Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00615
Subject:
NR_152150.2
Aligned Length:
1114
Identities:
608
Gaps:
460

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTCTCTGCTCCTCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGCCAGCCGAGCCACATCGCTCAGACA  74

Query    1  --ATGGGGAAGGTGAAGGTCGGAGTCAACGGATTTGGTCGTATTGGGCGCCTGGTCACCAGGGCTGCTTTTAAC  72
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCATGGGGAAGGTGAAGGTCGGAGTCAACGGATTTGGTCGTATTGGGCGCCTGGTCACCAGGGCTGCTTTTAAC  148

Query   73  TCTGGTAAAGTGGATATTGTTGCCATCAATGACCCCTTCATTGACCTCAACTACATGGTTTACATGTTCCAATA  146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCTGGTAAAGTGGATATTGTTGCCATCAATGACCCCTTCATTGACCTCAACTACATGGTTTACATGTTCCAATA  222

Query  147  TGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCA  220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCA  296

Query  221  TCACCATCTTCCAGGAGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCC  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCACCATCTTCCAGGAGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCC  370

Query  295  ACTGGCGTCTTCACCACCATGGAGAAGGCTGGGGCTCATTTGCAGGGGGGAGCCAAAAGGGTCATCATCTCTGC  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACTGGCGTCTTCACCACCATGGAGAAGGCTGGGGCTCATTTGCAGGGGGGAGCCAAAAGGGTCATCATCTCTGC  444

Query  369  CCCCTCTGCTGATGCCCCCATGTTCGTCATGGGTGTGAACCATGAGAAGTATGACAACAGCCTCAAGATCAT--  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||  ||  
Sbjct  445  CCCCTCTGCTGATGCCCCCATGTTCGTCATGGGTGTGAACCATGAGAAGTATGACAAC--------GA--ATTT  508

Query  441  -----CAGCAATGCCTCCTGCACCACCAACTGCTTAGCACCCCTGGCCAAGGTCATCCATGACAACTTTGGTAT  509
                 ||||||                                    ||.||                ||||  
Sbjct  509  GGCTACAGCAA------------------------------------CAGGG----------------TGGT--  528

Query  510  CGTGGAAGGA-CTCATGACCACAGTCCATGCCATCACTGCCACCCAG----AAGACTGTGGATGGCCCCTCCGG  578
                   ||| ||||||.|| ||   ||||        |||.||.||    ||||          |||||   |
Sbjct  529  -------GGACCTCATGGCC-CA---CATG--------GCCTCCAAGGAGTAAGA----------CCCCT---G  570

Query  579  GAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACATCATCCCTGCCTCTACTGGCGCTGCCAAGGCTGTGG  652
            ||                            |||          ||.|||             |||         
Sbjct  571  GA----------------------------CCA----------CCAGCC-------------CCA---------  584

Query  653  GCAAGGTCATCCCTGAGCTGAACGGGAAG---------CTCACTGGCATGGCCTTCCGTGTCCCCACTGCCA-A  716
            ||||          ||||..||..|||||         |||||||       ||...|.||||   |||||| |
Sbjct  585  GCAA----------GAGCACAAGAGGAAGAGAGAGACCCTCACTG-------CTGGGGAGTCC---CTGCCACA  638

Query  717  CGTGTCAGTGGTGGACCTGAC-----CTGCCGTCTAGAAAAACCTGCCAAATATGATGACATCAAGAAGGTGG-  784
            |   |||||.....|||..||     ||.||.|         |||..||     |.||.|||       ||.| 
Sbjct  639  C---TCAGTCCCCCACCACACTGAATCTCCCCT---------CCTCACA-----GTTGCCAT-------GTAGA  688

Query  785  -----TGAAGCAGGCGTCGGAGGGCCCCCTCAAGGGCATCCTGGGCTACACTGAGCACCAGGTGGTCTCCTCTG  853
                 ||||| |||    ||||||.|    |.|||| |.||             |||||     .|.||.|.|.
Sbjct  689  CCCCTTGAAG-AGG----GGAGGGGC----CTAGGG-AGCC-------------GCACC-----TTGTCATGTA  734

Query  854  ACTTCAACAGCGACACCCACTCCTCCACCTTTGACGCTGGGGCTGGCATTGCCCTCAACGACCACTTTGTCAAG  927
            .|.||||.|..| .||||..|.|||.|||.                                            
Sbjct  735  CCATCAATAAAG-TACCCTGTGCTCAACCA--------------------------------------------  763

Query  928  CTCATTTCCTGGTATGACAACGAATTTGGCTACAGCAACAGGGTGGTGGACCTCATGGCCCACATGGCCTCCAA  1001
                                                                                      
Sbjct  764  --------------------------------------------------------------------------  763

Query 1002  GGAG  1005
                
Sbjct  764  ----  763

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