Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00591
- Subject:
- NR_145491.1
- Aligned Length:
- 3356
- Identities:
- 681
- Gaps:
- 2656
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCCCCCCTCCCGGCAGAAACCTGGAAGTGGAAATCTCGGGCATTCACCGTTTGGGTGAAGACGGAGGCGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGGACAGACGTAGGCTGTCAGGGAGTGTTTACTTCGCCTCCACTTCTGTTCCTCCCTGCCCTGGTGCTGCTC 148
Query 1 ------------------------------------------------------------ATGGCCGAGTACTC 14
||||||.|||||||
Sbjct 149 CAGGTCACATACTCGTCCTGAGCCGGCTTCAGCCTGTCCGCGCAGAAGTCTCCCGGAGCCATGGCCTAGTACTC 222
Query 15 CTACGTGAAGTCTACCAAGCTCGTGCTCAAGGGAACCAAGACGAAGAGTAAGAAGAAAAAGAGCAAAGATAAGA 88
.||.||||||||||.|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 223 TTATGTGAAGTCTAGCAAGCTCGTGCTCAAGGGAACC--------GAGTAAGAAGAAAAAGAGCAAAGATAAGA 288
Query 89 AAAGAAAAAGAGAAGAAGATGAAGAAACCCAGCTTGATATTGTTGGAATCTGGTGGACAGTAACAAACTTTGGT 162
|.|||||||| |||||||||||||||||||||||||| .||||||||||||||.||||||||||||||||||
Sbjct 289 AGAGAAAAAG---AGAAGATGAAGAAACCCAGCTTGATA-CGTTGGAATCTGGTGAACAGTAACAAACTTTGGT 358
Query 163 GAAATTTCAGGAACCATAGCCATTGAAATGGATAAGGGAACCTATATACATGCACTCGACAATGGTCTTTTTAC 236
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 359 GAAATTTCAGGAACCATAGCCATTGAAATGGATGAGGGAACCTATATACATGCACTCGACAATGGTCTTTTTAC 432
Query 237 CCTGGGAGCTCCACACAAAGAAGTTGATGAGGGCCCTAGTCCTCCAGAGCAGTTTACGGCTGTCAAATTATCTG 310
|||||||||||||||||||||
Sbjct 433 CCTGGGAGCTCCACACAAAGA----------------------------------------------------- 453
Query 311 ATTCCAGAATCGCCCTGAAGTCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGGACTTGTTGTTGGGCGT 384
||||||||||||||.|||||||||||||||||||||||||||||||||||||.|| |||||||||.|
Sbjct 454 -----AGAATCGCCCTGAAATCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGAAC---TTGTTGGGCAT 519
Query 385 TCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAATGGGAAAATGGCTTTGTTGGCCTCAAA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 TCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAATGGGAAAATGGCTTTGTTGGCCTCAAA 593
Query 459 TAGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGA 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 594 TAGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGA 667
Query 533 TCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTA 606
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 668 TCAAGATTAGATCCTGTGCTGAAAAAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTA 741
Query 607 AAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAGA 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 742 AAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAGA 815
Query 681 CAGTAAAATTCTTAAAAAGGCTCGGAAAGATGGATTTTTGCATGAGACGCTTCTGGACAGGAG----AGCCAAA 750
.||||||||||||||||||||||.||||||||||||||||||||||||||||||||||| ||| ||.||.|
Sbjct 816 GAGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCATGAGACGCTTCTGGACA-GAGTCTCAGTCATA 888
Query 751 --------------TTGAA------AGCCGAC------------------------------------------ 762
.|||| ||.||||
Sbjct 889 GCCTGCCTTCATCTCTGAAGGGACCAGGCGACCCATGGAGTGCCTCGGCAGCCTCGTCATTGCATGCAATCTTC 962
Query 763 -------AGAT---ACTGCAAG---------------------------------------------------- 774
|||| |||||||.
