Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00215
- Subject:
- NM_007601.3
- Aligned Length:
- 2463
- Identities:
- 836
- Gaps:
- 1536
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCAACTGTTATTAGTCCAACTGTGGCCCCAAGGACGGGGGCTGAGCCCAGGTCCCCAGGGCCAGTTCCTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCAGCTCAAGGCAAGACCACCGAGGCTGGAGGTGGACACCCAAGTGGCATCTATTCGGCCATCATTAGCCGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTTCCGATCATCGGTGTGAAAGAGAAGACATTTGAGCAGCTCCGCAGGAAGTGCCTAGAGAAGAAAGTTCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATCTAGACCCCGAGTTCCCACCGGATGAGACCTCTCTCTTTTACAGTCAGAAGTTCCCCATCCAGTTCGTCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGAGACCTCCGGAAATTTGTGAGAATCCCCGGTTTATCATTGGTGGAGCCAACAGGACTGACATCTGCCAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGATCTAGGGGACTGCTGGTTTCTTGCAGCCATCGCCTGCCTGACCCTGAATGAGCGGCTGCTTTTCCGAGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATACCCCATGATCAAAGTTTCACTGAAAACTACGCAGGGATCTTCCACTTCCAGTTCTGGCGCTATGGAGACTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTAGATGTGGTCATTGACGACTGTCTGCCAACATACAACAATCAGCTGGTTTTCACCAAATCCAACCACCGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGAGTTCTGGAGTGCTCTCCTTGAGAAGGCTTATGCCAAGCTCCATGGCTCCTATGAAGCTCTGAAAGGTGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATACCACAGAAGCCATGGAGGACTTCACAGGAGGGGTGACAGAGTTTTTTGAGATCAAGGATGCTCCGAGTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATGTACAAGATTATGAGGAAAGCTATCGAGAGAGGCTCCCTCATGGGCTGCTCCATTGACGATGGCACGAACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGACTTATGGAACCTCTCCTTCTGGTCTGAACATGGGGGAGTTGATTGCACGGATGGTGAGAAATATGGATAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCGCTGCTCAGAGACTCAGACCTGGACCCCAGGGGCTCAGATGACAGACCGTCACGGACAATTGTTCCAGTGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTATGAAACAAGAATGGCCTGTGGGTTGGTGAAAGGGCATGCCTATTCAGTCACTGGGCTGGAGGAGGCCCTGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAAAGGTGAGAAGGTGAAGTTGGTGCGGCTGCGGAACCCCTGGGGCCAGGTGGAGTGGAACGGCTCTTGGAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATGGTTGGAAGGACTGGAGCTTTGTAGACAAAGATGAGAAGGCCCGTCTACAGCACCAGGTTACTGAGGATGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGAGTTCTGGATGTCATATGATGACTTCGTCTACCATTTCACGAAGCTGGAGATCTGCAACCTCACAGCTGACG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCTGGAGTCCGATAAGCTTCAGACCTGGACGGTGTCTGTAAACGAGGGCCGCTGGGTGAGGGGCTGTTCTGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAGGCTGCCGAAACTTCCCAGACACTTTCTGGACCAACCCGCAGTACCGTCTCAAGCTTCTGGAGGAAGACGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGACCCTGAGGACTCTGAGGTAATCTGCAGCTTCCTCGTGGCTCTGATGCAGAAGAACCGGCGCAAGGACCGGA 1480
Query 1 --------------------------------------------------------ATGCACGGGAACAAGCAG 18
|||||||||||.|||||.
