Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00591
- Subject:
- NR_027436.2
- Aligned Length:
- 3841
- Identities:
- 577
- Gaps:
- 3246
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCAGCGTTTGGGTGAAGACGGAGGCGGGTTCTGGACAGACGTACGCTGTCAGGGAGTGTTTACTTTGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTCTGTTCCTCCCCGCCCTGGTGCTGCTCCGGGTCACATACTCGTCCTGAGCCGGCTTCAGCCTCTCCGCGC 148
Query 1 -----------------ATGGCCGAGTACTCCTACGTGAAGTCTACCAAGCTCGTGCTCAAGGGAACCAAGACG 57
||||||||||||||.||.|.|||||||||||||||.|||||||||||||||||||||
Sbjct 149 AGAAGTGTCCCGGAGCCATGGCCGAGTACTCTTATGCGAAGTCTACCAAGCTTGTGCTCAAGGGAACCAAGACG 222
Query 58 AAGA---------------------------------------------------------------------- 61
||||
Sbjct 223 AAGAGGTGGGTCCTGCACCTCCGGCGGGAGCCTCCTCAGTTCTTTTCGGACGCACTCCACCCCCCTCGAATCCG 296
Query 62 -------------------------------------------------------------------------- 61
Sbjct 297 GTGGAAGCCGTGGCGCGGAGAGCCGGCTTTGTGGCCTCCCAGGCTTCGCCCTGGCCCCTGTCCGGGCTGGACGG 370
Query 62 -------------------------------------------------------------------------- 61
Sbjct 371 AGGCCGGACCGCAGTTCCTGGCGCCTGTGCAGAGAGGGGCAGCCTCCCGCACTGACGACCCTGGAAACAGGATA 444
Query 62 ------------------------------------------------------------------------GT 63
||
Sbjct 445 GACGGGCGGGTGACCCGTGGCCCCGTACCCACGAGTTTCAGTCCTCTGAGGCATCTCTGCAGGCCTCTGCCTGT 518
Query 64 AAGAAGAAAAAGAGCAAAGATAAGAAAAGAAAAAGAGAAGAAGATGAAGAAACCCAGCTTGATATTGTTGGAAT 137
||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||.|||||| |||||||||
Sbjct 519 AAGAAGAAAAAGAGCAAAGAGAAGAAGAGAAAAAGAGAAGAAGATGAAGAAACCCAGTTTGATA-TGTTGGAAT 591
Query 138 CTGGTGGACAGTAACAAACTTTGGTGAAATTTCAGGAACCATAGCCATTGAAATGGATAAGGGAACCTATATAC 211
||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 592 CTGGTGAACAGTAACAAACTTTGATGAAATTTCAGGAACCATAGCCATTGAAATGGATGAGGGAACCTATATAC 665
Query 212 ATGCACTCGACAATGGTCTTTTTACCCTGGGAGCTCCACACAAAGAAGTTGATGAGGGCCCTAGTCCTCCAGAG 285
||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 ATCCACTCGACAATGGTCTTTTTACCCTGGGAGCTCCACACAAAGAAG-------------------------- 713
Query 286 CAGTTTACGGCTGTCAAATTATCTGATTCCAGAATCGCCCTGAAGTCTGGCTATGGAAAATATCTTGGTATAAA 359
Sbjct 714 -------------------------------------------------------------------------- 713
Query 360 TTCAGATGGACTTGTTGTTGGGCGTTCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAATG 433
|
Sbjct 714 -------------------------------------------------------------------------G 714
Query 434 GGAAAATGGCTTTGTTGGCCTCAAATAGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGT 507
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 715 GGAAAATGGCTTTGTTGGCCTCAAATGGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGT 788
Query 508 AAAACAGCAGGAGAAGAAGAAATGATCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACAT 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 AAAACAGCAGGAGAAGAAGAAATGATCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACAT 862
Query 582 TCCAGAAGAAGACAAAGGAAATGTAAAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGACC 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 863 TCCAGAAGAAGACAAAGGAAATGTAAAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGAGC 936
Query 656 ACAAACTTAAAATAAGTAAAGAAGACAGTAAAATTCTTAAAAAGGCTCGGAAAGATGGATTTTTGCATGAGACG 729
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.||||||
Sbjct 937 ACAAACTTAAAATAAGTAAAGAAGACAGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCAAGAGACG 1010
Query 730 CTTCTGGACA--------------------------------------------------GGAGAGCCAAATTG 753
|||||||||| ||||.||| |||
Sbjct 1011 CTTCTGGACAGAGTCGCAGTCATAGCCTGCCTTCATCTCTGAAGGGACCAGGTAACACACGGAGTGCC---TTG 1081
Query 754 AAAGCC------------------------GACAGAT-----ACTGCAAG------------------------ 774
..|||| |||| || ||||| ||
Sbjct 1082 GCAGCCTCGTCATTGCATGCAATCTTCACAGACA-ATATCTCACTGC-AGCCACCTTTCTACAGGAGTACAGGT 1153
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1154 GTGACATTATACTGATGACATCATTCTCAGAGAAAATTCATTTTACACACTGAAGATACACAGACACAAAGAGC 1227
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1228 CTTATACAAAGGGAATGGACCTTTCCCCAACACAGTAGTGCAAGGCCCTGCCACTTTGCTTCAATTCCTGAAAA 1301
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1302 TTCCTTGGTAAACTTGGGGCTGCTCTATTCCTGACAGTTTCAAGAAATAGTTATTCATCCTCTCAGCATCCACA 1375
