Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00499
- Subject:
- NM_001322265.1
- Aligned Length:
- 1228
- Identities:
- 554
- Gaps:
- 602
Alignment
Query 1 ATGGAGAGTGCAATCACGCTGTGGCAGTTCCTGTTGCAGTTGCTGCTGGATCAGAAACATGAGCATTTGATCTG 74
||||||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||||||||..|.|||||
Sbjct 1 ATGGAGAGTGCAATCACGCTGTGGCAGTTCCTCTTGCACTTGCTGCTGGACCAGAAACATGAGCACCTCATCTG 74
Query 75 CTGGACCTCGAACGATGGTGAATTCAAGCTCCTCAAAGCAGAAGAAGTGGCCAAGCTGTGGGGACTCCGAAAAA 148
||||||.|||||||||||.||.||||||||||||||.||.|||||||||||||||||||||||.|||||.||.|
Sbjct 75 CTGGACATCGAACGATGGCGAGTTCAAGCTCCTCAAGGCGGAAGAAGTGGCCAAGCTGTGGGGCCTCCGCAAGA 148
Query 149 ACAAAACAAATATGAACTATGATAAGCTGAGCAGAGCCCTGCGATACTATTATGACAAGAACATCATCAAGAAG 222
||||.||.||.||||||||.||.||||||||||||||.|||.||||||||||.||||||||||||||||||||.
Sbjct 149 ACAAGACCAACATGAACTACGACAAGCTGAGCAGAGCGCTGAGATACTATTACGACAAGAACATCATCAAGAAA 222
Query 223 GTGATCGGGCAGAAGTTTGTGTACAAGTTTGTCTCTTTCCCGGAGATCCTGAAGATGGATCCTCACGCGGTGGA 296
|||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||||||||||.||
Sbjct 223 GTGATCGGGCAGAAGTTTGTGTACAAGTTCGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGA 296
Query 297 GATCAGCCGGGAGAGCCTTCTGCTGCAGGACAGCGACTGCAAGGCGTCTCCGGAGGGCCGCGAGGCCCACAAAC 370
||||||||||||||||||.||||||||||||.|||||||.||||.|||.|||||.|||||.||||.|||||..|
Sbjct 297 GATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGAGGTCCACAGGC 370
Query 371 ACGGCCTGGCCGCCCTCAGAAGCACGAGCCGCAACGAATACATCCACTCAGGCCTGTACTCGTCCTTCACCATT 444
|||||.||.||.|.||||.|||..|.|||||||||||.|||.|||||||.|||||.|||||||||||||||||.
Sbjct 371 ACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGGCCTCTACTCGTCCTTCACCATC 444
Query 445 AATTCCCTGCAGAACCCACCAGACGCCTTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCGCCCGAAGACAG 518
||.||||||||||||.|.|||||.||||||||||||||||||||||||||||||||||||||....||.|||||
Sbjct 445 AACTCCCTGCAGAACGCTCCAGAGGCCTTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCCTGTGATGACAG 518
Query 519 CCCCCCCGTGGAAGAAGTCAGGACTGTGATCAGGTTTGTGACCAATAAAACCGACAAGCACGTCACCAGGCCGG 592
.|||||.||||||||||||||||||||||||| |.|||||
Sbjct 519 TCCCCCTGTGGAAGAAGTCAGGACTGTGATCA-----------------------------GACACCA------ 557
Query 593 TGGTGTCCCTGCCTTCCACGTCAGAGG-CTGCGGCGGCGTCCGCCTTCCTGGCCTCGTCCGTCTCGGCCAAGAT 665
||.|| ||| ||.||||||||| ||
Sbjct 558 ----------------------AGTGGACTG--------------TTTCTGGCCTCG-------------AG-- 580
Query 666 CTCCTCTTTAATGTTGCCAAACGCTG-CCAGTATTTCATCCGCCTCACCCTTCT----CA-TCTCGGTCCCCGT 733
|||.|| |||| ||||.|| ||.||||| || .||..||
Sbjct 581 -TCCGCT---------------GCTGCCCAGCAT------------ACACTTCTGGAGCAGCCTTAGT------ 620
Query 734 CCCTGTCCCCCAACTCACCCCTCCCTTCTGAACACAGAAGCCTCTTCCTGGAGGCCGCCTGCCATGACTCCGAT 807
||||||.|||.||
Sbjct 621 -CCTGTCGCCCCAC------------------------------------------------------------ 633
Query 808 TCCCTGGAGCCCTTGAACCTGTCATCGGGCTCCAAGACCAAGTCTCCATCTCTTCCCCCAAAGGCCAAAAAACC 881
Sbjct 634 -------------------------------------------------------------------------- 633
Query 882 CAAAGGCTTGGAAATCTCAGCGCCCCCGCTGGTGCTCTCCGGCACCGACATCGGCTCCATCGCCCTCAACAGCC 955
Sbjct 634 -------------------------------------------------------------------------- 633
Query 956 CAGCCCTCCCCTCGGGATCCCTCACCCCAGCCTTCTTCACCGCACAGACACCAAATGGATTGCTTCTGACTCCG 1029
Sbjct 634 -------------------------------------------------------------------------- 633
Query 1030 AGTCCACTGCTCTCCAGCATACATTTCTGGAGCAGCCTTAGTCCAGTTGCTCCGCTGAGTCCTGCCAGGCTGCA 1103
Sbjct 634 -------------------------------------------------------------------------- 633
Query 1104 AGGGCCAAGCACGCTGTTCCAGTTCCCCACACTGCTTAATGGCCACATGCCAGTGCCAATCCCCAGTCTGGACA 1177
Sbjct 634 -------------------------------------------------------------------------- 633
Query 1178 GAGCTGCTTCTCCAGTACTGCTTTCTTCAAACTCTCAGAAATCC 1221
Sbjct 634 -------------------------------------------- 633