Sbjct 1481 AGCTGGGGGCCAACCTCTTCACTATTGGCTTCGCCATCTACGAGGTTCCCAAAGAGATGCACGGGAATAAGCAA 1554
Query 19 CACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGCAAAACCTACATCAACATGCGGGAGGT 92
|||||||||||||||||||||.||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1555 CACCTGCAGAAGGACTTCTTCTTGTACAACGCCTCCAAGGCCAGAAGCAAAACCTACATCAACATGCGGGAGGT 1628
Query 93 GTCCCAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCATCGTGCCCTCCACCTACGAGCCCCACCAGGAGGGGG 166
|||||||||||||||||||||.|||||||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 1629 GTCCCAGCGCTTCCGCCTGCCACCCAGCGAGTATGTCATCGTACCCTCCACCTACGAGCCCCACCAGGAGGGGG 1702
Query 167 AATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTGAGGAAGTTGAAAATACCATCTCCGTGGATCGG 240
|||||||||||||.||||||||.|||||||||||.|||||||||||||.|||||||||.|||||.|||||||||
Sbjct 1703 AATTCATCCTCCGAGTCTTCTCCGAAAAGAGGAATCTCTCTGAGGAAGCTGAAAATACAATCTCTGTGGATCGG 1776
Query 241 CCAGTGAAAAAGAAAAAAACCAAGCCCATCATCTTCGTTTCGGACAGAGCAAACAGCAACAAGGAGCTGGGTGT 314
|||||||||||||||||||.|||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1777 CCAGTGAAAAAGAAAAAAAACAAGCCCATCATCTTCGTTTCTGACAGAGCAAACAGCAACAAGGAGCTGGGTGT 1850
Query 315 GGACCAGGAGTCAGAGGAGGGCAAAGGCAAAACAAGCCCTGATAAGCAAAAGCAGTCCCCACAGCCACAGCCTG 388
||||||||||.|||||||||||||||.||||.||.|.||.||.||.|.|..|.|..|||||||||||..|||||
Sbjct 1851 GGACCAGGAGGCAGAGGAGGGCAAAGACAAAGCAGGGCCCGAGAAACGAGGGGAAACCCCACAGCCAAGGCCTG 1924
Query 389 GCAGCTCTGATCAGGAAAGTGAGGAACAGCAACAATTCCGGAACATTTTCAAGCAGATAGCAGGAGATGACATG 462
||..|.|.||.||||||||||||||.|||||.||||||||||||||.||||.||||||.|||||.||.||||||
Sbjct 1925 GCCACACAGACCAGGAAAGTGAGGAGCAGCAGCAATTCCGGAACATCTTCAGGCAGATCGCAGGCGACGACATG 1998
Query 463 GAGATCTGTGCAGATGAGCTCAAGAAGGTCCTTAACACAGTCGTGAACAAACACAAGGACCTGAAGACACACGG 536
|||||||||||||||||.||||||||.|||||.||||||||.|||||||||||||||||||||||||||||.||
Sbjct 1999 GAGATCTGTGCAGATGAACTCAAGAATGTCCTCAACACAGTGGTGAACAAACACAAGGACCTGAAGACACAAGG 2072
Query 537 GTTCACACTGGAGTCCTGCCGTAGCATGATTGCGCTCATGGATACAGATGGCTCTGGAAAGCTCAACCTGCAGG 610
||||||.||||||||||||.|.||||||||.||.|||||||||||||||||||||||||..||.||.||.||.|
Sbjct 2073 GTTCACGCTGGAGTCCTGCAGAAGCATGATAGCTCTCATGGATACAGATGGCTCTGGAAGACTGAATCTTCAAG 2146
Query 611 AGTTCCACCACCTCTGGAACAAGATTAAGGCCTGGCAGAAAATTTTCAAACACTATGACACAGACCAGTCCGGC 684
|||||||.|||||||||||.|||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||.
Sbjct 2147 AGTTCCATCACCTCTGGAAAAAGATCAAGGCCTGGCAGAAAATCTTCAAGCACTATGACACAGACCATTCCGGT 2220
Query 685 ACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGATTCCACCTCAACAACCAGCTCTATGACAT 758
||||||||.|||||.||||||||||||||||||||.||.|||||.|||||.|||||||.|||.|||||||||||
Sbjct 2221 ACCATCAATAGCTATGAGATGCGAAATGCAGTCAATGATGCAGGCTTCCATCTCAACAGCCAACTCTATGACAT 2294
Query 759 CATTACCATGCGGTACGCAGACAAACACATGAACATCGACTTTGACAGTTTCATCTGCTGCTTCGTTAGGCTGG 832
|||.||||||||.||.||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 2295 CATCACCATGCGCTATGCGGACAAACACATGAACATCGACTTTGACAGCTTCATCTGCTGCTTCGTCAGGCTGG 2368
Query 833 AGGGCATGTTCAGAGCTTTTCATGCATTTGACAAGGATGGAGATGGTATCATCAAGCTCAACGTTCTGGAGTGG 906
|.||.|||||||||||||||.|.|||||||||||||||||.||||||||||||||.||.||.||.||.||||||
Sbjct 2369 AAGGGATGTTCAGAGCTTTTAACGCATTTGACAAGGATGGCGATGGTATCATCAAACTGAATGTACTTGAGTGG 2442
Query 907 CTGCAGCTCACCATGTATGCC 927
||||||||.||||||||||||
Sbjct 2443 CTGCAGCTTACCATGTATGCC 2463