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1376 ACGTTAATACAAGCCCAACATTCTTTAATTTGTGTTTTGTTTTTTGGAGACATAGTCTTGCTCTGTCACACAGG 1449
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1450 CTGGTATGAAGTGGCATGATCTCAGCTCACTGCAGCCTTGACCTCCCAACCTCAAGCAATTCTCCCATTTCAGC 1523
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1524 TTTCCAAGTAGCTAGGACTACAGGTGTGTGCCATGACACTCAGCTAATTTTGTTTATTTTTTTGTAGAGAAAAG 1597
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1598 CTCTCGCTATGTTACCCGGGCTGGTCTCGAACTCCTGGGCTCAAGAGATCCTCTGGCCTCGGCCTCCCAAAGTT 1671
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1672 CTGGGATTACAGGTGTGAGTCCATGTGCCCAGCCCTTTAATTCTTTACTTGGGGTTCAGGTGACTACACATTTC 1745
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1746 TTACTTACAAATTTTACTTAATCTCGCTGATGCTGTCACTTGAAAGCTGACCCACCTTGAATGAAGCCTCCTCC 1819
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1820 AACAAGTCTGGAATCCATCCGAATTTAAATTAACAGGCGCTCCTATGAATTCCATCAGAGAACACACTGTAGAT 1893
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1894 GCTTTAGCAACCTCTTCCCATGCCTCCGAAGTATCTGGTTTGCATGTGGTGGCCATTAGTCATCCATGGGCTTC 1967
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1968 TGATGTAAAAAACAAACCTGCCTCTTTTGACCCTGTGCTGTACAGCATCAGGGCAGTGATTGCTGGCCACATAC 2041
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2042 TGGACCCTTGAAACAGAGGGCTCTGCATCCATGTCCATGAGCCTTCATGCCCATCTGGCCATCAGGCCTTGGGA 2115
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2116 AGCAGCACCCCACAGCTTTGGCACAGCTGCAGTGACCTCCTTGCCTCCGAATGGAGTCAAATCTTTACACGATG 2189
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2190 CAATTCTCATCTGCAGGAAGCACTGGCCTCCTTCATCCTTAGGCTACAGTGCTGACACTGGCCTCCTTCATCCT 2263
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2264 CAGACTGTGGTGCCAGATGTCACCCCTCTGCGAGGCCCTTGGGATCGACTGAGTGACCAGCAGTGAAGTTTGTC 2337
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2338 AGCCTTCTGAATGGATGCCATGATCAGATGTGATGGAGCTCAGTGGGATTCTGCTGCTTTCCCTCCCTTAGCTA 2411
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2412 GGATGTCCCTGATAAAGGATGACACACAAGCCTCAGCACAACTGGCCAAACTTGAGGTGGTCATCATAGCACTG 2485
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2486 ATGCTGGGCCAACAATTAACCCCACTTGTACCTTTTTACAAACTTTTTGACAATTGCCAAGAATTGTCCAGCTT 2559
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2560 CCCTCCCCATTGAATTAAATACACTTCTTGTCTCATGGATACTCAGAATACCAATCAAGGTAACAGATGCCTTT 2633
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2634 ATTTTAACTAAGGACACGGTACAGATCTCACAGGGACACTCCTTATCCCTTGCAGAGTTCCAGACACTACTGAT 2707
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2708 GGTCACCAAAGCAACATTTCATCAGAAAACACAGTGCTGGGCTTGTGAAGAAGGTGTCCAGCAGAGCTTCCACT 2781
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2782 GCTCCTGTAGGCTGCAGGAAGCTGCTTCAGTTGAGAGATACACTGAGCTCCTCAAAGAATTCCTATTTAAGGTA 2855
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2856 CAAAGCAGCGAGTGGATGCCCTGCTGGATTCCACTATTGCCACAGGCTTTGATAACTCTAAGTTCATGCTCCTT 2929
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2930 AGGAAAGTGCACTTTTTACACCAATGCTAGACAGTTCCCTCAGTTGCCTTTACTGGACATCAAGGAGTTCACAT 3003
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3004 TTTTGACAATCTTTCAGTCCTGAACTGTCCAAGGGGTGGAGGTAGCTCCATACAGGAAGCTGCCTGCTGCGTGT 3077
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3078 GGATCAGTAATATCAGACTTGCCCAACAGCTCACTGGAGACATGAAAACCCATGCATGGGGGATGCATGACGTC 3151
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3152 ACCCAAATATTTACCACACGCTTGTGCTGCCAGAGACCCCAGATCACTTTTCCTGCCTCCTGCTAAACAAATGG 3225
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3226 GAGCAGTAGCTTCTCATCAGCCTCCACATTTCATTACTCATAATTGTGGCCTTCCTAATGTCTCATGCCCCTAA 3299
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3300 GCATTTATTACAATGTCTCAACAGCCTTCTCTCAGCCTCTCAAAATATTAGTCATCATTAAAATAAATGTCTGA 3373
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3374 TGTTAAAGCATCAGGGTCAATTGTACTGTGACACCTAAAATTTCATGCTGCATCCCACCAGGTCCTCAGCCTAA 3447
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3448 TGGCTTTCATGCCCCCAACAGACTGCTAAACTCTTTGAATTAGTCAAGCACATCCCTCAAGGGACAAGGGGTTA 3521
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3522 CCCCACCCTCTGATTTCTACCAAGCCTGCCTCCCGCACCCTGTGCTCCAGAGTGAACCCCCGGGTAGACCTGCA 3595
Query 775 ------------------------------------------------------------------- 774
Sbjct 3596 CAGATGCAGTGTCATCCCCTGTTGGGCTGAGTATGCGCGATGAATAAGTTACGGTGAATTTCGTCTA 3662
