Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00411
- Subject:
- XM_017012544.1
- Aligned Length:
- 1517
- Identities:
- 917
- Gaps:
- 445
Alignment
Query 1 ATGGCTCTCATCCCAGACTTGGCCATGGAAACCTGGCTTCTCCTGGCTGTCAGCCTGGTGCTCCTCTATCTATA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGAACCCATTCACATGGACTTTTTAAGAAGCTTGGAATTCCAGGGCCCACACCTCTGCCTTTTTTGGGAAATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTTTGTCCTACCATAAGGGCTTTTGTATGTTTGACATGGAATGTCATAAAAAGTATGGAAAAGTGTGGGGCTTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TATGATGGTCAACAGCCTGTGCTGGCTATCACAGATCCTGACATGATCAAAACAGTGCTAGTGAAAGAATGTTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TTCTGTCTTCACAAACCGGAGGCCTTTTGGTCCAGTGGGATTTATGAAAAGTGCCATCTCTATAGCTGAGGATG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGAATGGAAGAGATTACGATCATTGCTGTCTCCAACCTTCACCAGTGGAAAACTCAAGGAGATGGTCCCTATC 444
||||||||.|||
Sbjct 1 --------------------------------------------------------------ATGGTCCCCATC 12
Query 445 ATTGCCCAGTATGGAGATGTGTTGGTGAGAAATCTGAGGCGGGAAGCAGAG-ACAGGCAAGCCTGTCACCTTGA 517
|||.||||.|.|||||||.||||||||||||..|||||||.|||||||||| ||| |||||.|..|||.|||||
Sbjct 13 ATTTCCCAATGTGGAGATATGTTGGTGAGAAGCCTGAGGCAGGAAGCAGAGAACA-GCAAGTCCATCAACTTGA 85
Query 518 AAGACGTCTTTGGGGCCTACAGCATGGATGTGATCACTAGCACATCATTTGGAGTGAACATCGACTCTCTCAAC 591
||||..|||||||||||||||.|||||||||.||||||.||||||.|||||||||||||.|.||.|||||||||
Sbjct 86 AAGATTTCTTTGGGGCCTACACCATGGATGTAATCACTGGCACATTATTTGGAGTGAACTTGGATTCTCTCAAC 159
Query 592 AATCCACAAGACCCCTTTGTGGAAAACACCAAGAAGCTTTTAAGATTTGATTTTTTGGATCCATTCTTTCTCTC 665
|||||||||||.||||||.||.||||.|..|||||||||||||.|||.||||||||||||||.||.||.||||.
Sbjct 160 AATCCACAAGATCCCTTTCTGAAAAATATGAAGAAGCTTTTAAAATTGGATTTTTTGGATCCCTTTTTACTCTT 233
Query 666 AATAACAGTCTTTCCATTCCTCATCCCAATTCTTGAAGTATTAAATATCTGTGTGTTTCCAAGAGAAGTTACAA 739
||||.||.||||||||||.||.|.||||.||.||||||...||||||||.||.|||||||||.|||.|||||..