Sbjct 963 ACAGACAAGATCTCACTGCAACCACGTTTCTACAGGAGCACAGGTGTGACATTATACTGATGACATCATTCTCA 1036
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1037 GAGAAAATTCATTTTACATACTAAGGACACACAGATACAAGGAGGCTTACACAAAGGGAGTGGACCTCTCCTCA 1110
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1111 ACACAGTAGTGCAAGGCCCTGCCACTTTGCTTCAATTCCTGAAAATTCCTTGGTAAACTTGGGGCTGCTCTATT 1184
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1185 CCTGACACTTTCAAAAAACAGTTATTCATCCTCTCAGCATCCACAATGTTAATACAAACCCAACATTCTTCAAT 1258
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1259 TTGTGTTTTGTTTTTTGGAGGCACAGTCTTGCTCTGTCACCCAGGCTGGTATGAAGTGGCACAATTTCAGCTCA 1332
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1333 CTGCAGCCTCGACCTCCTGAGCTCAAGCAATTCTCCCATCTCGGCCTTCCAAGTAGCTCGGACTGCAAGTGTGT 1406
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1407 GCCACGACACTCAGCTAATTTTGTTTAATTTTTTGTAGAGAAAAGGTCTCGCTATGTTACCCAGGCTGGTCTCA 1480
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1481 AACTCCTGGGCTGAAGGGATCCTCTTGCTTCAGCCTCCCAAAGTTCTGGGGTTACAGTTGTGAGCCACTGTGCC 1554
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1555 CAGCCCTTTAATTCTTTACTTGGGGTTCAGGTGACAACATATTTCTTGTTTACAAATCTTACTTAATCTCACTG 1628
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1629 ATGCTGTCATTGGCAAACTGACCCACCTCGAATGAAGCCTCCTCCAACAAGTCTGGAATCTGTCCAAATTTAAA 1702
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1703 TTAACAGGTACTTCTATGAATTCCCTCAGAGAACACACTGTGGATGCTTTAGAGACCTCTTCCCATGCATCCTG 1776
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1777 AATTATCTGGGTTGCATATGGTGGCCATAAGTAGTCCATGGGCTTCTGATGTAAAAACAAACCTGCCCCTTTTG 1850
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1851 ACCCTGCTCTGTACAGCATCAGGGCAGTGATTGCTGACCATATCCTGGACCCTCTGGAAACAGAGGGCTCTGCA 1924
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1925 TCCATGTCCATGAGCCTTCATGCCCATCTGGCCATCAGGCCTTGGGAAGCAGCACCCCACAGCCTTGGCACAGC 1998
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1999 TGCAGAGACCTCCTTGCCTCAGGATGGAGTCAAACCTGGACCCCCTGCCATTCTCATCTGCAGGAAACACTGCC 2072
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2073 CTCCTTCATTCTCAGGCTGTGTTGCTGGAAGTCACCCGTCTCCGAGGACCCTTGGGATCGACTGAGTGACCAGC 2146
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2147 AGTGAAGTTCATCCACCTTCTGAATGGATGCCATCATCTGACATGATGGAGCGCAGTGGGATGCTGCTGCCTTC 2220
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2221 CCTCCCTTAGCTAGGATGTCCCTGATAAAGGATGACACCCAAGCCTCAGCACAACTGGCCAAACTTGAGGTGGT 2294
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2295 CATCTCAGCACTGATGCTGGGCCAACAATTAGCCCCATTTGTACATTTTTACAAATTTTTGGCAATTGTCAAGA 2368
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2369 ATTGTCCACCTTCCCTCCCCATTGAATTAAAGAAACTTCTTGCCTCATGGATACTCAGAATACAATCAAGGTAA 2442
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2443 CAGATGCCTTTTTTTTTAACCAAGGACACAGTACAGATCTCACAGGGACACTCCTTATCTCCTGCAGAGTTCCA 2516
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2517 GACACTACTGATGGTGACCAAGGCAACATTCATCGGAAAACACAGTGCTAGGCTTGTGAAAGTGTCCAGTAGGG 2590
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2591 CTTCCACTGCCCCTATAGGCTGCAGGCAGCTGCTTTAGTTGAGAGAGAGACTGAGCTCCTCAAAGAATTCCTAT 2664
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2665 TTAAGTTACAAAGCAGCGAGTGGATGCCCTGCTGGGTTCCACTGTTGCCACAGGCTTTGATTACTCTAAGTTCA 2738
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2739 TGCTTCTTAGGAAAGTGCACTTTTTACACCAACGCTACACAGTTCCCTCAGTTGCCTTTACTGGACATCAAGGA 2812
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2813 GTTCACATTTTTGACAACCATTCAGTCCTGGACTGTCCAAGGGGTGGAGGTAGCTCCGTACAGGAAGCTGCCTG 2886
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2887 CTGCGTGTGGATCAGTAATATCAGACTTGCCCAACAACTCACTGGAGACATGAAAATCAATGCATGGGGTTGCA 2960
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2961 TGATATCACCCAAATATTTATGAAAACACTTGTGTGGCCAGAGACCCCAGATATCTAAACCAAAGCATGGGGAA 3034
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3035 TGCATGACATCACCCAAATATTTACGAACATGCTTGTGCTGCCAGAGACCCCAGATCACTTTCCCTGCCTCCTG 3108
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3109 CTAAATAAATGGGGGTCGTAGCTTTGCATTGGCTTCCACATTACATTACTCATAACTGTGGCCTTCCTAATCTC 3182
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3183 TCATGTCCCTAAGCACTTATTATAATGTCTCAGCAGCTTTCAGCCTCTCAAAATATTAGTCATCATGAAAATAA 3256
Query 775 -------------------------- 774
Sbjct 3257 ATGTCTGATATTAAAAAAAAAAAAAA 3282
