Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00300
Subject:
NM_001197082.1
Aligned Length:
1303
Identities:
1128
Gaps:
41

Alignment

Query    1  ATGTCACCCAAGCGCATAGCTAAAAGAAGGTCCCCCCCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGA----  70
            |||.|||||||||||||||||||.||||||||.|||||||.|||||||||||||||||||||||||||||    
Sbjct    1  ATGCCACCCAAGCGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCCATCCCCAAAAGCAAGAAGGTGAAAGA  74

Query   71  -----------------------------------AGGTCTCACACAGGTCCCACAGCACAGAACCCGGCTTGG  109
                                               |.|||||||||||||||||||.|||||||||.|||||||
Sbjct   75  CACTCGTAATCGCGGTCCTGCTACTCGCTCGTGCCAAGTCTCACACAGGTCCCACAACACAGAACCAGGCTTGG  148

Query  110  TGCTGACACTAGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAATGTGATGGAGAGGAAGAAGCCGGCC  183
            ||||||||||.|||||||||||||||||||||||||||||||||||.|.||||.||||||||||||||||||||
Sbjct  149  TGCTGACACTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAAAGTGTGCTGGAGAGGAAGAAGCCGGCC  222

Query  184  CTGGTATCCATTCCGGAGGATGTTGTGCAGGCTGAGGCTGGGGGCATGCACACCGTGTGTCTAAGCAAAAGTGG  257
            .||||..||.|||.|.||||||||||||||||||||||.|||||||||||.||.||||||||.|||.|||||||
Sbjct  223  TTGGTGCCCCTTCTGCAGGATGTTGTGCAGGCTGAGGCCGGGGGCATGCATACTGTGTGTCTGAGCCAAAGTGG  296

Query  258  CCAGGTCTATTCCTTCGGCTGCAATGATGAGGGTGCCCTGGGAAGGGACACATCAGTGGAGGGCTCGGAGATGG  331
            |||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||.||.|||||.||.||||
Sbjct  297  CCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACTTCAGTCGAAGGCTCAGAAATGG  370

Query  332  TCCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAGGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCACC  405
            ||||||||||||||||.|||||||||||.|||||.||.||||||||.||.||||||||||||||||||||||||
Sbjct  371  TCCCTGGGAAAGTGGAACTGCAAGAGAAAGTGGTGCAAGTGTCAGCGGGGGACAGTCACACAGCAGCCCTCACC  444

Query  406  GATGATGGCCGTGTCTTCCTCTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGGACTGTTGGAGCCCATGAA  479
            ||.||.||||||||||||||.||||||||.||||||||||||||.||||||||.||..||||||||||||||||
Sbjct  445  GAAGACGGCCGTGTCTTCCTTTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAA  518

Query  480  GAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGAAACGACCACTTGG  553
            ||||||||||||.|||||.||.|||||||||||||.|||.|||||||||||||||||.||.|||||||||||||
Sbjct  519  GAAGAGCATGGTACCTGTTCAAGTGCAGCTGGATGCGCCCGTGGTAAAGGTGGCCTCGGGGAACGACCACTTGG  592

Query  554  TGATGCTGAC-AGCTGATGGTGACCTCTACACCTTGGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGA  626
            |||||||.|| |.| |||||.|||||||||||||||||.||.|||||.||.||.|||||.||||||||.|||||
Sbjct  593  TGATGCTCACGAAC-GATGGCGACCTCTACACCTTGGGTTGTGGGGAGCAAGGTCAGCTGGGCCGTGTACCTGA  665

Query  627  GTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCA  700
            .||||||||||||||.||||||||.||.|||||.|..||||||||||||||||..||||||.||||||||||||
Sbjct  666  ATTATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGGGCGACTCCTGGTCCCCAGATGTGTGCTGCTGAAATCCA  739

Query  701  GGGGAAGCCGGGGCCACGTGAGATTCCAGGATGCCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGAG  774
            ||||.|.||||||||..|||.|.||||||||||||||.|||||.|||||||||||.|||||||||||||..|||
Sbjct  740  GGGGGACCCGGGGCCGTGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACTTTTGCCATCTCCCGAGAG  813

Query  775  GGCCACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGGAACTCCGGGCACAGAATCTTGCTTCATACC  848
            |||||||||||.|||||.||||||||||||||.||.|||||.||.|||||.|||||.|.||||||||||||.||
Sbjct  814  GGCCACGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGGACTCCAGGCACTGGATCTTGCTTCATTCC  887

Query  849  CCAGAACCTAACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCACCATACAGTCT  922
            .||.|||.|.||||||||||||||||||||||||||||||||.||||||||.|||||||||||.||.|||||||
Sbjct  888  TCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCCTGGGTAGGCTTCTCCGGTGGCCAGCATCACACAGTCT  961

Query  923  GCATGGATTCGGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCTTGGAGAGGGTGCT  996
            ||||||||||||||||.||.||.|||||||||||||||||||||||.|||||.|||||||||||.|||||||||
Sbjct  962  GCATGGATTCGGAAGGGAAGGCGTACAGCCTGGGCCGGGCTGAGTACGGGCGCCTGGGCCTTGGGGAGGGTGCT  1035

Query  997  GAGGAGAAGAGCATACCCACCCTCATCTCCAGGCTGCCTGCTGTCTCCTCGGTGGCTTGTGGGGCCTCTGTGGG  1070
            ||||||||||||||||||||||||||.|||.|||||||.|..||||||||.|||||.||||||||.||||||||
Sbjct 1036  GAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTGCCCGTGGTCTCCTCAGTGGCCTGTGGGGCTTCTGTGGG  1109

Query 1071  GTATGCTGTGACCAAGGATGGTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCACAGGGCAGG  1144
            .|||||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1110  TTATGCTGTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACTACCAGCTGGGCACCGGGCAGG  1183

Query 1145  ATGAGGACGCCTGGAGCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACCGTGTGGTCTTATCTGTGTCCAGC  1218
            ||||.||.||||||||.||||||||.||||..||||||||||||||||||||||||||.|||.||||||||||.
Sbjct 1184  ATGAAGATGCCTGGAGTCCTGTGGAAATGACTGGCAAACAGCTGGAGAACCGTGTGGTGTTAACTGTGTCCAGT  1257

Query 1219  GGGGGCCAGCATACAGTCTTATTAGTCAAGGACAAAGAACAGAGC  1263
            |||||||||||.||.||||||.||||.||||||.|.|.|||||||
Sbjct 1258  GGGGGCCAGCACACGGTCTTACTAGTTAAGGACCAGGCACAGAGC  1302

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