Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00314
Subject:
NM_001355069.1
Aligned Length:
1255
Identities:
1156
Gaps:
5

Alignment

Query    1  ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTTGGCCGGAGCGGGGTC  74
            |||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.|||||.|||||
Sbjct    1  ATGGCTGGTCCCTTCTCCCGTCTGCTGTCTGCCCGCCCTGGACTCAGGCTCCTGGCTTTGGCTGGAGCTGGGTC  74

Query   75  TCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAG----TGAACGACGGAGGCTGTATCCC  144
            |||..||||.|||.||||||||||.||||||.|||||.|||||||| |    ||||||..||||.|||||||||
Sbjct   75  TCTCACCGCCGGGATTCTGCTCCGCCCGGAATCTGTAGGAGCTGCC-GCTGCTGAACGGAGGAGACTGTATCCC  147

Query  145  CCGAGCGCTGAGTACCCAGACCTCCGAAAGCACAACAACTGCATGGCCAGTCACCTGACCCCAGCAGTCTATGC  218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  CCGAGCGCTGAGTACCCAGACCTCCGAAAGCACAACAACTGCATGGCCAGTCACCTGACCCCAGCAGTCTATGC  221

Query  219  ACGGCTCTGCGACAAGACCACACCCACTGGTTGGACGCTAGATCAGTGTATCCAGACTGGCGTGGACAACCCTG  292
            ||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||||||||||
Sbjct  222  ACGGCTCTGCGACAAGACCACACCCACTGGTTGGACACTAGATCAGTGCATCCAGACTGGAGTGGACAACCCTG  295

Query  293  GCCACCCCTTCATCAAGACTGTGGGCATGGTGGCTGGAGATGAGGAGACCTATGAGGTATTTGCTGACCTGTTT  366
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  296  GCCACCCCTTCATCAAGACTGTGGGCATGGTGGCTGGAGATGAGGAGACCTATGAGGTATTTGCTGAACTGTTT  369

Query  367  GACCCTGTGATCCAAGAGCGACACAATGGATATGACCCCCGGACAATGAAGCACACCACGGATCTAGATGCCAG  440
            ||||||||||||||||||||.||.|||||||||||||||.|.|||||||||||||||||.||.||.||||||||
Sbjct  370  GACCCTGTGATCCAAGAGCGGCATAATGGATATGACCCCAGAACAATGAAGCACACCACTGACCTTGATGCCAG  443

Query  441  TAAAATCCGTTCTGGCTACTTTGATGAGAGGTATGTATTGTCCTCTAGAGTCAGAACTGGCCGAAGCATCCGAG  514
            ||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.|||.|.|
Sbjct  444  TAAAATCCGTTCTGGCTACTTTGATGAGAGGTATGTATTGTCTTCAAGAGTCAGAACTGGCCGAAGTATCAGGG  517

Query  515  GACTCAGTCTGCCTCCAGCTTGCACTCGAGCAGAGCGACGAGAGGTGGAACGTGTTGTGGTGGATGCACTGAGT  588
            ||||||||||.||||||||.||||||||.|||||||||.|||||||.||||||||||||||||||||.||||||
Sbjct  518  GACTCAGTCTCCCTCCAGCCTGCACTCGGGCAGAGCGAAGAGAGGTAGAACGTGTTGTGGTGGATGCTCTGAGT  591

Query  589  GGCCTGAAGGGTGACCTGGCTGGACGTTACTATAGGCTCAGTGAGATGACAGAGGCTGAACAGCAGCAGCTTAT  662
            ||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct  592  GGCCTGAAGGGTGACCTGGCTGGACGGTACTATAGGCTCAGTGAGATGACGGAGGCCGAACAGCAGCAGCTTAT  665

Query  663  TGATGACCACTTTCTGTTTGATAAGCCTGTGTCCCCGTTGCTGACTGCAGCAGGAATGGCTCGAGACTGGCCAG  736
            |||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.|
Sbjct  666  TGATGACCATTTTCTGTTTGATAAACCTGTGTCCCCATTGCTGACTGCAGCAGGAATGGCTCGAGACTGGCCTG  739

Query  737  ATGCTCGTGGAATTTGGCACAACAATGAGAAGAGCTTCCTGATCTGGGTGAATGAGGAGGATCATACACGGGTG  810
            |||||||.||.||.||||||||||||||||||||.|||.||||||||||||||||||||||.||.||||||||.
Sbjct  740  ATGCTCGAGGGATCTGGCACAACAATGAGAAGAGTTTCTTGATCTGGGTGAATGAGGAGGACCACACACGGGTC  813

Query  811  ATCTCCATGGAGAAGGGTGGTAACATGAAGAGAGTGTTTGAAAGATTCTGCCGAGGCCTCAAAGAGGTGGAGAG  884
            |||||.||||||||.||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||||.
Sbjct  814  ATCTCTATGGAGAAAGGCGGCAACATGAAGAGAGTGTTTGAAAGATTCTGCCGGGGCCTCAAAGAGGTGGAGAA  887

Query  885  ACTTATCCAAGAACGTGGCTGGGAGTTCATGTGGAATGAGCGTTTGGGATACATCTTGACCTGTCCATCTAACC  958
            .||.|||||.|||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||
Sbjct  888  GCTGATCCAGGAACGAGGCTGGGAGTTCATGTGGAATGAGCGTTTAGGCTACATCTTGACCTGTCCATCTAACC  961

Query  959  TGGGCACTGGACTTCGGGCAGGAGTGCACATCAAACTGCCCCTGCTAAGCAAAGATAGCCGCTTCCCAAAGATC  1032
            |||||||||||||||||||||||||.||||||||||||||.|||||.||||||||||.||||||||||||||||
Sbjct  962  TGGGCACTGGACTTCGGGCAGGAGTCCACATCAAACTGCCACTGCTGAGCAAAGATAACCGCTTCCCAAAGATC  1035

Query 1033  CTGGAGAACCTAAGACTCCAAAAACGTGGTACTGGAGGAGTGGACACTGCTGCTACAGGCGGTGTCTTTGATAT  1106
            |||||||||||||||||.|||||.|||||.|||||||||||||||||.|||||.||||||.|.||||||||.||
Sbjct 1036  CTGGAGAACCTAAGACTGCAAAAGCGTGGAACTGGAGGAGTGGACACAGCTGCCACAGGCAGCGTCTTTGACAT  1109

Query 1107  TTCTAATTTGGACCGACTAGGCAAATCAGAGGTGGAGCTGGTGCAACTGGTCATCGATGGAGTAAACTATTTGA  1180
            .|||||||||||.|||||.|||||.||||||||||||||||||||.||.|||||||||||.||.||||||||||
Sbjct 1110  CTCTAATTTGGATCGACTTGGCAAGTCAGAGGTGGAGCTGGTGCAGCTCGTCATCGATGGGGTGAACTATTTGA  1183

Query 1181  TTGATTGTGAACGGCGTCTGGAGAGAGGCCAGGATATCCGCATCCCCACACCTGTCATCCACACCAAGCAT  1251
            ||||.|||||||||||||||||||||||.||||||||.||.|||||..|||||.|..||||||.|||.|||
Sbjct 1184  TTGACTGTGAACGGCGTCTGGAGAGAGGACAGGATATTCGAATCCCTCCACCTCTTGTCCACAGCAAACAT  1254

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