACAGCACCTACAC  1474
            |||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1842  ATTTGGAACTGTCTACAAGGGAAAGTGGCATGGTGATGTGGCAGTGAAAATGTTGAATGTGACAGCACCCACAC  1915

Query 1475  CTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAGTACTCAGGAAAACACGACATGTGAATATCCTACTCTTC  1548
            ||||.|||.||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||.||.|||
Sbjct 1916  CTCAACAGCTACAGGCCTTCAAAAATGAAGTAGGAGTGCTCAGGAAAACTCGACATGTGAATATCCTCCTTTTC  1989

Query 1549  ATGGGCTATTCCACAAAGCCACAACTGGCTATTGTTACCCAGTGGTGTGAGGGCTCCAGCTTGTATCACCATCT  1622
            |||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||.|||||||||||
Sbjct 1990  ATGGGCTATTCTACAAAGCCACAACTGGCAATTGTTACACAGTGGTGTGAGGGCTCCAGCTTATATCACCATCT  2063

Query 1623  CCATATCATTGAGACCAAATTTGAGATGATCAAACTTATAGATATTGCACGACAGACTGCACAGGGCATGGATT  1696
            |||.||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct 2064  CCACATCATTGAGACCAAATTTGAGATGATCAAACTTATAGATATTGCTCGGCAGACTGCACAGGGCATGGATT  2137

Query 1697  ACTTACACGCCAAGTCAATCATCCACAGAGACCTCAAGAGTAATAATATATTTCTTCATGAAGACCTCACAGTA  1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 2138  ACTTACACGCCAAGTCAATCATCCACAGAGACCTCAAGAGTAATAATATATTTCTTCATGAAGACCTCACGGTA  2211

Query 1771  AAAATAGGTGATTTTGGTCTAGCTACAGTGAAATCTCGATGGAGTGGGTCCCATCAGTTTGAACAGTTGTCTGG  1844
            |||||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 2212  AAAATAGGTGACTTTGGTCTAGCCACAGTGAAATCTCGGTGGAGTGGGTCCCATCAGTTTGAACAGTTGTCTGG  2285

Query 1845  ATCCATTTTGTGGATGGCACCAGAAGTCATCAGAATGCAAGATAAAAATCCATACAGCTTTCAGTCAGATGTAT  1918
            |||.|||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||||||||||.||.|
Sbjct 2286  ATCTATTTTGTGGATGGCACCAGAAGTAATCAGAATGCAAGATAAAAACCCGTATAGCTTTCAGTCAGACGTGT  2359

Query 1919  ATGCATTTGGAATTGTTCTGTATGAATTGATGACTGGACAGTTACCTTATTCAAACATCAACAACAGGGACCAG  1992
            ||||.|||||.|||||||||||.|||.|||||||.||.|||.||||||||||||||||||||||||||||.|||
Sbjct 2360  ATGCGTTTGGGATTGTTCTGTACGAACTGATGACCGGCCAGCTACCTTATTCAAACATCAACAACAGGGATCAG  2433

Query 1993  ATAATTTTTATGGTGGGACGAGGATACCTGTCTCCAGATCTCAGTAAGGTACGGAGTAACTGTCCAAAAGCCAT  2066
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2434  ATAATTTTTATGGTGGGACGAGGATACCTATCTCCAGATCTCAGTAAGGTACGGAGTAACTGTCCAAAAGCCAT  2507

Query 2067  GAAGAGATTAATGGCAGAGTGCCTCAAAAAGAAAAGAGATGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTA  2140
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|
Sbjct 2508  GAAGAGATTAATGGCAGAGTGCCTCAAAAAGAAAAGAGACGAGAGACCACTCTTTCCCCAAATTCTCGCCTCCA  2581

Query 2141  TTGAGCTGCTGGCCCGCTCATTGCCAAAAATTCACCGCAGTGCATCAGAACCCTCCTTGAATCGGGCTGGTTTC  2214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 2582  TTGAGCTGCTGGCCCGCTCATTGCCAAAAATTCACCGCAGTGCATCAGAACCTTCCTTGAATCGGGCTGGTTTC  2655

Query 2215  CAAACAGAGGATTTTAGTCTATATGCTTGTGCTTCTCCAAAAACACCCATCCAGGCAGGGGGATATGGTGCGTT  2288
            ||||||||.|||||||||||.|||||||||||||||||.||||||||||||||.||||||||||||||.|..||
Sbjct 2656  CAAACAGAAGATTTTAGTCTGTATGCTTGTGCTTCTCCGAAAACACCCATCCAAGCAGGGGGATATGGAGAATT  2729

Query 2289  T----CCTGTCCAC  2298
            |    ||| ||.|.
Sbjct 2730  TGCAGCCT-TCAAG  2742

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