Sbjct 234 AATATCACTCTTTCCATTTCTTACCCCAGTTTTTGAAGCCCTAAATATCGGTTTGTTTCCAAAAGATGTTACCC 307
Query 740 ATTTTTTAAGAAAATCTGTAAAAAGGATGAAAGAAAGTCGCCTCGAAGATACACAAAAGCACCGAGTGGATTTC 813
|||||||||.|||.||..|..|||||||||||||||||||||||.||||||.|||||||||.|||||.||||||
Sbjct 308 ATTTTTTAAAAAATTCCATTGAAAGGATGAAAGAAAGTCGCCTCAAAGATAAACAAAAGCATCGAGTAGATTTC 381
Query 814 CTTCAGCTGATGATTGACTCTCAGAATTCAAAAGAAACTGAGTCCCACAAAGCTCTGTCCGATCTGGAGCTCGT 887
.||||.|.||||||.|||||.||||||||.||||||||..|||||||.|||||||||||.|||||||||||.||
Sbjct 382 TTTCAACAGATGATCGACTCCCAGAATTCCAAAGAAACAAAGTCCCATAAAGCTCTGTCTGATCTGGAGCTTGT 455
Query 888 GGCCCAATCAATTATCTTTATTTTTGCTGGCTATGAAACCACGAGCAGTGTTCTCTCCTTCATTATGTATGAAC 961
||||||.|||||||||.|.||||||||||.||||||.||.||.||||....||||.||||||||||||||||||
Sbjct 456 GGCCCAGTCAATTATCATCATTTTTGCTGCCTATGACACAACTAGCACCACTCTCCCCTTCATTATGTATGAAC 529
Query 962 TGGCCACTCACCCTGATGTCCAGCAGAAACTGCAGGAGGAAATTGATGCAGTTTTACCCAATAAGGCACCACCC 1035
||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||...|
Sbjct 530 TGGCCACTCACCCTGATGTCCAGCAGAAACTGCAGGAGGAGATTGACGCAGTTTTACCCAATAAGGCACCTGTC 603
Query 1036 ACCTATGATACTGTGCTACAGATGGAGTATCTTGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAATTGC 1109
|||||.|||.|..||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||.|||.
Sbjct 604 ACCTACGATGCCCTGGTACAGATGGAGTACCTTGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAGTTGT 677
Query 1110 TATGAGACTTGAGAGGGTCTGCAAAAAAGATGTTGAGATCAATGGGATGTTCATTCCCAAAGGGGTGGTGGTGA 1183
||..|||.||..|||.||||||||.||||||.||||.||||||||..|||||||||||||||||.|.|..||||
Sbjct 678 TAGTAGAGTTACGAGAGTCTGCAAGAAAGATATTGAAATCAATGGAGTGTTCATTCCCAAAGGGTTAGCAGTGA 751
Query 1184 TGATTCCAAGCTATGCTCTTCACCGTGACCCAAAGTACTGGACAGAGCCTGAGAAGTTCCTCCCTGAA---AGA 1254
||.||||||.||||||||||||||.||||||||||||||||||||||||||||||||||..||||||| ||.
Sbjct 752 TGGTTCCAATCTATGCTCTTCACCATGACCCAAAGTACTGGACAGAGCCTGAGAAGTTCTGCCCTGAAAGTAGG 825
Query 1255 TTCAGCAAGAAGAACAAGGACAACATAGATCCTTACATATACACACCCTTTGGAAGTGGACCCAGAAACTGCAT 1328
|||||.||||||||||||||||.||||||||.|||||.|||||.|||.||||||..|||||||.||||||||||
Sbjct 826 TTCAGTAAGAAGAACAAGGACAGCATAGATCTTTACAGATACATACCTTTTGGAGCTGGACCCCGAAACTGCAT 899
Query 1329 TGGCATGAGGTTTGCTCTCATGAACATGAAACTTGCTCTAATCAGAGTCCTTCAGAACTTCTCCTTCAAACCTT 1402
||||||||||||||||||||..|||||.|||||||||.|.||.||||..||.||||||||||||||||||||||
Sbjct 900 TGGCATGAGGTTTGCTCTCACAAACATAAAACTTGCTGTCATTAGAGCACTGCAGAACTTCTCCTTCAAACCTT 973
Query 1403 GTAAAGAAACACAGATCCCCCTGAAATT----AAGCTTAGGAGGACTTCTTCAACCAGAAAAACCCGTTGTTCT 1472
|||||||.||.||||||||.|||||||| ||.|| |..|.|||||||||||||||||||..|||||||
Sbjct 974 GTAAAGAGACTCAGATCCCACTGAAATTAGACAATCT----ACCAATTCTTCAACCAGAAAAACCTATTGTTCT 1043
Query 1473 AAAGGTTGAGTCAAGGGATGGCACCGTAAGTGGAGCC 1509
|||.||..|.|.|||.|||||.|....|||||||.||
Sbjct 1044 AAAAGTGCACTTAAGAGATGGGATTACAAGTGGACCC 1080