Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00650
• Subject: NM_002072.5
• Aligned Length: 1084
• Identities: 852
• Gaps: 14

Alignment

Query    1  ATGACTCTGGAGTCCATGATGGCGTGTTGCCTGAGCGATGAGGTGAAGGAGTCCAAGCGGATCAACGCCGAGAT  74
            |||||||||||||||||.||||||||.|||||||||||.||||..|||||..||..|||||||||||.||||||
Sbjct    1  ATGACTCTGGAGTCCATCATGGCGTGCTGCCTGAGCGAGGAGGCCAAGGAAGCCCGGCGGATCAACGACGAGAT  74

Query   75  CGAGAAGCAGCTGCGGCGGGACAAGCGCGACGCCCGGCGCGAGCTCAAGCTGCTGCTGCTCGGCACGGGCGAGA  148
            ||||..||||||.||..||||||||||.||||||||.||.|||||||||||||||||||||||.||.||.||||
Sbjct   75  CGAGCGGCAGCTCCGCAGGGACAAGCGGGACGCCCGCCGGGAGCTCAAGCTGCTGCTGCTCGGGACAGGAGAGA  148

Query  149  GCGGGAAGAGCACGTTCATCAAGCAGATGCGCATCATCCACGGCGCCGGCTACTCGGAGGAGGACAAGCGCGGC  222
            |.||.|||||.|||||.||||||||||||.|.||||||||.||..|.||.|||||.||.||.||.||..|.|||
Sbjct  149  GTGGCAAGAGTACGTTTATCAAGCAGATGAGAATCATCCATGGGTCAGGATACTCTGATGAAGATAAAAGGGGC  222

Query  223  TTCACCAAGCTCGTCTACCAGAACATCTTCACCGCCATGCAGGCCATGATCCGGGCCATGGAGACGCTCAAGAT  296
            |||||||||||.||.||.||||||||||||||.||||||||||||||||||.|.||||||||.||.||||||||
Sbjct  223  TTCACCAAGCTGGTGTATCAGAACATCTTCACGGCCATGCAGGCCATGATCAGAGCCATGGACACACTCAAGAT  296

Query  297  CCTCTACAAGTACGAGCAGAACAAGGCCAATGCGCTCCTGATCCGGGAGGTGGACGTGGAGAAGGTGACCACCT  370
            ||..||||||||.|||||.||.|||||..||||.|...|..|.||.||.||.||.||||||||||||.|..|.|
Sbjct  297  CCCATACAAGTATGAGCACAATAAGGCTCATGCACAATTAGTTCGAGAAGTTGATGTGGAGAAGGTGTCTGCTT  370

Query  371  TCGAGCATCAGTACGTCAG-TGCCATCAAGACCCTGTGGGAGGACCCGGGCATCCAGGAATGCTACGACCGCAG  443
            |.|||.|||..||.|| || |||.||.||||...|.|||.|.||.||.||.||||||||||||||.||..|..|
Sbjct  371  TTGAGAATCCATATGT-AGATGCAATAAAGAGTTTATGGAATGATCCTGGAATCCAGGAATGCTATGATAGACG  443

Query  444  GCGCGAGTACCAGCTCTCCGACTCTGCCAAGTACTACCTGACCGACGTTGACCGCATCGC-CACCTTGGGCTAC  516
            .||.||.||.||..|.||.||||||.||||.|||||.||.|..|||.|.||||||.|.|| .|||.| |.||||
Sbjct  444  ACGAGAATATCAATTATCTGACTCTACCAAATACTATCTTAATGACTTGGACCGCGTAGCTGACCCT-GCCTAC  516

Query  517  CTGCCCACCCAGCAGGACGTGCTGCGGGTCCGCGTGCCCACCACCGGCATCATCGAGTACCCTTTCGACCTGGA  590
            |||||.||.||.||.||.|||||..|.||.||.||.||||||||.||.||||||||.|||||.||.|||.|   
Sbjct  517  CTGCCTACGCAACAAGATGTGCTTAGAGTTCGAGTCCCCACCACAGGGATCATCGAATACCCCTTTGACTT---  587

Query  591  GAACA-----TCATCTTCCGGATGGTGGATGTGGGGGGCCAGCGGTCGGAGCGGAGGAAGTGGATCCACTGCTT  659
              |||     ||||.|||.|.|||||.|||||.||||||||..||||.|||.|.||.||.|||||.||||||||
Sbjct  588  --ACAAAGTGTCATTTTCAGAATGGTCGATGTAGGGGGCCAAAGGTCAGAGAGAAGAAAATGGATACACTGCTT  659

Query  660  TGAGAACGTGACATCCATCATGTTTCTCGTCGCCCTCAGCGAATACGACCAAGTCCTGGTGGAGTCGGACAACG  733
            |||.||.||.||.||.|||||||||||.||.||.||.||.|||||.||.|||||.||.||||||||.|||||.|
Sbjct  660  TGAAAATGTCACCTCTATCATGTTTCTAGTAGCGCTTAGTGAATATGATCAAGTTCTCGTGGAGTCAGACAATG  733

Query  734  AGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACCATCATCACCTACCCCTGGTTCCAGAACTCCTCCGTC  807
            |||||||.||||||||.|||||.||.||.||..|.||.||.|||||.|||||||||||||||||||||||.||.
Sbjct  734  AGAACCGAATGGAGGAAAGCAAGGCTCTCTTTAGAACAATTATCACATACCCCTGGTTCCAGAACTCCTCGGTT  807

Query  808  ATCCTCTTCCTCAACAAGAAGGACCTGCTGGAGGACAAGATCCTGTACTCGCACCTGGTGGACTACTTCCCCGA  881
            ||.||.|||.|.||||||||.||.||.||.|||||.||.|||.||||.||.||.||.||.|||||||||||.||
Sbjct  808  ATTCTGTTCTTAAACAAGAAAGATCTTCTAGAGGAGAAAATCATGTATTCCCATCTAGTCGACTACTTCCCAGA  881

Query  882  GTTCGATGGTCCCCAGCGGGACGCCCAGGCGGCGCGGGAGTTCATCCTGAAGATGTTCGTGGACCTGAACCCCG  955
            .|..|||||.||||||.|.||.||||||||.||.||.||.|||||.||||||||||||||||||||||||||.|
Sbjct  882  ATATGATGGACCCCAGAGAGATGCCCAGGCAGCCCGAGAATTCATTCTGAAGATGTTCGTGGACCTGAACCCAG  955

Query  956  ACAGCGACAAGATCATCTACTCACACTTCACGTGTGCCACCGACACGGAGAACATCCGCTTCGTGTTCGCGGCC  1029
            ||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|||||.||||||||.||.||.||.|||
Sbjct  956  ACAGTGACAAAATTATCTACTCCCACTTCACGTGCGCCACAGACACCGAGAATATCCGCTTTGTCTTTGCTGCC  1029

Query 1030  GTGAAGGACACCATCCTGCAGCTCAACCTCAAGGAGTACAACCTGGTC  1077
            ||.||||||||||||||.|||.|.|||||.|||||||||||.||||||
Sbjct 1030  GTCAAGGACACCATCCTCCAGTTGAACCTGAAGGAGTACAATCTGGTC  1077